Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07340 and BWI76_RS07345 are separated by 19 nucleotides BWI76_RS07345 and BWI76_RS07350 are separated by 131 nucleotides
BWI76_RS07340: BWI76_RS07340 - amidohydrolase, at 1,546,555 to 1,547,733
_RS07340
BWI76_RS07345: BWI76_RS07345 - family 3 extracellular solute-binding protein, at 1,547,753 to 1,548,529
_RS07345
BWI76_RS07350: BWI76_RS07350 - alcohol dehydrogenase, at 1,548,661 to 1,549,614
_RS07350
Position (kb)
1547
1548
1549 Strain fitness (log2 ratio)
-1
0
1
2 at 1546.777 kb on - strand, within BWI76_RS07340 at 1546.813 kb on + strand, within BWI76_RS07340 at 1546.824 kb on + strand, within BWI76_RS07340 at 1546.881 kb on - strand, within BWI76_RS07340 at 1546.929 kb on + strand, within BWI76_RS07340 at 1546.944 kb on + strand, within BWI76_RS07340 at 1546.947 kb on + strand, within BWI76_RS07340 at 1546.955 kb on - strand, within BWI76_RS07340 at 1546.972 kb on + strand, within BWI76_RS07340 at 1547.036 kb on + strand, within BWI76_RS07340 at 1547.228 kb on + strand, within BWI76_RS07340 at 1547.324 kb on + strand, within BWI76_RS07340 at 1547.644 kb on + strand at 1547.732 kb on - strand at 1547.734 kb on + strand at 1547.778 kb on - strand at 1547.778 kb on - strand at 1547.788 kb on - strand at 1547.855 kb on - strand, within BWI76_RS07345 at 1547.884 kb on + strand, within BWI76_RS07345 at 1547.929 kb on + strand, within BWI76_RS07345 at 1547.937 kb on - strand, within BWI76_RS07345 at 1547.943 kb on - strand, within BWI76_RS07345 at 1547.970 kb on + strand, within BWI76_RS07345 at 1548.030 kb on - strand, within BWI76_RS07345 at 1548.030 kb on - strand, within BWI76_RS07345 at 1548.067 kb on + strand, within BWI76_RS07345 at 1548.075 kb on - strand, within BWI76_RS07345 at 1548.075 kb on - strand, within BWI76_RS07345 at 1548.188 kb on + strand, within BWI76_RS07345 at 1548.201 kb on - strand, within BWI76_RS07345 at 1548.539 kb on + strand at 1548.553 kb on + strand at 1548.553 kb on + strand at 1548.561 kb on - strand at 1548.883 kb on - strand, within BWI76_RS07350 at 1548.883 kb on - strand, within BWI76_RS07350 at 1548.914 kb on - strand, within BWI76_RS07350 at 1549.476 kb on - strand, within BWI76_RS07350
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 1,546,777 - BWI76_RS07340 0.19 -0.7 1,546,813 + BWI76_RS07340 0.22 -0.5 1,546,824 + BWI76_RS07340 0.23 -0.1 1,546,881 - BWI76_RS07340 0.28 +0.3 1,546,929 + BWI76_RS07340 0.32 -0.1 1,546,944 + BWI76_RS07340 0.33 -0.3 1,546,947 + BWI76_RS07340 0.33 -1.6 1,546,955 - BWI76_RS07340 0.34 +0.9 1,546,972 + BWI76_RS07340 0.35 +0.0 1,547,036 + BWI76_RS07340 0.41 +0.3 1,547,228 + BWI76_RS07340 0.57 -0.2 1,547,324 + BWI76_RS07340 0.65 +0.3 1,547,644 + +0.5 1,547,732 - -1.3 1,547,734 + +0.8 1,547,778 - +0.1 1,547,778 - +0.5 1,547,788 - +0.7 1,547,855 - BWI76_RS07345 0.13 +1.6 1,547,884 + BWI76_RS07345 0.17 +1.0 1,547,929 + BWI76_RS07345 0.23 +2.4 1,547,937 - BWI76_RS07345 0.24 +0.1 1,547,943 - BWI76_RS07345 0.24 +0.3 1,547,970 + BWI76_RS07345 0.28 -0.8 1,548,030 - BWI76_RS07345 0.36 +0.3 1,548,030 - BWI76_RS07345 0.36 +0.5 1,548,067 + BWI76_RS07345 0.40 +0.3 1,548,075 - BWI76_RS07345 0.41 +0.7 1,548,075 - BWI76_RS07345 0.41 -0.6 1,548,188 + BWI76_RS07345 0.56 +1.2 1,548,201 - BWI76_RS07345 0.58 +0.7 1,548,539 + -1.3 1,548,553 + +0.1 1,548,553 + +0.3 1,548,561 - +2.7 1,548,883 - BWI76_RS07350 0.23 +0.5 1,548,883 - BWI76_RS07350 0.23 -0.1 1,548,914 - BWI76_RS07350 0.27 +2.0 1,549,476 - BWI76_RS07350 0.85 -0.4
Or see this region's nucleotide sequence