Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07535 and BWI76_RS07540 overlap by 11 nucleotides BWI76_RS07540 and BWI76_RS07545 are separated by 17 nucleotides
BWI76_RS07535: BWI76_RS07535 - dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein, at 1,594,703 to 1,595,746
_RS07535
BWI76_RS07540: BWI76_RS07540 - dipeptide ABC transporter ATP-binding protein DppD, at 1,595,736 to 1,596,746
_RS07540
BWI76_RS07545: BWI76_RS07545 - amidase, at 1,596,764 to 1,597,948
_RS07545
Position (kb)
1595
1596
1597 Strain fitness (log2 ratio)
-2
-1
0
1 at 1594.808 kb on + strand, within BWI76_RS07535 at 1594.828 kb on + strand, within BWI76_RS07535 at 1594.964 kb on - strand, within BWI76_RS07535 at 1595.181 kb on - strand, within BWI76_RS07535 at 1595.470 kb on + strand, within BWI76_RS07535 at 1595.554 kb on + strand, within BWI76_RS07535 at 1595.608 kb on + strand, within BWI76_RS07535 at 1595.608 kb on + strand, within BWI76_RS07535 at 1595.783 kb on - strand at 1595.824 kb on + strand at 1595.892 kb on - strand, within BWI76_RS07540 at 1596.345 kb on + strand, within BWI76_RS07540 at 1596.422 kb on + strand, within BWI76_RS07540 at 1596.548 kb on + strand, within BWI76_RS07540 at 1596.627 kb on + strand, within BWI76_RS07540 at 1597.190 kb on + strand, within BWI76_RS07545 at 1597.345 kb on - strand, within BWI76_RS07545 at 1597.345 kb on - strand, within BWI76_RS07545 at 1597.449 kb on + strand, within BWI76_RS07545 at 1597.720 kb on - strand, within BWI76_RS07545
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 1,594,808 + BWI76_RS07535 0.10 -1.8 1,594,828 + BWI76_RS07535 0.12 -0.2 1,594,964 - BWI76_RS07535 0.25 -0.3 1,595,181 - BWI76_RS07535 0.46 +0.2 1,595,470 + BWI76_RS07535 0.73 +0.1 1,595,554 + BWI76_RS07535 0.82 -0.5 1,595,608 + BWI76_RS07535 0.87 -0.1 1,595,608 + BWI76_RS07535 0.87 -0.0 1,595,783 - +0.3 1,595,824 + +0.2 1,595,892 - BWI76_RS07540 0.15 -0.0 1,596,345 + BWI76_RS07540 0.60 +0.3 1,596,422 + BWI76_RS07540 0.68 +0.5 1,596,548 + BWI76_RS07540 0.80 +1.6 1,596,627 + BWI76_RS07540 0.88 -0.8 1,597,190 + BWI76_RS07545 0.36 +0.1 1,597,345 - BWI76_RS07545 0.49 -0.5 1,597,345 - BWI76_RS07545 0.49 -1.1 1,597,449 + BWI76_RS07545 0.58 +0.4 1,597,720 - BWI76_RS07545 0.81 +0.1
Or see this region's nucleotide sequence