Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5970

Experiment: pyrophosphate 0.0025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyrophosphate 0.0025 M
6,788,336	+		Pf6N2E2_5969	0.40	-0.4
6,788,337	-		Pf6N2E2_5969	0.40	-0.6
6,788,405	+		Pf6N2E2_5969	0.44	+0.8
6,788,405	+		Pf6N2E2_5969	0.44	+0.3
6,788,406	-		Pf6N2E2_5969	0.44	+0.1
6,788,489	+		Pf6N2E2_5969	0.50	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	+0.8
6,788,489	+		Pf6N2E2_5969	0.50	+1.0
6,788,489	+		Pf6N2E2_5969	0.50	-0.8
6,788,489	+		Pf6N2E2_5969	0.50	+0.6
6,788,489	+		Pf6N2E2_5969	0.50	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	+0.4
6,788,489	+		Pf6N2E2_5969	0.50	-0.6
6,788,489	+		Pf6N2E2_5969	0.50	-0.3
6,788,489	+		Pf6N2E2_5969	0.50	+1.8
6,788,489	+		Pf6N2E2_5969	0.50	-1.1
6,788,489	+		Pf6N2E2_5969	0.50	-0.1
6,788,489	+		Pf6N2E2_5969	0.50	+0.5
6,788,489	+		Pf6N2E2_5969	0.50	+0.1
6,788,489	+		Pf6N2E2_5969	0.50	-0.8
6,788,489	+		Pf6N2E2_5969	0.50	+0.2
6,788,489	+		Pf6N2E2_5969	0.50	-0.4
6,788,489	+		Pf6N2E2_5969	0.50	+1.2
6,788,489	+		Pf6N2E2_5969	0.50	+0.6
6,788,489	+		Pf6N2E2_5969	0.50	+0.5
6,788,489	+		Pf6N2E2_5969	0.50	+0.6
6,788,489	+		Pf6N2E2_5969	0.50	-0.5
6,788,489	+		Pf6N2E2_5969	0.50	+1.2
6,788,489	+		Pf6N2E2_5969	0.50	+0.5
6,788,489	+		Pf6N2E2_5969	0.50	-0.5
6,788,489	+		Pf6N2E2_5969	0.50	+0.1
6,788,490	-		Pf6N2E2_5969	0.50	+0.7
6,788,490	-		Pf6N2E2_5969	0.50	-0.9
6,788,490	-		Pf6N2E2_5969	0.50	+0.5
6,788,490	-		Pf6N2E2_5969	0.50	+0.3
6,788,490	-		Pf6N2E2_5969	0.50	-0.3
6,788,490	-		Pf6N2E2_5969	0.50	+1.6
6,788,490	-		Pf6N2E2_5969	0.50	+0.5
6,788,490	-		Pf6N2E2_5969	0.50	-2.4
6,788,490	-		Pf6N2E2_5969	0.50	-0.1
6,788,490	-		Pf6N2E2_5969	0.50	-0.9
6,788,490	-		Pf6N2E2_5969	0.50	+0.3
6,788,490	-		Pf6N2E2_5969	0.50	-2.1
6,788,490	-		Pf6N2E2_5969	0.50	-0.9
6,788,490	-		Pf6N2E2_5969	0.50	+0.6
6,788,490	-		Pf6N2E2_5969	0.50	-0.2
6,788,490	-		Pf6N2E2_5969	0.50	-0.5
6,788,490	-		Pf6N2E2_5969	0.50	-0.2
6,788,490	-		Pf6N2E2_5969	0.50	-0.4
6,788,490	-		Pf6N2E2_5969	0.50	-0.6
6,788,496	-		Pf6N2E2_5969	0.50	+0.8
6,788,939	+		Pf6N2E2_5969	0.79	-0.1
6,788,939	+		Pf6N2E2_5969	0.79	-0.0
6,788,939	+		Pf6N2E2_5969	0.79	-0.4
6,788,939	+		Pf6N2E2_5969	0.79	+0.5
6,788,940	-		Pf6N2E2_5969	0.79	+0.5
6,788,940	-		Pf6N2E2_5969	0.79	+0.4
6,788,940	-		Pf6N2E2_5969	0.79	-1.4
6,788,940	-		Pf6N2E2_5969	0.79	-1.9
6,788,940	-		Pf6N2E2_5969	0.79	+0.2
6,789,022	+		Pf6N2E2_5969	0.84	+0.8
6,789,022	+		Pf6N2E2_5969	0.84	-0.1
6,789,059	+		Pf6N2E2_5969	0.87	-0.9
6,789,059	+		Pf6N2E2_5969	0.87	-0.1
6,789,060	-		Pf6N2E2_5969	0.87	-1.9
6,789,270	+				+2.2
6,789,270	+				-0.6
6,789,270	+				-0.6
6,789,270	+				-2.1
6,789,271	-				-0.7
6,789,271	-				+0.2
6,789,480	+		Pf6N2E2_5970	0.21	+0.3
6,789,480	+		Pf6N2E2_5970	0.21	-0.7
6,789,480	+		Pf6N2E2_5970	0.21	+0.1
6,789,481	-		Pf6N2E2_5970	0.21	+0.8
6,789,481	-		Pf6N2E2_5970	0.21	-0.3
6,789,481	-		Pf6N2E2_5970	0.21	+0.2
6,789,481	-		Pf6N2E2_5970	0.21	+1.2
6,789,481	-		Pf6N2E2_5970	0.21	+0.1
6,789,481	-		Pf6N2E2_5970	0.21	-1.4
6,789,671	+		Pf6N2E2_5970	0.41	-0.6
6,789,711	+		Pf6N2E2_5970	0.45	+1.6
6,789,711	+		Pf6N2E2_5970	0.45	-0.2
6,789,711	+		Pf6N2E2_5970	0.45	-0.9
6,789,712	-		Pf6N2E2_5970	0.45	+0.3
6,789,712	-		Pf6N2E2_5970	0.45	+0.5
6,789,712	-		Pf6N2E2_5970	0.45	-0.9
6,789,728	+		Pf6N2E2_5970	0.47	+0.2
6,789,849	+		Pf6N2E2_5970	0.59	+1.5
6,789,849	+		Pf6N2E2_5970	0.59	-1.8
6,789,849	+		Pf6N2E2_5970	0.59	+1.4
6,789,849	+		Pf6N2E2_5970	0.59	-0.9
6,789,850	-		Pf6N2E2_5970	0.59	+0.6
6,789,850	-		Pf6N2E2_5970	0.59	+1.1
6,789,850	-		Pf6N2E2_5970	0.59	-0.3
6,789,858	+		Pf6N2E2_5970	0.60	+0.1
6,789,858	+		Pf6N2E2_5970	0.60	-0.2
6,789,859	-		Pf6N2E2_5970	0.60	+1.6
6,789,859	-		Pf6N2E2_5970	0.60	+0.9
6,789,952	+		Pf6N2E2_5970	0.70	+0.6
6,789,952	+		Pf6N2E2_5970	0.70	+0.2
6,790,176	+				+1.4
6,790,176	+				+0.5
6,790,176	+				-0.2
6,790,176	+				+0.9
6,790,177	-				-1.8
6,790,177	-				-1.5
6,790,177	-				+0.5
6,790,182	+				+1.0
6,790,182	+				-1.1
6,790,182	+				-1.5
6,790,182	+				-1.4
6,790,182	+				-0.2
6,790,183	-				+0.1
6,790,183	-				+1.9
6,790,183	-				+1.6
6,790,275	+				-0.1
6,790,275	+				-0.1
6,790,275	+				+0.6
6,790,276	-				-2.4
6,790,276	-				+0.8
6,790,276	-				+1.6
6,790,276	-				+1.3
6,790,276	-				+0.6
6,790,436	+		Pf6N2E2_5971	0.10	-0.1
6,790,436	+		Pf6N2E2_5971	0.10	-1.7
6,790,436	+		Pf6N2E2_5971	0.10	+0.1
6,790,436	+		Pf6N2E2_5971	0.10	+0.0
6,790,437	-		Pf6N2E2_5971	0.10	+1.1
6,790,437	-		Pf6N2E2_5971	0.10	+0.2
6,790,708	+		Pf6N2E2_5971	0.81	-1.3
6,790,708	+		Pf6N2E2_5971	0.81	-1.6
6,790,708	+		Pf6N2E2_5971	0.81	+0.4
6,790,708	+		Pf6N2E2_5971	0.81	+0.1
6,790,709	-		Pf6N2E2_5971	0.82	+0.1
6,790,709	-		Pf6N2E2_5971	0.82	+1.0
6,790,709	-		Pf6N2E2_5971	0.82	+0.4
6,790,709	-		Pf6N2E2_5971	0.82	+0.0
6,790,709	-		Pf6N2E2_5971	0.82	-0.5
6,790,753	+				+1.3
6,790,753	+				-0.4
6,790,753	+				+0.6
6,790,754	-				-0.4
6,790,754	-				+0.5
6,790,754	-				-0.6
6,790,754	-				-2.1
6,790,813	-				-1.9
6,790,869	-		Pf6N2E2_5972	0.17	+0.2
6,790,869	-		Pf6N2E2_5972	0.17	-1.2
6,790,909	+		Pf6N2E2_5972	0.28	-0.6
6,790,910	-		Pf6N2E2_5972	0.29	-1.2
6,790,910	-		Pf6N2E2_5972	0.29	-2.4