Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18660 and BWI76_RS18665 are separated by 10 nucleotides BWI76_RS18665 and BWI76_RS18670 are separated by 12 nucleotides BWI76_RS18670 and BWI76_RS18675 are separated by 17 nucleotides
BWI76_RS18660: BWI76_RS18660 - hypothetical protein, at 3,867,531 to 3,870,158
_RS18660
BWI76_RS18665: BWI76_RS18665 - hypothetical protein, at 3,870,169 to 3,870,696
_RS18665
BWI76_RS18670: BWI76_RS18670 - hypothetical protein, at 3,870,709 to 3,871,212
_RS18670
BWI76_RS18675: BWI76_RS18675 - fimbrial protein, at 3,871,230 to 3,872,135
_RS18675
Position (kb) 3870
3871
3872 Strain fitness (log2 ratio) -1
0
1 at 3869.859 kb on - strand, within BWI76_RS18660 at 3869.908 kb on - strand at 3870.140 kb on + strand at 3870.808 kb on + strand, within BWI76_RS18670 at 3870.872 kb on + strand, within BWI76_RS18670 at 3871.055 kb on + strand, within BWI76_RS18670 at 3871.203 kb on - strand at 3871.203 kb on - strand at 3871.467 kb on - strand, within BWI76_RS18675 at 3871.598 kb on + strand, within BWI76_RS18675 at 3872.041 kb on + strand, within BWI76_RS18675 at 3872.121 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 3,869,859 - BWI76_RS18660 0.89 -0.8 3,869,908 - -0.5 3,870,140 + +0.3 3,870,808 + BWI76_RS18670 0.20 +0.9 3,870,872 + BWI76_RS18670 0.32 +0.7 3,871,055 + BWI76_RS18670 0.69 -0.2 3,871,203 - +0.0 3,871,203 - +0.1 3,871,467 - BWI76_RS18675 0.26 -1.4 3,871,598 + BWI76_RS18675 0.41 -0.1 3,872,041 + BWI76_RS18675 0.90 -0.7 3,872,121 - +0.4
Or see this region's nucleotide sequence