Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28810

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
6,268,319	+		AO353_28800	0.89	-2.6
6,268,320	-		AO353_28800	0.89	+3.8
6,268,320	-		AO353_28800	0.89	+0.9
6,268,358	+				-0.5
6,268,359	-				-0.7
6,268,359	-				-2.2
6,268,361	+				-0.9
6,268,361	+				-0.9
6,268,361	+				+0.0
6,268,361	+				-3.1
6,268,362	-				-0.3
6,268,362	-				-1.2
6,268,384	+				-2.6
6,268,385	-				+1.3
6,268,428	+				+0.9
6,268,428	+				-1.5
6,268,428	+				+0.1
6,268,428	+				-2.4
6,268,429	-				+2.1
6,268,429	-				-0.8
6,268,429	-				+1.1
6,268,429	-				+0.8
6,268,429	-				+0.1
6,268,549	+		AO353_28805	0.15	-1.4
6,268,549	+		AO353_28805	0.15	-1.7
6,268,549	+		AO353_28805	0.15	+0.2
6,268,549	+		AO353_28805	0.15	+1.0
6,268,549	+		AO353_28805	0.15	-1.1
6,268,550	-		AO353_28805	0.15	+0.1
6,268,550	-		AO353_28805	0.15	-0.2
6,268,550	-		AO353_28805	0.15	-2.8
6,268,550	-		AO353_28805	0.15	+0.6
6,268,550	-		AO353_28805	0.15	-3.3
6,268,621	+		AO353_28805	0.23	-2.8
6,268,621	+		AO353_28805	0.23	-1.2
6,268,621	+		AO353_28805	0.23	+0.1
6,268,621	+		AO353_28805	0.23	-0.4
6,268,645	+		AO353_28805	0.26	-1.6
6,268,645	+		AO353_28805	0.26	-1.0
6,268,646	-		AO353_28805	0.26	+0.0
6,268,646	-		AO353_28805	0.26	+0.7
6,268,646	-		AO353_28805	0.26	+2.7
6,268,702	+		AO353_28805	0.32	-3.1
6,268,703	-		AO353_28805	0.33	-2.7
6,268,703	-		AO353_28805	0.33	+1.2
6,268,768	+		AO353_28805	0.40	-1.8
6,268,921	+		AO353_28805	0.58	+0.0
6,268,921	+		AO353_28805	0.58	+0.2
6,268,922	-		AO353_28805	0.58	-0.8
6,268,999	+		AO353_28805	0.66	+2.3
6,268,999	+		AO353_28805	0.66	-1.1
6,268,999	+		AO353_28805	0.66	+0.9
6,269,000	-		AO353_28805	0.67	+0.5
6,269,000	-		AO353_28805	0.67	-1.8
6,269,087	+		AO353_28805	0.77	-1.8
6,269,087	+		AO353_28805	0.77	-1.9
6,269,087	+		AO353_28805	0.77	+0.5
6,269,087	+		AO353_28805	0.77	-1.9
6,269,088	-		AO353_28805	0.77	+0.3
6,269,088	-		AO353_28805	0.77	-1.1
6,269,088	-		AO353_28805	0.77	-0.9
6,269,088	-		AO353_28805	0.77	+0.0
6,269,088	-		AO353_28805	0.77	+1.2
6,269,088	-		AO353_28805	0.77	-0.2
6,269,088	-		AO353_28805	0.77	-1.2
6,269,088	-		AO353_28805	0.77	+0.7
6,269,147	+		AO353_28805	0.83	-3.0
6,269,285	+				-0.6
6,269,286	-				+0.1
6,269,286	-				+0.6
6,269,508	+		AO353_28810	0.16	+1.5
6,269,508	+		AO353_28810	0.16	-0.8
6,269,508	+		AO353_28810	0.16	-1.0
6,269,509	-		AO353_28810	0.16	+4.3
6,269,509	-		AO353_28810	0.16	-2.0
6,269,509	-		AO353_28810	0.16	-1.1
6,269,511	+		AO353_28810	0.16	-1.7
6,269,511	+		AO353_28810	0.16	-1.3
6,269,511	+		AO353_28810	0.16	+0.5
6,269,511	+		AO353_28810	0.16	+0.3
6,269,512	-		AO353_28810	0.16	-1.7
6,269,512	-		AO353_28810	0.16	+1.9
6,269,535	+		AO353_28810	0.18	+0.5
6,269,535	+		AO353_28810	0.18	-0.3
6,269,536	-		AO353_28810	0.18	-0.8
6,269,536	-		AO353_28810	0.18	-1.7
6,269,536	-		AO353_28810	0.18	+0.5
6,269,545	+		AO353_28810	0.19	-1.5
6,269,546	-		AO353_28810	0.19	-1.3
6,269,546	-		AO353_28810	0.19	+0.9
6,269,729	+		AO353_28810	0.32	-1.2
6,269,729	+		AO353_28810	0.32	+0.3
6,269,730	-		AO353_28810	0.32	-1.2
6,269,730	-		AO353_28810	0.32	-0.9
6,269,730	-		AO353_28810	0.32	-1.9
6,269,783	-				+0.8
6,269,812	+		AO353_28810	0.38	-1.7
6,269,823	+		AO353_28810	0.39	+0.2
6,269,823	+		AO353_28810	0.39	-1.8
6,269,823	+		AO353_28810	0.39	+0.9
6,269,823	+		AO353_28810	0.39	-1.8
6,269,823	+		AO353_28810	0.39	+2.6
6,269,824	-		AO353_28810	0.39	-1.4
6,269,824	-		AO353_28810	0.39	-1.1
6,269,824	-		AO353_28810	0.39	-2.5
6,269,829	+		AO353_28810	0.39	-1.7
6,269,829	+		AO353_28810	0.39	-0.7
6,269,829	+		AO353_28810	0.39	+4.7
6,269,830	-		AO353_28810	0.39	+1.6
6,269,830	-		AO353_28810	0.39	-1.5
6,269,830	-		AO353_28810	0.39	-1.0
6,269,830	-		AO353_28810	0.39	+1.5
6,269,830	-		AO353_28810	0.39	-1.5
6,269,853	+		AO353_28810	0.41	-3.0
6,269,853	+		AO353_28810	0.41	-1.4
6,269,853	+		AO353_28810	0.41	+0.8
6,269,853	+		AO353_28810	0.41	-2.6
6,270,029	-		AO353_28810	0.54	-1.4
6,270,029	-		AO353_28810	0.54	+1.9
6,270,029	-		AO353_28810	0.54	+0.4
6,270,046	+		AO353_28810	0.55	-0.7
6,270,046	+		AO353_28810	0.55	-2.2
6,270,046	+		AO353_28810	0.55	-0.4
6,270,046	+		AO353_28810	0.55	-1.4
6,270,060	+		AO353_28810	0.56	+1.3
6,270,060	+		AO353_28810	0.56	+0.0
6,270,060	+		AO353_28810	0.56	+0.2
6,270,061	-		AO353_28810	0.56	-1.1
6,270,475	-		AO353_28810	0.86	-2.2
6,270,601	+				+2.4
6,270,643	+				+0.8
6,270,643	+				+1.7
6,270,643	+				-2.2
6,270,644	-				-1.4
6,270,729	+		AO353_28815	0.23	-0.2
6,270,729	+		AO353_28815	0.23	+2.3
6,270,729	+		AO353_28815	0.23	-0.2
6,270,807	+				-0.8
6,270,807	+		AO353_28815	0.55	+1.1
6,270,807	+		AO353_28815	0.55	+1.6
6,270,808	-		AO353_28815	0.55	+1.5
6,270,874	+		AO353_28815	0.82	+0.3
6,270,900	+				+3.2
6,270,900	+				+0.9
6,270,900	+				-1.6
6,270,900	+				-0.1
6,270,900	+				-0.5
6,270,900	+				-2.6
6,270,900	+				-0.1
6,270,900	+				+1.2
6,270,901	-				-0.7
6,270,901	-				-0.7
6,270,901	-				-0.5
6,270,901	-				-0.8
6,270,901	-				-0.2
6,270,901	-				+2.1
6,270,901	-				+0.0
6,270,901	-				-0.7
6,270,901	-				-0.8
6,270,901	-				+0.8
6,270,901	-				-1.2
6,270,935	+				+1.5
6,270,935	+				+1.7
6,270,935	+				-2.3
6,270,936	-				-0.7
6,270,936	-				-1.2
6,270,936	-				-0.2
6,270,936	-				-1.2
6,270,936	-				+1.8
6,270,936	-				-1.2
6,270,941	+				+0.1
6,270,941	+				+0.9
6,270,941	+				-2.1
6,270,941	+				-0.1
6,270,941	+				-1.7
6,270,942	-				-1.4
6,271,030	+				-0.1
6,271,205	+		AO353_28820	0.26	+2.0
6,271,206	-		AO353_28820	0.26	-1.0
6,271,250	+		AO353_28820	0.32	+0.3
6,271,251	-		AO353_28820	0.32	+0.0
6,271,251	-		AO353_28820	0.32	-1.8
6,271,265	+		AO353_28820	0.34	-0.7
6,271,266	-		AO353_28820	0.34	-2.9
6,271,334	+		AO353_28820	0.43	-2.2
6,271,334	+		AO353_28820	0.43	-2.0
6,271,334	+		AO353_28820	0.43	+1.3
6,271,335	-		AO353_28820	0.43	+1.6
6,271,335	-		AO353_28820	0.43	+2.2
6,271,335	-		AO353_28820	0.43	+1.2
6,271,415	+		AO353_28820	0.53	-1.1
6,271,415	+		AO353_28820	0.53	+1.6
6,271,415	+		AO353_28820	0.53	-1.5
6,271,415	+		AO353_28820	0.53	-1.0
6,271,415	+		AO353_28820	0.53	-0.8
6,271,416	-		AO353_28820	0.54	+1.2
6,271,416	-		AO353_28820	0.54	-0.5
6,271,416	-		AO353_28820	0.54	-3.7
6,271,416	-		AO353_28820	0.54	-1.7
6,271,416	-		AO353_28820	0.54	+2.1
6,271,493	+		AO353_28820	0.64	+2.3
6,271,493	+		AO353_28820	0.64	+1.3
6,271,494	-		AO353_28820	0.64	+1.0
6,271,494	-		AO353_28820	0.64	+1.2
6,271,494	-		AO353_28820	0.64	+1.6
6,271,530	+		AO353_28820	0.69	-1.1
6,271,530	+		AO353_28820	0.69	+0.6
6,271,531	-		AO353_28820	0.69	-1.5