Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19385

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,247,442	+				-3.7
4,247,442	+				+0.6
4,247,442	+				+0.2
4,247,442	+				+2.0
4,247,442	+				-0.6
4,247,442	+				-0.8
4,247,443	-				-1.4
4,247,443	-				+0.3
4,247,443	-				-1.7
4,247,443	-				-1.5
4,247,443	-				+0.2
4,247,443	-				-2.6
4,247,443	-				-2.2
4,247,443	-				-1.6
4,247,443	-				-0.2
4,247,443	-				-1.6
4,247,443	-				+1.0
4,247,452	-				-1.7
4,247,452	-				-1.2
4,247,458	-				-2.0
4,247,545	-				-1.6
4,247,545	-				+1.1
4,247,545	-				-0.0
4,247,584	+				-1.9
4,247,584	+				-1.4
4,247,610	+				+0.6
4,247,610	+				-0.4
4,247,611	-				+3.0
4,247,611	-				+0.8
4,247,611	-				+1.9
4,247,624	+				+0.3
4,247,624	+				-0.4
4,247,624	+				-1.8
4,247,625	-				+1.0
4,247,625	-				-1.0
4,247,687	-				-0.3
4,247,706	+				-0.9
4,247,706	+				-1.4
4,247,707	-				+2.0
4,247,743	+		AO353_19380	0.10	+0.2
4,247,744	-		AO353_19380	0.10	-2.5
4,247,744	-		AO353_19380	0.10	+0.5
4,247,850	+		AO353_19380	0.32	+0.5
4,247,850	+		AO353_19380	0.32	-1.8
4,247,850	+		AO353_19380	0.32	+1.2
4,247,850	+		AO353_19380	0.32	+0.3
4,247,850	+		AO353_19380	0.32	-2.0
4,247,850	+		AO353_19380	0.32	-0.4
4,247,850	+		AO353_19380	0.32	-0.2
4,247,850	+		AO353_19380	0.32	+2.5
4,247,850	+		AO353_19380	0.32	+0.0
4,247,850	+		AO353_19380	0.32	-0.5
4,247,850	+		AO353_19380	0.32	-1.8
4,247,851	-				+0.4
4,247,851	-		AO353_19380	0.33	+2.8
4,247,851	-		AO353_19380	0.33	+1.3
4,247,851	-		AO353_19380	0.33	+1.0
4,247,851	-		AO353_19380	0.33	-0.7
4,247,851	-		AO353_19380	0.33	-0.3
4,247,851	-		AO353_19380	0.33	+1.6
4,247,851	-		AO353_19380	0.33	-0.8
4,247,851	-		AO353_19380	0.33	+3.4
4,247,851	-		AO353_19380	0.33	-0.2
4,247,851	-		AO353_19380	0.33	+2.6
4,247,851	-		AO353_19380	0.33	+0.0
4,247,851	-		AO353_19380	0.33	-0.2
4,247,879	+		AO353_19380	0.38	+0.2
4,247,879	+		AO353_19380	0.38	-2.5
4,247,880	-		AO353_19380	0.38	+0.4
4,247,880	-		AO353_19380	0.38	-1.8
4,247,958	-		AO353_19380	0.55	+0.5
4,248,137	-				-1.9
4,248,177	-				-0.1
4,248,196	+				-0.4
4,248,196	+				+0.3
4,248,196	+				+0.6
4,248,197	-				-1.3
4,248,197	-				-0.8
4,248,197	-				+1.9
4,248,197	-				-1.0
4,248,197	-				-0.0
4,248,232	+				+2.6
4,248,233	-				+1.8
4,248,233	-				-1.5
4,248,240	+				+0.3
4,248,240	+				-0.0
4,248,241	-				-1.4
4,248,241	-				-1.0
4,248,241	-				-0.9
4,248,241	-				+0.5
4,248,244	+				+0.4
4,248,244	+				+1.4
4,248,244	+				+0.1
4,248,244	+				+2.0
4,248,244	+				+0.8
4,248,245	-				+2.6
4,248,245	-				+0.7
4,248,312	+				-0.6
4,248,312	+				+1.2
4,248,313	-				-2.9
4,248,313	-				-2.3
4,248,403	+		AO353_19385	0.15	+1.7
4,248,403	+		AO353_19385	0.15	+2.6
4,248,403	+		AO353_19385	0.15	+1.7
4,248,404	-		AO353_19385	0.15	-0.1
4,248,404	-		AO353_19385	0.15	-0.2
4,248,404	-		AO353_19385	0.15	-1.5
4,248,404	-		AO353_19385	0.15	-0.4
4,248,528	+		AO353_19385	0.30	-0.0
4,248,528	+		AO353_19385	0.30	+1.1
4,248,528	+		AO353_19385	0.30	-0.3
4,248,528	+		AO353_19385	0.30	+0.9
4,248,528	+		AO353_19385	0.30	+1.5
4,248,528	+		AO353_19385	0.30	+1.2
4,248,528	+		AO353_19385	0.30	+0.2
4,248,528	+		AO353_19385	0.30	+0.5
4,248,529	-		AO353_19385	0.30	-0.0
4,248,529	-		AO353_19385	0.30	+1.5
4,248,529	-		AO353_19385	0.30	+2.0
4,248,529	-		AO353_19385	0.30	-0.3
4,248,529	-		AO353_19385	0.30	+0.1
4,248,529	-		AO353_19385	0.30	-1.3
4,248,529	-		AO353_19385	0.30	+1.0
4,248,529	-		AO353_19385	0.30	+0.9
4,248,529	-		AO353_19385	0.30	-2.0
4,248,529	-		AO353_19385	0.30	-1.0
4,248,529	-		AO353_19385	0.30	+1.8
4,248,529	-		AO353_19385	0.30	+0.4
4,248,574	-		AO353_19385	0.35	-0.9
4,248,738	+		AO353_19385	0.55	-1.3
4,248,783	+		AO353_19385	0.61	-2.7
4,248,801	+		AO353_19385	0.63	+2.7
4,248,801	+		AO353_19385	0.63	-0.3
4,248,802	-		AO353_19385	0.63	-1.2
4,248,802	-		AO353_19385	0.63	-0.3
4,248,802	-		AO353_19385	0.63	+3.0
4,248,802	-		AO353_19385	0.63	-0.9
4,248,802	-		AO353_19385	0.63	-1.3
4,248,802	-		AO353_19385	0.63	-2.2
4,248,958	+		AO353_19385	0.82	+0.3
4,248,958	+		AO353_19385	0.82	-2.3
4,248,959	-		AO353_19385	0.82	+0.3
4,248,974	+		AO353_19385	0.84	-0.5
4,248,974	+		AO353_19385	0.84	-1.1
4,248,974	+		AO353_19385	0.84	-2.2
4,248,975	-		AO353_19385	0.84	+1.8
4,249,005	+		AO353_19385	0.87	-0.7
4,249,006	-		AO353_19385	0.88	-1.5
4,249,006	-		AO353_19385	0.88	+1.0
4,249,006	-		AO353_19385	0.88	-1.4
4,249,098	+				-1.4
4,249,098	+				-2.0
4,249,098	+				-0.4
4,249,099	-				-0.6
4,249,099	-				-1.3
4,249,099	-				-0.1
4,249,099	-				+1.2
4,249,099	-				+0.0
4,249,099	-				+1.3
4,249,099	-				+2.3
4,249,099	-				+0.8
4,249,099	-				+0.2
4,249,130	+				+0.0
4,249,130	+				+0.9
4,249,137	-				+2.3
4,249,155	+				+0.2
4,249,155	+				-1.8
4,249,155	+				-1.3
4,249,155	+				+3.2
4,249,155	+				+1.0
4,249,155	+				+1.0
4,249,155	+				+0.1
4,249,156	-				+5.1
4,249,156	-				-1.6
4,249,156	-				-1.3
4,249,192	+				+0.1
4,249,193	-				+0.4
4,249,193	-				+0.1
4,249,234	-				-0.7
4,249,234	-				-1.6
4,249,234	-				-1.6
4,249,274	-				-0.4
4,249,397	-		AO353_19390	0.27	-1.1
4,249,453	+		AO353_19390	0.39	-0.4
4,249,453	+		AO353_19390	0.39	+2.5
4,249,454	-		AO353_19390	0.40	+0.7
4,249,477	+		AO353_19390	0.45	-1.1
4,249,477	+		AO353_19390	0.45	-1.0
4,249,477	+		AO353_19390	0.45	-1.8
4,249,477	+		AO353_19390	0.45	+0.6
4,249,477	+		AO353_19390	0.45	-1.7
4,249,477	+		AO353_19390	0.45	-1.8
4,249,477	+		AO353_19390	0.45	-0.9
4,249,478	-		AO353_19390	0.45	+1.9
4,249,478	-		AO353_19390	0.45	+1.1
4,249,478	-		AO353_19390	0.45	-1.6
4,249,478	-				+1.4
4,249,478	-		AO353_19390	0.45	+2.7
4,249,478	-		AO353_19390	0.45	+0.6
4,249,478	-		AO353_19390	0.45	+0.2
4,249,645	+		AO353_19390	0.81	+0.4
4,249,645	+		AO353_19390	0.81	+0.7
4,249,702	+				+0.6
4,249,743	+				-2.3
4,249,743	+				+0.7
4,249,744	-				-1.8
4,249,795	+				+1.2
4,249,795	+				+3.0
4,249,797	+				+0.7
4,249,797	+				+0.8
4,249,797	+				+0.7
4,249,797	+				-2.3
4,249,797	+				-0.3
4,249,797	+				+2.7
4,249,798	-				-0.8
4,249,798	-				-0.1
4,249,798	-				-1.8
4,249,798	-				-0.7
4,249,798	-				-1.0
4,249,798	-				+0.7
4,249,798	-				+0.8
4,249,798	-				-0.2
4,249,798	-				+3.6
4,249,798	-				-0.1
4,249,811	+				-0.6
4,249,811	+				-2.6
4,249,811	+				-1.5
4,249,812	-				-1.6
4,249,895	+				+2.3
4,249,895	+				-1.1
4,249,895	+				-0.4
4,249,895	+				+2.9
4,249,896	-				+1.9
4,249,896	-				-0.2
4,249,896	-				-1.1
4,249,973	+				-1.0
4,250,034	+				-0.6
4,250,104	+		AO353_19395	0.32	+0.6
4,250,104	+		AO353_19395	0.32	+0.7
4,250,104	+		AO353_19395	0.32	+0.7
4,250,105	-		AO353_19395	0.33	+0.9
4,250,105	-		AO353_19395	0.33	+2.3
4,250,105	-		AO353_19395	0.33	+1.2
4,250,106	+		AO353_19395	0.33	-1.7
4,250,107	-		AO353_19395	0.33	+2.7