Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT1200 and BT1201 are separated by 5 nucleotides BT1201 and BT1202 are separated by 82 nucleotides BT1202 and BT1203 overlap by 22 nucleotides
BT1200: BT1200 - hypothetical protein (NCBI ptt file), at 1,496,433 to 1,496,927
BT1200
BT1201: BT1201 - conserved hypothetical protein (NCBI ptt file), at 1,496,933 to 1,497,562
BT1201
BT1202: BT1202 - UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file), at 1,497,645 to 1,498,121
BT1202
BT1203: BT1203 - putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file), at 1,498,100 to 1,498,729
BT1203
Position (kb)
1497
1498
1499 Strain fitness (log2 ratio)
-1
0
1 at 1496.668 kb on - strand, within BT1200 at 1496.748 kb on + strand, within BT1200 at 1496.966 kb on + strand at 1496.970 kb on - strand at 1496.970 kb on - strand at 1497.190 kb on + strand, within BT1201 at 1497.193 kb on + strand, within BT1201 at 1497.302 kb on - strand, within BT1201 at 1497.452 kb on + strand, within BT1201 at 1497.565 kb on - strand at 1497.572 kb on - strand at 1497.973 kb on + strand, within BT1202 at 1498.064 kb on + strand, within BT1202 at 1498.151 kb on + strand at 1498.155 kb on - strand at 1498.216 kb on - strand, within BT1203 at 1498.353 kb on + strand, within BT1203 at 1498.370 kb on + strand, within BT1203 at 1498.371 kb on - strand, within BT1203 at 1498.401 kb on + strand, within BT1203 at 1498.514 kb on - strand, within BT1203 at 1498.986 kb on - strand at 1499.047 kb on - strand at 1499.049 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 1,496,668 - BT1200 0.47 -1.4 1,496,748 + BT1200 0.64 -0.4 1,496,966 + +1.0 1,496,970 - +0.0 1,496,970 - +0.6 1,497,190 + BT1201 0.41 -1.6 1,497,193 + BT1201 0.41 -1.2 1,497,302 - BT1201 0.59 +0.4 1,497,452 + BT1201 0.82 -1.2 1,497,565 - +0.9 1,497,572 - +0.6 1,497,973 + BT1202 0.69 -1.2 1,498,064 + BT1202 0.88 +0.6 1,498,151 + -0.7 1,498,155 - -0.7 1,498,216 - BT1203 0.18 +0.6 1,498,353 + BT1203 0.40 -1.5 1,498,370 + BT1203 0.43 +0.3 1,498,371 - BT1203 0.43 +0.1 1,498,401 + BT1203 0.48 -0.6 1,498,514 - BT1203 0.66 -0.9 1,498,986 - -0.8 1,499,047 - +0.6 1,499,049 - -0.4
Or see this region's nucleotide sequence