Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27160 and BWI76_RS27165 are separated by 127 nucleotides BWI76_RS27165 and BWI76_RS27170 overlap by 4 nucleotides BWI76_RS27170 and BWI76_RS27175 overlap by 12 nucleotides
BWI76_RS27160: BWI76_RS27160 - PTS mannitol transporter subunit IICBA, at 5,638,012 to 5,639,922
_RS27160
BWI76_RS27165: BWI76_RS27165 - mannitol-1-phosphate 5-dehydrogenase, at 5,640,050 to 5,641,198
_RS27165
BWI76_RS27170: BWI76_RS27170 - MltR family transcriptional regulator, at 5,641,195 to 5,641,791
_RS27170
BWI76_RS27175: BWI76_RS27175 - hypothetical protein, at 5,641,780 to 5,642,004
_RS27175
Position (kb)
5640
5641
5642 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5639.292 kb on + strand, within BWI76_RS27160 at 5639.421 kb on + strand, within BWI76_RS27160 at 5639.483 kb on + strand, within BWI76_RS27160 at 5639.491 kb on - strand, within BWI76_RS27160 at 5639.585 kb on - strand, within BWI76_RS27160 at 5639.617 kb on + strand at 5639.625 kb on - strand, within BWI76_RS27160 at 5639.661 kb on - strand, within BWI76_RS27160 at 5639.666 kb on - strand, within BWI76_RS27160 at 5639.899 kb on + strand at 5639.899 kb on + strand at 5639.958 kb on + strand at 5639.978 kb on - strand at 5639.983 kb on + strand at 5639.984 kb on + strand at 5639.990 kb on - strand at 5639.994 kb on + strand at 5640.014 kb on - strand at 5640.225 kb on - strand, within BWI76_RS27165 at 5640.335 kb on + strand, within BWI76_RS27165 at 5640.444 kb on - strand, within BWI76_RS27165 at 5640.523 kb on - strand, within BWI76_RS27165 at 5640.613 kb on + strand, within BWI76_RS27165 at 5640.621 kb on - strand, within BWI76_RS27165 at 5640.621 kb on - strand, within BWI76_RS27165 at 5640.621 kb on - strand, within BWI76_RS27165 at 5640.686 kb on + strand, within BWI76_RS27165 at 5640.990 kb on - strand, within BWI76_RS27165 at 5640.996 kb on + strand, within BWI76_RS27165 at 5641.215 kb on + strand at 5641.434 kb on + strand, within BWI76_RS27170 at 5641.487 kb on + strand, within BWI76_RS27170 at 5641.495 kb on - strand, within BWI76_RS27170 at 5641.538 kb on - strand, within BWI76_RS27170 at 5641.549 kb on + strand, within BWI76_RS27170 at 5641.567 kb on + strand, within BWI76_RS27170 at 5641.570 kb on + strand, within BWI76_RS27170 at 5641.664 kb on + strand, within BWI76_RS27170 at 5641.705 kb on + strand, within BWI76_RS27170 at 5641.736 kb on - strand at 5641.736 kb on - strand at 5641.798 kb on - strand at 5641.839 kb on + strand, within BWI76_RS27175 at 5641.840 kb on - strand, within BWI76_RS27175 at 5641.889 kb on + strand, within BWI76_RS27175 at 5641.941 kb on - strand, within BWI76_RS27175 at 5642.008 kb on + strand at 5642.008 kb on + strand at 5642.011 kb on + strand at 5642.011 kb on + strand at 5642.013 kb on + strand at 5642.016 kb on - strand at 5642.016 kb on - strand at 5642.018 kb on + strand at 5642.019 kb on - strand at 5642.019 kb on - strand at 5642.019 kb on - strand at 5642.023 kb on + strand at 5642.031 kb on - strand at 5642.039 kb on + strand at 5642.085 kb on + strand at 5642.159 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 5,639,292 + BWI76_RS27160 0.67 -0.5 5,639,421 + BWI76_RS27160 0.74 +0.9 5,639,483 + BWI76_RS27160 0.77 +0.4 5,639,491 - BWI76_RS27160 0.77 +0.4 5,639,585 - BWI76_RS27160 0.82 -1.1 5,639,617 + +2.7 5,639,625 - BWI76_RS27160 0.84 +1.7 5,639,661 - BWI76_RS27160 0.86 +0.4 5,639,666 - BWI76_RS27160 0.87 +0.2 5,639,899 + -0.2 5,639,899 + +0.4 5,639,958 + +1.7 5,639,978 - +0.1 5,639,983 + +0.3 5,639,984 + -1.5 5,639,990 - -0.4 5,639,994 + -0.5 5,640,014 - +1.7 5,640,225 - BWI76_RS27165 0.15 -1.3 5,640,335 + BWI76_RS27165 0.25 -1.4 5,640,444 - BWI76_RS27165 0.34 -0.1 5,640,523 - BWI76_RS27165 0.41 -1.1 5,640,613 + BWI76_RS27165 0.49 +1.3 5,640,621 - BWI76_RS27165 0.50 -1.4 5,640,621 - BWI76_RS27165 0.50 -0.8 5,640,621 - BWI76_RS27165 0.50 -1.4 5,640,686 + BWI76_RS27165 0.55 +1.7 5,640,990 - BWI76_RS27165 0.82 -2.1 5,640,996 + BWI76_RS27165 0.82 +0.4 5,641,215 + -0.4 5,641,434 + BWI76_RS27170 0.40 -3.2 5,641,487 + BWI76_RS27170 0.49 -1.3 5,641,495 - BWI76_RS27170 0.50 -3.7 5,641,538 - BWI76_RS27170 0.57 -1.8 5,641,549 + BWI76_RS27170 0.59 +0.7 5,641,567 + BWI76_RS27170 0.62 -1.7 5,641,570 + BWI76_RS27170 0.63 -1.3 5,641,664 + BWI76_RS27170 0.79 -2.4 5,641,705 + BWI76_RS27170 0.85 -1.3 5,641,736 - -1.6 5,641,736 - -1.8 5,641,798 - +0.7 5,641,839 + BWI76_RS27175 0.26 -1.3 5,641,840 - BWI76_RS27175 0.27 -0.3 5,641,889 + BWI76_RS27175 0.48 -0.5 5,641,941 - BWI76_RS27175 0.72 -0.5 5,642,008 + +0.0 5,642,008 + +1.0 5,642,011 + -0.1 5,642,011 + -0.3 5,642,013 + -0.4 5,642,016 - +0.5 5,642,016 - +1.3 5,642,018 + +0.5 5,642,019 - +0.3 5,642,019 - -0.6 5,642,019 - -0.3 5,642,023 + +0.1 5,642,031 - +0.8 5,642,039 + +0.9 5,642,085 + +0.1 5,642,159 - +0.6
Or see this region's nucleotide sequence