Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_29070

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
6,317,470	+		AO353_29060	0.50	-1.7
6,317,470	+		AO353_29060	0.50	+1.5
6,317,471	-		AO353_29060	0.50	+0.1
6,317,471	-		AO353_29060	0.50	-0.2
6,317,509	+		AO353_29060	0.55	+1.3
6,317,509	+		AO353_29060	0.55	-0.8
6,317,510	-		AO353_29060	0.56	-0.1
6,317,528	-		AO353_29060	0.58	-0.2
6,317,608	+		AO353_29060	0.69	-0.9
6,317,609	-		AO353_29060	0.69	+1.1
6,317,703	+		AO353_29060	0.83	+0.5
6,317,770	+				+1.1
6,317,945	+		AO353_29065	0.29	+1.0
6,317,945	+		AO353_29065	0.29	+0.3
6,317,945	+		AO353_29065	0.29	-3.4
6,317,945	+		AO353_29065	0.29	-2.6
6,317,945	+		AO353_29065	0.29	+0.5
6,317,946	-		AO353_29065	0.29	-0.7
6,317,987	+		AO353_29065	0.40	-1.3
6,317,987	+		AO353_29065	0.40	+1.0
6,317,987	+		AO353_29065	0.40	-1.4
6,317,987	+		AO353_29065	0.40	-2.9
6,317,988	-		AO353_29065	0.40	+0.2
6,317,988	-		AO353_29065	0.40	-2.0
6,317,988	-		AO353_29065	0.40	-1.4
6,317,988	-		AO353_29065	0.40	-0.8
6,317,988	-		AO353_29065	0.40	+2.3
6,317,988	-		AO353_29065	0.40	-1.7
6,317,988	-		AO353_29065	0.40	-1.6
6,317,988	-		AO353_29065	0.40	-2.7
6,318,258	-				+0.6
6,318,273	+				+0.6
6,318,273	+				-0.6
6,318,273	+				-0.4
6,318,273	+				+0.2
6,318,274	-				-2.9
6,318,274	-				+1.3
6,318,274	-				+1.3
6,318,375	+				-1.5
6,318,375	+				-0.2
6,318,375	+				-2.3
6,318,375	+				-1.4
6,318,375	+				+0.9
6,318,375	+				-1.1
6,318,376	-				+3.0
6,318,376	-				+1.4
6,318,376	-				+0.3
6,318,384	+				+2.3
6,318,385	-				+1.2
6,318,385	-				-1.5
6,318,385	-				+0.0
6,318,385	-				-1.5
6,318,414	+				+0.3
6,318,414	+				+0.0
6,318,414	+				+1.0
6,318,414	+				-1.1
6,318,414	+				+1.0
6,318,414	+				+2.3
6,318,414	+				-2.0
6,318,415	-				+1.6
6,318,415	-				+0.5
6,318,415	-				-0.7
6,318,415	-				+3.9
6,318,415	-				-0.3
6,318,446	-				-0.7
6,318,544	+		AO353_29070	0.11	-0.4
6,318,544	+		AO353_29070	0.11	+1.1
6,318,544	+		AO353_29070	0.11	-2.6
6,318,544	+		AO353_29070	0.11	-2.3
6,318,545	-		AO353_29070	0.11	+2.9
6,318,545	-		AO353_29070	0.11	-1.9
6,318,545	-		AO353_29070	0.11	-0.3
6,318,545	-		AO353_29070	0.11	-2.7
6,318,545	-		AO353_29070	0.11	-0.2
6,318,545	-		AO353_29070	0.11	-0.2
6,318,545	-		AO353_29070	0.11	-1.7
6,318,545	-		AO353_29070	0.11	-1.2
6,318,550	+		AO353_29070	0.11	+1.0
6,318,551	-		AO353_29070	0.11	+2.1
6,318,551	-		AO353_29070	0.11	+1.8
6,318,551	-		AO353_29070	0.11	-1.9
6,318,727	+		AO353_29070	0.22	+1.1
6,318,727	+		AO353_29070	0.22	+0.4
6,318,728	-		AO353_29070	0.22	-1.0
6,318,728	-		AO353_29070	0.22	-0.7
6,318,728	-		AO353_29070	0.22	+1.5
6,318,728	-		AO353_29070	0.22	-2.4
6,318,728	-		AO353_29070	0.22	-2.2
6,318,728	-		AO353_29070	0.22	+2.2
6,318,728	-		AO353_29070	0.22	+2.8
6,318,829	+		AO353_29070	0.28	-0.1
6,318,829	+		AO353_29070	0.28	+0.1
6,318,829	+		AO353_29070	0.28	+1.3
6,318,830	-		AO353_29070	0.28	+0.0
6,318,830	-		AO353_29070	0.28	-0.8
6,318,850	+		AO353_29070	0.30	-1.1
6,318,850	+		AO353_29070	0.30	-1.4
6,318,850	+		AO353_29070	0.30	-0.7
6,318,850	+		AO353_29070	0.30	+0.3
6,318,850	+		AO353_29070	0.30	-2.2
6,318,850	+		AO353_29070	0.30	-0.7
6,318,850	+		AO353_29070	0.30	-1.2
6,318,851	-		AO353_29070	0.30	+1.3
6,318,851	-		AO353_29070	0.30	-0.2
6,318,851	-		AO353_29070	0.30	-0.7
6,318,851	-		AO353_29070	0.30	-0.6
6,318,851	-		AO353_29070	0.30	-1.0
6,318,851	-		AO353_29070	0.30	-1.4
6,318,872	-		AO353_29070	0.31	-0.1
6,319,038	+		AO353_29070	0.41	-0.5
6,319,038	+		AO353_29070	0.41	+1.1
6,319,038	+		AO353_29070	0.41	+0.8
6,319,038	+		AO353_29070	0.41	-2.2
6,319,038	+		AO353_29070	0.41	-2.2
6,319,038	+		AO353_29070	0.41	+0.8
6,319,039	-		AO353_29070	0.41	+0.0
6,319,039	-		AO353_29070	0.41	-1.1
6,319,039	-		AO353_29070	0.41	+0.0
6,319,039	-		AO353_29070	0.41	-0.1
6,319,039	-		AO353_29070	0.41	+0.0
6,319,039	-		AO353_29070	0.41	-2.0
6,319,039	-		AO353_29070	0.41	-2.2
6,319,079	+		AO353_29070	0.44	-1.0
6,319,079	+		AO353_29070	0.44	-1.9
6,319,080	-		AO353_29070	0.44	+0.3
6,319,080	-		AO353_29070	0.44	-2.1
6,319,081	+		AO353_29070	0.44	-1.7
6,319,081	+		AO353_29070	0.44	-1.0
6,319,081	+		AO353_29070	0.44	-1.6
6,319,081	+		AO353_29070	0.44	-1.6
6,319,081	+		AO353_29070	0.44	-2.7
6,319,081	+		AO353_29070	0.44	-1.4
6,319,081	+		AO353_29070	0.44	+0.0
6,319,081	+		AO353_29070	0.44	+0.3
6,319,081	+		AO353_29070	0.44	+0.5
6,319,081	+		AO353_29070	0.44	-1.6
6,319,082	-		AO353_29070	0.44	-1.2
6,319,082	-		AO353_29070	0.44	-0.6
6,319,082	-		AO353_29070	0.44	-1.5
6,319,082	-		AO353_29070	0.44	-0.7
6,319,082	-		AO353_29070	0.44	-0.1
6,319,082	-		AO353_29070	0.44	-0.5
6,319,082	-		AO353_29070	0.44	+1.8
6,319,082	-		AO353_29070	0.44	-2.5
6,319,082	-		AO353_29070	0.44	-1.0
6,319,082	-		AO353_29070	0.44	-1.0
6,319,171	+		AO353_29070	0.49	+2.4
6,319,226	+		AO353_29070	0.53	+0.0
6,319,614	+		AO353_29070	0.77	+2.2
6,319,614	+		AO353_29070	0.77	+2.0
6,319,615	-		AO353_29070	0.77	+3.9
6,319,615	-		AO353_29070	0.77	-0.8
6,319,615	-		AO353_29070	0.77	-0.4
6,319,650	+		AO353_29070	0.79	-1.6
6,319,650	+		AO353_29070	0.79	-1.1
6,319,650	+		AO353_29070	0.79	-1.7
6,319,650	+		AO353_29070	0.79	-0.4
6,319,650	+		AO353_29070	0.79	-1.6
6,319,650	+		AO353_29070	0.79	+0.5
6,319,650	+		AO353_29070	0.79	-3.0
6,319,650	+		AO353_29070	0.79	-2.0
6,319,650	+		AO353_29070	0.79	-2.5
6,319,650	+		AO353_29070	0.79	+0.1
6,319,650	+		AO353_29070	0.79	-0.4
6,319,650	+		AO353_29070	0.79	+2.6
6,319,650	+		AO353_29070	0.79	-0.4
6,319,651	-		AO353_29070	0.79	-1.7
6,319,651	-		AO353_29070	0.79	-0.2
6,319,651	-		AO353_29070	0.79	+1.7
6,319,651	-		AO353_29070	0.79	+1.9
6,319,651	-		AO353_29070	0.79	+0.0
6,319,651	-		AO353_29070	0.79	-1.4
6,319,651	-		AO353_29070	0.79	-2.1
6,319,651	-		AO353_29070	0.79	+0.3
6,319,651	-		AO353_29070	0.79	+1.6
6,319,651	-		AO353_29070	0.79	+1.8
6,319,651	-		AO353_29070	0.79	+0.8
6,319,651	-		AO353_29070	0.79	-1.5
6,319,651	-		AO353_29070	0.79	-0.3
6,319,678	-		AO353_29070	0.80	+3.8
6,319,683	+		AO353_29070	0.81	+2.3
6,319,683	+		AO353_29070	0.81	-0.4
6,319,684	-		AO353_29070	0.81	-1.0
6,319,684	-		AO353_29070	0.81	-1.4
6,319,809	+		AO353_29070	0.88	+2.6
6,319,809	+		AO353_29070	0.88	+1.2
6,319,809	+		AO353_29070	0.88	+0.8
6,319,809	+		AO353_29070	0.88	+2.0
6,319,809	+		AO353_29070	0.88	-0.7
6,319,810	-		AO353_29070	0.89	+2.6
6,319,810	-		AO353_29070	0.89	-1.8
6,319,810	-		AO353_29070	0.89	+3.2
6,319,810	-		AO353_29070	0.89	-0.2
6,319,810	-		AO353_29070	0.89	-2.5
6,319,823	+		AO353_29070	0.89	-0.8
6,319,823	+		AO353_29070	0.89	-1.2
6,319,824	-		AO353_29070	0.89	-1.0
6,319,824	-		AO353_29070	0.89	+0.5
6,319,881	+				+0.0
6,319,881	+				+0.8
6,319,881	+				+1.8
6,319,881	+				+0.3
6,319,881	+				-2.0
6,319,881	+				+2.0
6,319,881	+				-1.5
6,319,881	+				-0.8
6,319,882	-				+0.3
6,319,882	-				-1.8
6,319,882	-				-1.1
6,319,882	-				+0.2
6,319,882	-				-0.8
6,319,885	-				-0.6
6,319,978	+				-0.5
6,319,978	+				-1.0
6,319,978	+				-0.7
6,319,978	+				+0.1
6,319,979	-				-1.4
6,319,979	-				+2.6
6,319,987	+				+1.1
6,319,987	+				-0.0
6,319,987	+				-0.4
6,319,987	+				-0.5
6,319,988	-				-0.5
6,319,988	-				-2.0
6,320,020	-				-1.0
6,320,091	-				+0.9
6,320,091	-				-1.2
6,320,266	-		AO353_29075	0.31	-1.9
6,320,301	-		AO353_29075	0.37	-0.7
6,320,513	+		AO353_29075	0.74	-1.7
6,320,513	+		AO353_29075	0.74	-1.4
6,320,514	-		AO353_29075	0.74	+0.3
6,320,514	-		AO353_29075	0.74	+0.3
6,320,514	-		AO353_29075	0.74	-0.7
6,320,514	-		AO353_29075	0.74	-0.8
6,320,514	-		AO353_29075	0.74	+0.0
6,320,514	-		AO353_29075	0.74	-1.1
6,320,535	+		AO353_29075	0.78	+2.7
6,320,537	+		AO353_29075	0.78	-1.5
6,320,537	+		AO353_29075	0.78	-1.7
6,320,537	+		AO353_29075	0.78	+0.1
6,320,537	+		AO353_29075	0.78	-0.9
6,320,537	+		AO353_29075	0.78	+2.0
6,320,537	+		AO353_29075	0.78	-1.0
6,320,537	+		AO353_29075	0.78	+0.3
6,320,537	+		AO353_29075	0.78	+1.8
6,320,537	+		AO353_29075	0.78	-1.0
6,320,537	+		AO353_29075	0.78	+0.2
6,320,538	-		AO353_29075	0.78	-2.4
6,320,538	-		AO353_29075	0.78	-1.4
6,320,538	-		AO353_29075	0.78	+0.9
6,320,538	-		AO353_29075	0.78	+0.2
6,320,538	-		AO353_29075	0.78	+0.3
6,320,538	-		AO353_29075	0.78	+1.8
6,320,538	-		AO353_29075	0.78	-1.5
6,320,538	-		AO353_29075	0.78	-1.6
6,320,569	+		AO353_29075	0.84	+0.1
6,320,579	+		AO353_29075	0.86	-2.6
6,320,580	-		AO353_29075	0.86	-0.5
6,320,580	-		AO353_29075	0.86	+0.0
6,320,732	+				+3.7
6,320,733	-				+2.3
6,320,733	-				-0.2
6,320,733	-				-1.0
6,320,788	+		AO353_29080	0.18	-1.0
6,320,788	+		AO353_29080	0.18	-0.7
6,320,788	+		AO353_29080	0.18	-0.6
6,320,788	+		AO353_29080	0.18	-1.0
6,320,789	-		AO353_29080	0.18	+0.8
6,320,789	-		AO353_29080	0.18	+1.3
6,320,789	-		AO353_29080	0.18	+1.3
6,320,789	-		AO353_29080	0.18	-1.6
6,320,789	-		AO353_29080	0.18	-0.5
6,320,789	-		AO353_29080	0.18	-0.2
6,320,789	-		AO353_29080	0.18	-1.8
6,320,789	-		AO353_29080	0.18	+3.1
6,320,789	-		AO353_29080	0.18	-1.3
6,320,789	-		AO353_29080	0.18	-0.7
6,320,817	+		AO353_29080	0.23	-0.3
6,320,817	+		AO353_29080	0.23	+2.3
6,320,817	+		AO353_29080	0.23	+2.5
6,320,817	+		AO353_29080	0.23	-1.1
6,320,817	+		AO353_29080	0.23	-2.9
6,320,817	+		AO353_29080	0.23	-1.4
6,320,817	+		AO353_29080	0.23	-0.6
6,320,817	+		AO353_29080	0.23	+0.1
6,320,817	+		AO353_29080	0.23	+1.3
6,320,817	+		AO353_29080	0.23	-1.6
6,320,817	+		AO353_29080	0.23	-0.7
6,320,818	-		AO353_29080	0.23	+1.2
6,320,818	-		AO353_29080	0.23	+0.2
6,320,818	-		AO353_29080	0.23	-1.4
6,320,973	+		AO353_29080	0.51	-1.2
6,320,973	+		AO353_29080	0.51	-2.2
6,320,973	+		AO353_29080	0.51	+0.0
6,320,973	+		AO353_29080	0.51	+1.3
6,320,973	+		AO353_29080	0.51	-1.0
6,320,974	-		AO353_29080	0.51	+1.5
6,320,974	-		AO353_29080	0.51	+0.8
6,320,974	-		AO353_29080	0.51	-2.2
6,320,974	-		AO353_29080	0.51	-1.6
6,320,974	-		AO353_29080	0.51	+0.0
6,320,974	-		AO353_29080	0.51	+0.1
6,320,974	-		AO353_29080	0.51	-0.7