Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4014

Experiment: pyrophosphate 0.0025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyrophosphate 0.0025 M
4,685,315	+		Pf6N2E2_4013	0.49	-1.3
4,685,315	+		Pf6N2E2_4013	0.49	-1.2
4,685,316	-		Pf6N2E2_4013	0.49	+0.4
4,685,316	-		Pf6N2E2_4013	0.49	+0.3
4,685,316	-		Pf6N2E2_4013	0.49	-1.2
4,685,316	-		Pf6N2E2_4013	0.49	+0.0
4,685,316	-		Pf6N2E2_4013	0.49	-1.3
4,685,316	-		Pf6N2E2_4013	0.49	+0.2
4,685,316	-		Pf6N2E2_4013	0.49	-0.6
4,685,316	-		Pf6N2E2_4013	0.49	-0.2
4,685,319	+		Pf6N2E2_4013	0.49	-1.6
4,685,319	+		Pf6N2E2_4013	0.49	-0.1
4,685,319	+		Pf6N2E2_4013	0.49	-0.8
4,685,319	+		Pf6N2E2_4013	0.49	-1.1
4,685,319	+		Pf6N2E2_4013	0.49	-1.9
4,685,319	+		Pf6N2E2_4013	0.49	-0.4
4,685,319	+		Pf6N2E2_4013	0.49	-0.5
4,685,319	+		Pf6N2E2_4013	0.49	-3.1
4,685,319	+		Pf6N2E2_4013	0.49	-0.4
4,685,320	-		Pf6N2E2_4013	0.49	-0.6
4,685,320	-		Pf6N2E2_4013	0.49	-1.6
4,685,320	-		Pf6N2E2_4013	0.49	-0.9
4,685,320	-		Pf6N2E2_4013	0.49	-0.8
4,685,320	-		Pf6N2E2_4013	0.49	+0.2
4,685,320	-		Pf6N2E2_4013	0.49	-1.8
4,685,339	+		Pf6N2E2_4013	0.51	-0.7
4,685,451	+		Pf6N2E2_4013	0.60	+0.1
4,685,488	+		Pf6N2E2_4013	0.63	-1.1
4,685,500	-		Pf6N2E2_4013	0.64	-2.3
4,685,500	-		Pf6N2E2_4013	0.64	-0.9
4,685,706	+		Pf6N2E2_4013	0.80	-2.9
4,685,706	+		Pf6N2E2_4013	0.80	+0.4
4,685,706	+		Pf6N2E2_4013	0.80	-0.4
4,685,715	+		Pf6N2E2_4013	0.80	-0.4
4,685,929	+				+1.3
4,685,930	-				+0.4
4,685,966	+				-1.7
4,685,967	-				-1.3
4,686,012	+				-1.7
4,686,012	+				-0.4
4,686,012	+				+0.0
4,686,012	+				-1.0
4,686,012	+				-1.8
4,686,013	-				+0.1
4,686,013	-				+0.4
4,686,013	-				-0.1
4,686,013	-				-0.2
4,686,013	-				-0.2
4,686,013	-				+0.1
4,686,013	-				-0.2
4,686,013	-				-0.7
4,686,013	-				+0.1
4,686,013	-				+0.6
4,686,013	-				-1.0
4,686,158	+				-1.2
4,686,158	+				-1.3
4,686,159	-				-0.6
4,686,159	-				-1.6
4,686,159	-				-0.3
4,686,159	-				+1.0
4,686,159	-				-0.3
4,686,174	-				-1.6
4,686,188	+				+0.4
4,686,188	+				-0.6
4,686,332	+		Pf6N2E2_4014	0.13	-0.8
4,686,332	+		Pf6N2E2_4014	0.13	+0.2
4,686,332	+		Pf6N2E2_4014	0.13	-0.1
4,686,332	+		Pf6N2E2_4014	0.13	-1.2
4,686,332	+		Pf6N2E2_4014	0.13	-1.8
4,686,333	-		Pf6N2E2_4014	0.13	-2.3
4,686,333	-		Pf6N2E2_4014	0.13	-1.3
4,686,333	-		Pf6N2E2_4014	0.13	-0.2
4,686,333	-		Pf6N2E2_4014	0.13	-1.0
4,686,333	-		Pf6N2E2_4014	0.13	-1.0
4,686,333	-		Pf6N2E2_4014	0.13	-0.2
4,686,338	+		Pf6N2E2_4014	0.14	-0.1
4,686,338	+		Pf6N2E2_4014	0.14	-1.4
4,686,338	+		Pf6N2E2_4014	0.14	-1.8
4,686,338	+		Pf6N2E2_4014	0.14	+0.7
4,686,338	+		Pf6N2E2_4014	0.14	-2.3
4,686,338	+		Pf6N2E2_4014	0.14	-1.4
4,686,562	+		Pf6N2E2_4014	0.29	-1.9
4,686,562	+		Pf6N2E2_4014	0.29	-0.1
4,686,562	+		Pf6N2E2_4014	0.29	-0.6
4,686,562	+		Pf6N2E2_4014	0.29	-0.8
4,686,563	-		Pf6N2E2_4014	0.29	-1.1
4,686,677	+		Pf6N2E2_4014	0.37	+0.0
4,686,677	+		Pf6N2E2_4014	0.37	-0.4
4,686,677	+		Pf6N2E2_4014	0.37	-0.6
4,686,695	+		Pf6N2E2_4014	0.39	-0.6
4,686,696	-		Pf6N2E2_4014	0.39	-0.3
4,686,696	-		Pf6N2E2_4014	0.39	-0.7
4,686,696	-		Pf6N2E2_4014	0.39	-1.6
4,686,696	-		Pf6N2E2_4014	0.39	-1.7
4,686,768	+		Pf6N2E2_4014	0.44	-2.1
4,686,796	-		Pf6N2E2_4014	0.46	-0.3
4,687,122	+		Pf6N2E2_4014	0.68	+0.0
4,687,202	+		Pf6N2E2_4014	0.74	-0.2
4,687,203	-		Pf6N2E2_4014	0.74	-2.8
4,687,203	-		Pf6N2E2_4014	0.74	-0.7
4,687,203	-		Pf6N2E2_4014	0.74	-0.5
4,687,203	-		Pf6N2E2_4014	0.74	-1.3
4,687,250	+		Pf6N2E2_4014	0.77	-1.0
4,687,572	+				-0.5
4,687,572	+				-1.2
4,687,573	-				-1.1
4,687,623	+				-1.8
4,687,623	+				-2.4
4,687,623	+				-1.6
4,687,624	-				+0.1
4,687,631	+				-0.6
4,687,632	-				+0.3
4,687,692	+				-0.2
4,687,760	+				+1.1
4,687,760	+				-0.7
4,687,908	+				+0.2
4,687,908	+				+0.7
4,687,914	+				+0.9
4,688,009	+				+0.1
4,688,009	+				-0.5
4,688,009	+				+0.2
4,688,009	+				+0.5
4,688,009	+				-0.4
4,688,009	+				+0.5
4,688,009	+				+0.1
4,688,009	+				+0.8
4,688,009	+				+0.3
4,688,009	+				-0.9
4,688,009	+				+0.7
4,688,009	+				+0.1
4,688,009	+				+0.3
4,688,009	+				+0.3
4,688,009	+				+1.1
4,688,009	+				+0.7
4,688,010	-				-0.8
4,688,010	-				+0.2
4,688,010	-				+1.3
4,688,010	-				-1.3
4,688,010	-				+0.5
4,688,010	-				+1.1
4,688,010	-				-1.5
4,688,010	-				+0.4
4,688,010	-				-0.2
4,688,010	-				+0.4
4,688,010	-				-0.8
4,688,010	-				+0.3
4,688,010	-				+3.3
4,688,010	-				+0.4
4,688,056	-				+0.4
4,688,120	+				-0.3
4,688,120	+				+1.2
4,688,120	+				-0.0
4,688,120	+				+0.0
4,688,121	-				+0.5
4,688,215	-				+0.4
4,688,215	-				+2.1
4,688,215	-				+0.4
4,688,247	+				+0.6
4,688,247	+				+0.6
4,688,247	+				-2.1
4,688,248	-				-0.7
4,688,248	-				+0.7
4,688,248	-				+1.1
4,688,292	+				+0.5
4,688,292	+				+0.5
4,688,329	-				+0.9
4,688,329	-				+0.9
4,688,384	+				+0.5
4,688,384	+				+0.9
4,688,385	-				+0.3
4,688,385	-				+0.1
4,688,385	-				+0.7
4,688,385	-				+0.0
4,688,398	-		Pf6N2E2_4015	0.10	+0.8
4,688,398	-		Pf6N2E2_4015	0.10	+0.0
4,688,415	+		Pf6N2E2_4015	0.12	+0.2
4,688,415	+		Pf6N2E2_4015	0.12	+0.1
4,688,415	+		Pf6N2E2_4015	0.12	+0.9
4,688,415	+		Pf6N2E2_4015	0.12	-0.8
4,688,416	-		Pf6N2E2_4015	0.12	+0.5
4,688,418	+		Pf6N2E2_4015	0.12	+0.2
4,688,516	+		Pf6N2E2_4015	0.22	-0.5
4,688,517	-		Pf6N2E2_4015	0.22	+1.7
4,688,577	+		Pf6N2E2_4015	0.28	+0.8
4,688,577	+		Pf6N2E2_4015	0.28	-1.4
4,688,578	-		Pf6N2E2_4015	0.28	-0.8