Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18205

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,008,754	+		AO353_18200	0.24	-0.6
4,008,754	+		AO353_18200	0.24	-1.3
4,008,754	+		AO353_18200	0.24	+0.3
4,008,755	-		AO353_18200	0.24	+2.6
4,008,755	-		AO353_18200	0.24	-0.6
4,008,755	-		AO353_18200	0.24	-0.7
4,008,755	-		AO353_18200	0.24	-2.3
4,008,755	-		AO353_18200	0.24	-1.2
4,008,763	+		AO353_18200	0.25	+3.2
4,008,763	+		AO353_18200	0.25	-0.3
4,008,763	+		AO353_18200	0.25	-1.5
4,008,763	+		AO353_18200	0.25	-0.8
4,008,763	+		AO353_18200	0.25	+0.1
4,008,829	+		AO353_18200	0.30	+0.9
4,008,829	+		AO353_18200	0.30	-1.6
4,008,830	-		AO353_18200	0.30	-1.0
4,008,947	+		AO353_18200	0.40	+1.8
4,008,947	+		AO353_18200	0.40	+0.8
4,008,948	-		AO353_18200	0.40	+5.0
4,008,948	-		AO353_18200	0.40	+0.0
4,008,988	+		AO353_18200	0.44	+0.9
4,008,988	+		AO353_18200	0.44	+0.0
4,008,989	-		AO353_18200	0.44	+0.2
4,008,989	-		AO353_18200	0.44	-0.7
4,008,989	-		AO353_18200	0.44	-0.6
4,009,037	+		AO353_18200	0.48	+0.1
4,009,037	+		AO353_18200	0.48	+1.4
4,009,038	-		AO353_18200	0.48	+2.2
4,009,038	-		AO353_18200	0.48	-0.9
4,009,038	-		AO353_18200	0.48	+0.4
4,009,038	-		AO353_18200	0.48	+0.8
4,009,038	-		AO353_18200	0.48	+1.0
4,009,528	+		AO353_18200	0.89	-0.8
4,009,528	+		AO353_18200	0.89	-1.4
4,009,528	+		AO353_18200	0.89	+1.5
4,009,528	+		AO353_18200	0.89	-0.4
4,009,529	-		AO353_18200	0.89	-0.2
4,009,603	+				+1.5
4,009,603	+				+0.9
4,009,603	+				-1.0
4,009,603	+				+0.3
4,009,604	-				+1.1
4,009,604	-				+0.4
4,009,604	-				+2.1
4,009,604	-				-1.6
4,009,604	-				-1.1
4,009,604	-				+1.1
4,009,604	-				+2.4
4,009,604	-				-1.3
4,009,604	-				-2.1
4,009,604	-				-3.1
4,009,640	+				+1.8
4,009,640	+				-2.0
4,009,640	+				+0.6
4,009,640	+				+2.5
4,009,640	+				+1.4
4,009,641	-				-1.7
4,009,641	-				+0.4
4,009,643	+				-0.7
4,009,643	+				+1.6
4,009,643	+				+0.4
4,009,643	+				+0.1
4,009,643	+				-1.2
4,009,643	+				+0.4
4,009,643	+				-0.3
4,009,643	+				+2.5
4,009,643	+				-1.9
4,009,643	+				-0.7
4,009,643	+				-2.2
4,009,643	+				-0.8
4,009,643	+				+2.4
4,009,643	+				-0.3
4,009,644	-				-1.3
4,009,644	-				+1.3
4,009,644	-				-0.9
4,009,644	-				-0.4
4,009,644	-				+2.2
4,009,644	-				+0.3
4,009,644	-				+2.0
4,009,644	-				-1.3
4,009,644	-				-1.7
4,009,644	-				-0.8
4,009,644	-				+0.8
4,009,644	-				+4.4
4,009,644	-				+0.5
4,009,644	-				+1.0
4,009,939	-		AO353_18205	0.11	+4.8
4,009,939	-		AO353_18205	0.11	+10.0
4,010,111	+		AO353_18205	0.17	+1.5
4,010,111	+		AO353_18205	0.17	-0.8
4,010,111	+		AO353_18205	0.17	+1.8
4,010,112	-		AO353_18205	0.17	+6.6
4,010,112	-		AO353_18205	0.17	+7.0
4,010,112	-		AO353_18205	0.17	+8.7
4,010,112	-		AO353_18205	0.17	+3.4
4,010,112	-		AO353_18205	0.17	+2.4
4,010,112	-		AO353_18205	0.17	+6.7
4,010,160	-		AO353_18205	0.18	+3.8
4,010,160	-		AO353_18205	0.18	+6.3
4,010,478	+		AO353_18205	0.30	-1.2
4,010,479	-		AO353_18205	0.30	+3.3
4,010,547	+		AO353_18205	0.32	+1.6
4,010,547	+		AO353_18205	0.32	-1.3
4,010,548	-		AO353_18205	0.32	+5.2
4,010,548	-		AO353_18205	0.32	+2.7
4,010,548	-		AO353_18205	0.32	+3.3
4,010,548	-		AO353_18205	0.32	-0.0
4,010,548	-		AO353_18205	0.32	+1.5
4,010,567	+		AO353_18205	0.33	+2.2
4,010,568	-		AO353_18205	0.33	+1.6
4,010,568	-		AO353_18205	0.33	+3.2
4,010,733	-		AO353_18205	0.39	-1.5
4,010,801	+		AO353_18205	0.41	-1.1
4,010,801	+		AO353_18205	0.41	-0.9
4,010,801	+		AO353_18205	0.41	+0.6
4,010,802	-		AO353_18205	0.41	+2.7
4,010,884	-		AO353_18205	0.44	+5.3
4,010,951	-		AO353_18205	0.46	+1.3
4,010,984	+		AO353_18205	0.48	+1.4
4,010,984	+		AO353_18205	0.48	+1.1
4,010,985	-		AO353_18205	0.48	+3.7
4,010,985	-		AO353_18205	0.48	+3.9
4,010,985	-		AO353_18205	0.48	+3.4
4,010,985	-		AO353_18205	0.48	+1.5
4,011,047	+		AO353_18205	0.50	-1.0
4,011,048	-		AO353_18205	0.50	+1.3
4,011,048	-		AO353_18205	0.50	+3.9
4,011,048	-		AO353_18205	0.50	+4.9
4,011,206	+		AO353_18205	0.55	-1.0
4,011,206	+		AO353_18205	0.55	+0.8
4,011,230	+		AO353_18205	0.56	-1.4
4,011,231	-		AO353_18205	0.56	+4.7
4,011,261	-		AO353_18205	0.57	+3.6
4,011,299	+		AO353_18205	0.59	-0.7
4,011,299	+		AO353_18205	0.59	-0.7
4,011,299	+		AO353_18205	0.59	-0.2
4,011,299	+		AO353_18205	0.59	+0.3
4,011,300	-		AO353_18205	0.59	+2.8
4,011,300	-		AO353_18205	0.59	+1.5
4,011,300	-		AO353_18205	0.59	+5.6
4,011,471	+		AO353_18205	0.65	+0.1
4,011,492	+		AO353_18205	0.66	-2.1
4,011,492	+		AO353_18205	0.66	-0.3
4,011,493	-		AO353_18205	0.66	+4.6
4,011,493	-		AO353_18205	0.66	-1.6
4,011,614	+		AO353_18205	0.70	-1.5
4,011,614	+		AO353_18205	0.70	-1.6
4,011,614	+		AO353_18205	0.70	+1.6
4,011,614	+		AO353_18205	0.70	-0.4
4,011,615	-		AO353_18205	0.70	+0.4
4,011,615	-		AO353_18205	0.70	+2.3
4,011,615	-		AO353_18205	0.70	-0.7
4,011,615	-		AO353_18205	0.70	+0.7
4,011,615	-		AO353_18205	0.70	+3.6
4,011,899	+		AO353_18205	0.80	-0.5
4,011,899	+		AO353_18205	0.80	+0.8
4,011,957	+		AO353_18205	0.82	-0.3
4,011,957	+		AO353_18205	0.82	+0.3
4,011,957	+		AO353_18205	0.82	+1.0
4,011,957	+		AO353_18205	0.82	+2.1
4,011,957	+		AO353_18205	0.82	+1.8
4,011,958	-		AO353_18205	0.82	+2.3
4,011,958	-		AO353_18205	0.82	+3.6
4,012,029	+		AO353_18205	0.85	+0.7
4,012,030	-		AO353_18205	0.85	+1.6
4,012,030	-		AO353_18205	0.85	+2.6
4,012,030	-		AO353_18205	0.85	+2.7
4,012,031	+		AO353_18205	0.85	+2.9
4,012,031	+		AO353_18205	0.85	+1.0
4,012,031	+		AO353_18205	0.85	+0.9
4,012,031	+		AO353_18205	0.85	+0.5
4,012,031	+		AO353_18205	0.85	-0.4
4,012,032	-		AO353_18205	0.85	+1.7
4,012,032	-		AO353_18205	0.85	+1.7
4,012,032	-		AO353_18205	0.85	+1.7
4,012,032	-		AO353_18205	0.85	+1.3
4,012,032	-		AO353_18205	0.85	+2.1
4,012,032	-		AO353_18205	0.85	+0.4
4,012,070	+		AO353_18205	0.86	+0.6
4,012,070	+		AO353_18205	0.86	+1.5
4,012,070	+		AO353_18205	0.86	+1.3
4,012,070	+		AO353_18205	0.86	+1.1
4,012,071	-		AO353_18205	0.86	+8.7
4,012,071	-		AO353_18205	0.86	+3.5
4,012,071	-		AO353_18205	0.86	+6.9
4,012,071	-		AO353_18205	0.86	+4.5
4,012,071	-		AO353_18205	0.86	+6.5
4,012,071	-		AO353_18205	0.86	+3.6
4,012,071	-		AO353_18205	0.86	+7.4
4,012,071	-		AO353_18205	0.86	-0.6
4,012,071	-		AO353_18205	0.86	+4.3
4,012,101	-		AO353_18205	0.87	+6.8
4,012,195	+				-1.6
4,012,228	+				-0.3
4,012,228	+				+0.6
4,012,228	+				-1.1
4,012,229	-				-0.8
4,012,229	-				+3.8
4,012,229	-				+1.1
4,012,229	-				+0.9
4,012,229	-				+3.1
4,012,229	-				+1.2
4,012,229	-				-1.1
4,012,229	-				+7.9
4,012,346	+				+0.1
4,012,347	-				-2.2
4,012,360	+				-0.6
4,012,360	+				-1.3
4,012,361	-				+2.9
4,012,361	-				+1.6
4,012,361	-				-0.3
4,012,378	+				-0.1
4,012,378	+				+1.3
4,012,378	+				+1.8
4,012,379	-				-1.0
4,012,379	-				+0.3
4,012,448	+				+1.1
4,012,448	+				-2.0
4,012,449	-				-1.3
4,012,449	-				+1.8
4,012,449	-				-0.6
4,012,449	-				-0.7
4,012,449	-				-1.0
4,012,531	+				-1.4
4,012,531	+				-2.3
4,012,531	+				-0.8
4,012,531	+				+1.3
4,012,531	+				+1.7
4,012,532	-				+2.2
4,012,533	+				+0.6
4,012,533	+				+1.4
4,012,533	+				-0.1
4,012,533	+				-0.3
4,012,533	+				+3.1
4,012,533	+				-1.5
4,012,533	+				-0.1
4,012,533	+				+0.8
4,012,533	+				+2.0
4,012,533	+				+1.8
4,012,533	+				+0.2
4,012,533	+				+1.6
4,012,533	+				-1.0
4,012,533	+				-1.7
4,012,534	-				-1.3
4,012,534	-				+1.9
4,012,534	-				+0.3
4,012,534	-				+0.8
4,012,534	-				-1.6
4,012,534	-				+1.1
4,012,534	-				+1.7
4,012,534	-				+2.3
4,012,534	-				-0.1
4,012,534	-				-0.1
4,012,545	+				+0.7
4,012,545	+				+2.1
4,012,545	+				-1.6
4,012,545	+				+0.1
4,012,549	+				+0.5
4,012,549	+				+2.1
4,012,550	-				+1.5
4,012,550	-				-0.1
4,012,550	-				+1.3
4,012,550	-				+7.4
4,012,602	-				-1.8
4,012,602	-				-0.7
4,012,654	+				-0.3
4,012,660	+				-0.3
4,012,660	+				+0.9
4,012,661	-				+0.3
4,012,661	-				+0.2
4,012,661	-				+0.6
4,012,661	-				+1.5
4,012,663	+				-0.1
4,012,663	+				-0.4
4,012,663	+				+0.1
4,012,663	+				-1.3
4,012,663	+				+1.3
4,012,663	+				-0.8
4,012,663	+				-0.7
4,012,664	-				+0.9
4,012,664	-				-0.1
4,012,664	-				-0.3
4,012,681	+				-2.1
4,012,681	+				+2.1
4,012,697	+				-0.7
4,012,698	-				+1.1
4,012,698	-				+0.4
4,012,800	+				-0.5
4,012,833	+				+1.7
4,012,833	+				-0.7
4,012,833	+				-0.2
4,012,875	+				+0.3
4,012,875	+				+3.4
4,012,875	+				+0.5
4,012,875	+				+0.7
4,012,876	-				+0.4
4,012,876	-				-0.8
4,012,876	-				-0.6
4,012,876	-				+1.8
4,012,876	-				+0.6
4,012,884	-				-0.9
4,012,945	+				-0.4
4,012,946	-				-0.6
4,012,946	-				+0.3
4,012,947	+				+1.2
4,012,948	-				-0.6
4,012,948	-				-1.6
4,012,948	-				+1.1
4,012,984	-				+3.1
4,012,984	-				-0.6
4,012,996	+				-1.2
4,012,996	+				+1.7
4,012,996	+				+4.2
4,012,996	+				+1.2
4,012,997	-				-0.6
4,012,997	-				+0.5
4,012,997	-				+0.6
4,012,997	-				-0.5
4,013,049	+				+1.5
4,013,098	+				+2.3
4,013,099	-				-0.3
4,013,163	+				+0.2
4,013,164	-				-1.2
4,013,164	-				-1.4
4,013,169	+				-1.8
4,013,169	+				-0.8
4,013,169	+				-1.1
4,013,170	-				+1.2
4,013,170	-				+2.1
4,013,170	-				-1.3
4,013,170	-				-2.5
4,013,170	-				+0.3
4,013,170	-				-1.2
4,013,175	+				+0.1
4,013,175	+				+4.3
4,013,175	+				-1.8
4,013,292	+				+2.5
4,013,293	-				-0.8
4,013,314	+				+2.1
4,013,338	-				-1.1
4,013,338	-				+1.4
4,013,416	-				-0.3