Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0455 and BT0456 overlap by 4 nucleotides BT0456 and BT0457 are separated by 11 nucleotides
BT0455: BT0455 - sialidase (Neuraminidase) (NCBI ptt file), at 557,455 to 559,089
BT0455
BT0456: BT0456 - beta-hexosaminidase precursor (NCBI ptt file), at 559,086 to 561,098
BT0456
BT0457: BT0457 - sialic acid-specific 9-O-acetylesterase (NCBI ptt file), at 561,110 to 563,188
BT0457
Position (kb) 559
560
561
562 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 558.112 kb on + strand, within BT0455 at 558.113 kb on - strand, within BT0455 at 558.113 kb on - strand, within BT0455 at 558.124 kb on + strand, within BT0455 at 558.127 kb on - strand, within BT0455 at 558.129 kb on + strand, within BT0455 at 558.130 kb on - strand, within BT0455 at 558.130 kb on - strand, within BT0455 at 558.152 kb on - strand, within BT0455 at 558.156 kb on - strand, within BT0455 at 558.276 kb on + strand, within BT0455 at 558.277 kb on - strand, within BT0455 at 558.426 kb on + strand, within BT0455 at 558.451 kb on - strand, within BT0455 at 558.595 kb on - strand, within BT0455 at 558.595 kb on - strand, within BT0455 at 558.659 kb on + strand, within BT0455 at 558.798 kb on - strand, within BT0455 at 558.802 kb on - strand, within BT0455 at 558.835 kb on - strand, within BT0455 at 558.847 kb on - strand, within BT0455 at 558.852 kb on + strand, within BT0455 at 558.898 kb on - strand, within BT0455 at 558.907 kb on - strand, within BT0455 at 558.985 kb on - strand at 559.138 kb on - strand at 559.139 kb on + strand at 559.142 kb on - strand at 559.142 kb on - strand at 559.284 kb on - strand at 559.311 kb on - strand, within BT0456 at 559.319 kb on - strand, within BT0456 at 559.345 kb on + strand, within BT0456 at 559.345 kb on + strand, within BT0456 at 559.411 kb on + strand, within BT0456 at 559.447 kb on + strand, within BT0456 at 559.448 kb on - strand, within BT0456 at 559.497 kb on - strand, within BT0456 at 559.499 kb on + strand, within BT0456 at 559.547 kb on - strand, within BT0456 at 559.558 kb on - strand, within BT0456 at 559.723 kb on - strand, within BT0456 at 559.761 kb on - strand, within BT0456 at 559.923 kb on - strand, within BT0456 at 559.981 kb on - strand, within BT0456 at 560.032 kb on - strand, within BT0456 at 560.153 kb on - strand, within BT0456 at 560.153 kb on - strand, within BT0456 at 560.169 kb on - strand, within BT0456 at 560.261 kb on + strand, within BT0456 at 560.338 kb on - strand, within BT0456 at 560.423 kb on - strand, within BT0456 at 560.464 kb on - strand, within BT0456 at 560.566 kb on - strand, within BT0456 at 560.566 kb on - strand, within BT0456 at 560.567 kb on + strand, within BT0456 at 560.568 kb on - strand, within BT0456 at 560.571 kb on + strand, within BT0456 at 560.616 kb on - strand, within BT0456 at 560.633 kb on - strand, within BT0456 at 560.689 kb on - strand, within BT0456 at 560.689 kb on - strand, within BT0456 at 560.695 kb on - strand, within BT0456 at 560.862 kb on - strand, within BT0456 at 560.943 kb on - strand at 561.002 kb on - strand at 561.108 kb on - strand at 561.126 kb on + strand at 561.152 kb on - strand at 561.215 kb on + strand at 561.242 kb on - strand at 561.347 kb on + strand, within BT0457 at 561.348 kb on - strand, within BT0457 at 561.394 kb on + strand at 561.424 kb on + strand, within BT0457 at 561.425 kb on - strand at 561.539 kb on - strand, within BT0457 at 561.539 kb on - strand, within BT0457 at 561.539 kb on - strand, within BT0457 at 561.539 kb on - strand, within BT0457 at 561.700 kb on - strand, within BT0457 at 561.724 kb on + strand, within BT0457 at 561.744 kb on - strand, within BT0457 at 561.793 kb on + strand, within BT0457 at 561.871 kb on - strand, within BT0457 at 561.961 kb on + strand, within BT0457
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 558,112 + BT0455 0.40 -1.4 558,113 - BT0455 0.40 +1.6 558,113 - BT0455 0.40 -0.7 558,124 + BT0455 0.41 -1.1 558,127 - BT0455 0.41 -0.4 558,129 + BT0455 0.41 +0.5 558,130 - BT0455 0.41 -1.9 558,130 - BT0455 0.41 -1.2 558,152 - BT0455 0.43 +0.6 558,156 - BT0455 0.43 -0.5 558,276 + BT0455 0.50 -2.5 558,277 - BT0455 0.50 +0.1 558,426 + BT0455 0.59 -0.6 558,451 - BT0455 0.61 +0.1 558,595 - BT0455 0.70 +0.6 558,595 - BT0455 0.70 -1.7 558,659 + BT0455 0.74 -0.7 558,798 - BT0455 0.82 -1.8 558,802 - BT0455 0.82 -1.1 558,835 - BT0455 0.84 -1.4 558,847 - BT0455 0.85 -0.4 558,852 + BT0455 0.85 -0.4 558,898 - BT0455 0.88 -1.5 558,907 - BT0455 0.89 -0.7 558,985 - -2.3 559,138 - -1.9 559,139 + -1.6 559,142 - -2.5 559,142 - +0.1 559,284 - -1.4 559,311 - BT0456 0.11 +0.9 559,319 - BT0456 0.12 +2.2 559,345 + BT0456 0.13 +1.2 559,345 + BT0456 0.13 -1.5 559,411 + BT0456 0.16 +0.1 559,447 + BT0456 0.18 -0.1 559,448 - BT0456 0.18 -1.4 559,497 - BT0456 0.20 +0.6 559,499 + BT0456 0.21 -0.9 559,547 - BT0456 0.23 +1.6 559,558 - BT0456 0.23 -0.7 559,723 - BT0456 0.32 -0.0 559,761 - BT0456 0.34 -0.8 559,923 - BT0456 0.42 +1.6 559,981 - BT0456 0.44 +3.2 560,032 - BT0456 0.47 -0.8 560,153 - BT0456 0.53 +1.6 560,153 - BT0456 0.53 +0.8 560,169 - BT0456 0.54 +0.9 560,261 + BT0456 0.58 -1.5 560,338 - BT0456 0.62 -0.5 560,423 - BT0456 0.66 -0.9 560,464 - BT0456 0.68 -0.7 560,566 - BT0456 0.74 +1.1 560,566 - BT0456 0.74 -1.1 560,567 + BT0456 0.74 -1.7 560,568 - BT0456 0.74 -1.4 560,571 + BT0456 0.74 +1.6 560,616 - BT0456 0.76 -0.5 560,633 - BT0456 0.77 -0.3 560,689 - BT0456 0.80 -1.2 560,689 - BT0456 0.80 -0.1 560,695 - BT0456 0.80 +0.4 560,862 - BT0456 0.88 -1.5 560,943 - -0.7 561,002 - -0.7 561,108 - +0.4 561,126 + -1.5 561,152 - +0.3 561,215 + -1.5 561,242 - -1.7 561,347 + BT0457 0.11 +0.3 561,348 - BT0457 0.11 -1.4 561,394 + +0.3 561,424 + BT0457 0.15 -0.0 561,425 - +1.6 561,539 - BT0457 0.21 -1.2 561,539 - BT0457 0.21 -0.8 561,539 - BT0457 0.21 -1.2 561,539 - BT0457 0.21 -1.0 561,700 - BT0457 0.28 +1.0 561,724 + BT0457 0.30 -0.6 561,744 - BT0457 0.30 +0.9 561,793 + BT0457 0.33 -1.2 561,871 - BT0457 0.37 -0.4 561,961 + BT0457 0.41 -0.5
Or see this region's nucleotide sequence