Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19465 and BWI76_RS19470 are separated by 53 nucleotides BWI76_RS19470 and BWI76_RS19475 overlap by 7 nucleotides BWI76_RS19475 and BWI76_RS19480 are separated by 210 nucleotides
BWI76_RS19465: BWI76_RS19465 - hypothetical protein, at 4,068,223 to 4,068,690
_RS19465
BWI76_RS19470: BWI76_RS19470 - DNA-binding response regulator, at 4,068,744 to 4,069,463
_RS19470
BWI76_RS19475: BWI76_RS19475 - signal transduction histidine kinase, at 4,069,457 to 4,071,145
_RS19475
BWI76_RS19480: BWI76_RS19480 - transcriptional regulator, at 4,071,356 to 4,072,114
_RS19480
Position (kb) 4069
4070
4071
4072 Strain fitness (log2 ratio) -1
0
1
2 at 4068.528 kb on + strand, within BWI76_RS19465 at 4068.530 kb on - strand, within BWI76_RS19465 at 4068.653 kb on + strand at 4069.303 kb on + strand, within BWI76_RS19470 at 4069.528 kb on - strand at 4069.690 kb on + strand, within BWI76_RS19475 at 4069.768 kb on + strand, within BWI76_RS19475 at 4070.172 kb on - strand, within BWI76_RS19475 at 4070.380 kb on - strand, within BWI76_RS19475 at 4070.627 kb on - strand, within BWI76_RS19475 at 4070.627 kb on - strand, within BWI76_RS19475 at 4070.779 kb on - strand, within BWI76_RS19475 at 4070.794 kb on - strand, within BWI76_RS19475 at 4071.122 kb on - strand at 4071.333 kb on + strand at 4071.663 kb on + strand, within BWI76_RS19480 at 4071.682 kb on + strand, within BWI76_RS19480 at 4071.906 kb on - strand, within BWI76_RS19480
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 4,068,528 + BWI76_RS19465 0.65 +0.6 4,068,530 - BWI76_RS19465 0.66 -0.9 4,068,653 + -0.2 4,069,303 + BWI76_RS19470 0.78 -0.1 4,069,528 - -0.1 4,069,690 + BWI76_RS19475 0.14 -0.5 4,069,768 + BWI76_RS19475 0.18 -1.0 4,070,172 - BWI76_RS19475 0.42 +2.2 4,070,380 - BWI76_RS19475 0.55 +0.1 4,070,627 - BWI76_RS19475 0.69 -0.5 4,070,627 - BWI76_RS19475 0.69 +0.9 4,070,779 - BWI76_RS19475 0.78 -0.8 4,070,794 - BWI76_RS19475 0.79 +0.0 4,071,122 - -0.3 4,071,333 + +1.3 4,071,663 + BWI76_RS19480 0.40 -0.9 4,071,682 + BWI76_RS19480 0.43 -0.2 4,071,906 - BWI76_RS19480 0.72 +0.5
Or see this region's nucleotide sequence