Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06725 and BWI76_RS06730 are separated by 269 nucleotides BWI76_RS06730 and BWI76_RS06735 are separated by 111 nucleotides BWI76_RS06735 and BWI76_RS06740 overlap by 1 nucleotides BWI76_RS06740 and BWI76_RS06745 overlap by 4 nucleotides
BWI76_RS06725: BWI76_RS06725 - maltoporin, at 1,411,076 to 1,412,347
_RS06725
BWI76_RS06730: BWI76_RS06730 - lac repressor, at 1,412,617 to 1,413,690
_RS06730
BWI76_RS06735: BWI76_RS06735 - 50S ribosomal protein L31, at 1,413,802 to 1,414,065
_RS06735
BWI76_RS06740: BWI76_RS06740 - 50S ribosomal protein L36, at 1,414,065 to 1,414,205
_RS06740
BWI76_RS06745: BWI76_RS06745 - N-acetyltransferase GCN5, at 1,414,202 to 1,414,900
_RS06745
Position (kb)
1412
1413
1414 Strain fitness (log2 ratio)
-2
-1
0
1 at 1411.656 kb on + strand, within BWI76_RS06725 at 1411.732 kb on + strand, within BWI76_RS06725 at 1411.733 kb on + strand, within BWI76_RS06725 at 1411.733 kb on - strand, within BWI76_RS06725 at 1411.748 kb on + strand, within BWI76_RS06725 at 1411.761 kb on - strand, within BWI76_RS06725 at 1411.806 kb on - strand, within BWI76_RS06725 at 1411.999 kb on + strand, within BWI76_RS06725 at 1412.142 kb on - strand, within BWI76_RS06725 at 1412.221 kb on + strand at 1412.229 kb on - strand at 1412.267 kb on - strand at 1412.300 kb on - strand at 1412.300 kb on - strand at 1412.697 kb on - strand at 1413.248 kb on + strand, within BWI76_RS06730 at 1413.536 kb on - strand, within BWI76_RS06730 at 1413.592 kb on + strand at 1413.622 kb on + strand at 1413.657 kb on + strand at 1413.657 kb on + strand at 1413.665 kb on - strand at 1413.907 kb on + strand, within BWI76_RS06735 at 1414.080 kb on + strand, within BWI76_RS06740 at 1414.090 kb on + strand, within BWI76_RS06740 at 1414.169 kb on + strand, within BWI76_RS06740 at 1414.533 kb on + strand, within BWI76_RS06745 at 1414.656 kb on + strand, within BWI76_RS06745
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 1,411,656 + BWI76_RS06725 0.46 -0.3 1,411,732 + BWI76_RS06725 0.52 +0.9 1,411,733 + BWI76_RS06725 0.52 +0.3 1,411,733 - BWI76_RS06725 0.52 +1.0 1,411,748 + BWI76_RS06725 0.53 +0.2 1,411,761 - BWI76_RS06725 0.54 -0.1 1,411,806 - BWI76_RS06725 0.57 -1.2 1,411,999 + BWI76_RS06725 0.73 -0.0 1,412,142 - BWI76_RS06725 0.84 -0.1 1,412,221 + +1.0 1,412,229 - +0.5 1,412,267 - +0.1 1,412,300 - +0.2 1,412,300 - +0.4 1,412,697 - -1.4 1,413,248 + BWI76_RS06730 0.59 -1.5 1,413,536 - BWI76_RS06730 0.86 -0.8 1,413,592 + -1.9 1,413,622 + -0.8 1,413,657 + -1.2 1,413,657 + -0.5 1,413,665 - -2.4 1,413,907 + BWI76_RS06735 0.40 -0.1 1,414,080 + BWI76_RS06740 0.11 -0.4 1,414,090 + BWI76_RS06740 0.18 +0.5 1,414,169 + BWI76_RS06740 0.74 -0.1 1,414,533 + BWI76_RS06745 0.47 -0.6 1,414,656 + BWI76_RS06745 0.65 -0.1
Or see this region's nucleotide sequence