Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25955 and BWI76_RS25960 are separated by 196 nucleotides BWI76_RS25960 and BWI76_RS25965 are separated by 81 nucleotides
BWI76_RS25955: BWI76_RS25955 - ribose-phosphate pyrophosphokinase, at 5,366,330 to 5,367,199
_RS25955
BWI76_RS25960: BWI76_RS25960 - NUDIX hydrolase, at 5,367,396 to 5,368,115
_RS25960
BWI76_RS25965: BWI76_RS25965 - hydrolase, at 5,368,197 to 5,369,219
_RS25965
Position (kb) 5367
5368
5369 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5366.453 kb on + strand at 5366.499 kb on - strand, within BWI76_RS25955 at 5366.516 kb on + strand, within BWI76_RS25955 at 5366.521 kb on + strand, within BWI76_RS25955 at 5366.522 kb on + strand, within BWI76_RS25955 at 5366.564 kb on - strand, within BWI76_RS25955 at 5366.619 kb on - strand, within BWI76_RS25955 at 5366.624 kb on - strand, within BWI76_RS25955 at 5366.705 kb on - strand, within BWI76_RS25955 at 5366.760 kb on + strand, within BWI76_RS25955 at 5366.782 kb on + strand, within BWI76_RS25955 at 5366.782 kb on + strand, within BWI76_RS25955 at 5366.788 kb on - strand, within BWI76_RS25955 at 5366.790 kb on - strand, within BWI76_RS25955 at 5366.876 kb on + strand, within BWI76_RS25955 at 5367.144 kb on + strand at 5367.392 kb on + strand at 5367.392 kb on + strand at 5367.485 kb on + strand at 5367.493 kb on - strand, within BWI76_RS25960 at 5367.603 kb on + strand, within BWI76_RS25960 at 5367.739 kb on + strand, within BWI76_RS25960 at 5367.800 kb on - strand, within BWI76_RS25960 at 5367.877 kb on + strand, within BWI76_RS25960 at 5367.900 kb on + strand, within BWI76_RS25960 at 5367.914 kb on - strand, within BWI76_RS25960 at 5367.963 kb on - strand, within BWI76_RS25960 at 5368.096 kb on - strand at 5368.122 kb on + strand at 5368.130 kb on - strand at 5368.197 kb on + strand at 5368.640 kb on - strand, within BWI76_RS25965 at 5368.806 kb on + strand, within BWI76_RS25965 at 5368.858 kb on + strand, within BWI76_RS25965 at 5368.937 kb on - strand, within BWI76_RS25965 at 5368.937 kb on - strand, within BWI76_RS25965 at 5369.035 kb on - strand, within BWI76_RS25965
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 5,366,453 + +0.6 5,366,499 - BWI76_RS25955 0.19 +0.4 5,366,516 + BWI76_RS25955 0.21 -0.4 5,366,521 + BWI76_RS25955 0.22 +0.6 5,366,522 + BWI76_RS25955 0.22 -1.4 5,366,564 - BWI76_RS25955 0.27 -0.4 5,366,619 - BWI76_RS25955 0.33 -0.2 5,366,624 - BWI76_RS25955 0.34 +0.4 5,366,705 - BWI76_RS25955 0.43 -0.5 5,366,760 + BWI76_RS25955 0.49 -0.7 5,366,782 + BWI76_RS25955 0.52 -0.2 5,366,782 + BWI76_RS25955 0.52 +0.6 5,366,788 - BWI76_RS25955 0.53 +0.0 5,366,790 - BWI76_RS25955 0.53 +0.5 5,366,876 + BWI76_RS25955 0.63 -0.5 5,367,144 + +0.1 5,367,392 + -0.3 5,367,392 + +0.6 5,367,485 + -0.4 5,367,493 - BWI76_RS25960 0.13 -3.6 5,367,603 + BWI76_RS25960 0.29 -0.9 5,367,739 + BWI76_RS25960 0.48 -2.1 5,367,800 - BWI76_RS25960 0.56 -1.3 5,367,877 + BWI76_RS25960 0.67 -2.2 5,367,900 + BWI76_RS25960 0.70 -1.0 5,367,914 - BWI76_RS25960 0.72 -1.8 5,367,963 - BWI76_RS25960 0.79 -0.4 5,368,096 - -1.0 5,368,122 + +1.0 5,368,130 - -0.4 5,368,197 + +0.0 5,368,640 - BWI76_RS25965 0.43 +0.5 5,368,806 + BWI76_RS25965 0.60 +0.1 5,368,858 + BWI76_RS25965 0.65 -0.0 5,368,937 - BWI76_RS25965 0.72 -0.4 5,368,937 - BWI76_RS25965 0.72 +0.8 5,369,035 - BWI76_RS25965 0.82 +0.3
Or see this region's nucleotide sequence