Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21900 and BWI76_RS21905 are separated by 0 nucleotides BWI76_RS21905 and BWI76_RS21910 are separated by 5 nucleotides
BWI76_RS21900: BWI76_RS21900 - amino acid ABC transporter permease/ATP-binding protein, at 4,576,005 to 4,577,525
_RS21900
BWI76_RS21905: BWI76_RS21905 - class II aldolase, at 4,577,526 to 4,578,254
_RS21905
BWI76_RS21910: BWI76_RS21910 - glyoxylate/hydroxypyruvate reductase A, at 4,578,260 to 4,579,192
_RS21910
Position (kb) 4577
4578
4579 Strain fitness (log2 ratio) -1
0
1 at 4576.550 kb on + strand, within BWI76_RS21900 at 4576.584 kb on - strand, within BWI76_RS21900 at 4576.648 kb on - strand, within BWI76_RS21900 at 4576.648 kb on - strand, within BWI76_RS21900 at 4576.690 kb on + strand, within BWI76_RS21900 at 4576.905 kb on + strand, within BWI76_RS21900 at 4577.012 kb on - strand, within BWI76_RS21900 at 4577.076 kb on + strand, within BWI76_RS21900 at 4577.115 kb on - strand, within BWI76_RS21900 at 4577.449 kb on - strand at 4577.723 kb on + strand, within BWI76_RS21905 at 4577.733 kb on + strand, within BWI76_RS21905 at 4577.741 kb on - strand, within BWI76_RS21905 at 4578.165 kb on - strand, within BWI76_RS21905 at 4578.167 kb on + strand, within BWI76_RS21905 at 4578.230 kb on + strand at 4578.296 kb on + strand at 4578.304 kb on - strand at 4578.342 kb on - strand at 4578.700 kb on + strand, within BWI76_RS21910 at 4578.843 kb on - strand, within BWI76_RS21910 at 4578.855 kb on - strand, within BWI76_RS21910 at 4579.229 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 4,576,550 + BWI76_RS21900 0.36 +0.0 4,576,584 - BWI76_RS21900 0.38 +1.5 4,576,648 - BWI76_RS21900 0.42 +0.2 4,576,648 - BWI76_RS21900 0.42 -0.0 4,576,690 + BWI76_RS21900 0.45 -1.0 4,576,905 + BWI76_RS21900 0.59 -0.0 4,577,012 - BWI76_RS21900 0.66 +0.2 4,577,076 + BWI76_RS21900 0.70 +0.1 4,577,115 - BWI76_RS21900 0.73 -0.6 4,577,449 - -0.3 4,577,723 + BWI76_RS21905 0.27 -0.0 4,577,733 + BWI76_RS21905 0.28 +1.6 4,577,741 - BWI76_RS21905 0.29 +0.8 4,578,165 - BWI76_RS21905 0.88 +1.5 4,578,167 + BWI76_RS21905 0.88 +0.3 4,578,230 + -0.8 4,578,296 + -0.7 4,578,304 - +0.0 4,578,342 - +0.1 4,578,700 + BWI76_RS21910 0.47 -0.1 4,578,843 - BWI76_RS21910 0.62 +0.7 4,578,855 - BWI76_RS21910 0.64 +0.2 4,579,229 + +0.9
Or see this region's nucleotide sequence