Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16035

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,542,030	-		AO353_16025	0.38	+1.9
3,542,114	+		AO353_16025	0.51	-0.1
3,542,114	+		AO353_16025	0.51	+0.8
3,542,115	-		AO353_16025	0.51	-0.6
3,542,152	+		AO353_16025	0.57	-1.5
3,542,152	+		AO353_16025	0.57	-1.7
3,542,152	+		AO353_16025	0.57	-0.8
3,542,153	-		AO353_16025	0.57	+2.1
3,542,153	-		AO353_16025	0.57	-1.0
3,542,164	+		AO353_16025	0.59	-1.1
3,542,164	+		AO353_16025	0.59	+0.7
3,542,164	+		AO353_16025	0.59	-1.1
3,542,165	-		AO353_16025	0.59	+0.8
3,542,380	+				+0.9
3,542,380	+				-0.9
3,542,496	+		AO353_16030	0.17	-1.4
3,542,496	+		AO353_16030	0.17	+0.3
3,542,496	+		AO353_16030	0.17	-0.9
3,542,496	+		AO353_16030	0.17	+0.9
3,542,496	+		AO353_16030	0.17	-0.4
3,542,497	-		AO353_16030	0.17	-1.0
3,542,497	-		AO353_16030	0.17	-1.1
3,542,497	-		AO353_16030	0.17	-2.3
3,542,497	-		AO353_16030	0.17	+1.4
3,542,497	-		AO353_16030	0.17	-1.8
3,542,497	-		AO353_16030	0.17	+0.4
3,542,595	+		AO353_16030	0.42	-3.4
3,542,596	-		AO353_16030	0.42	-1.4
3,542,974	+				+1.0
3,542,974	+				+0.3
3,542,975	-				+1.2
3,542,975	-				+0.2
3,543,005	+				-0.5
3,543,005	+				+2.1
3,543,005	+				+1.2
3,543,014	+				+0.6
3,543,014	+				+2.3
3,543,014	+				-1.3
3,543,015	-				+0.6
3,543,015	-				-0.4
3,543,074	+				+3.0
3,543,075	-				+2.6
3,543,092	-				+5.3
3,543,092	-				-0.4
3,543,122	+				+2.6
3,543,123	-				-0.8
3,543,123	-				-0.2
3,543,294	+		AO353_16035	0.11	+2.7
3,543,336	+		AO353_16035	0.13	+1.7
3,543,336	+		AO353_16035	0.13	+3.7
3,543,337	-		AO353_16035	0.13	+1.7
3,543,337	-		AO353_16035	0.13	+0.3
3,543,337	-		AO353_16035	0.13	+0.6
3,543,337	-		AO353_16035	0.13	+2.0
3,543,337	-		AO353_16035	0.13	+1.8
3,543,409	+		AO353_16035	0.16	+0.6
3,543,409	+		AO353_16035	0.16	+1.8
3,543,409	+		AO353_16035	0.16	+3.2
3,543,409	+		AO353_16035	0.16	+3.2
3,543,409	+		AO353_16035	0.16	-0.4
3,543,409	+		AO353_16035	0.16	+1.9
3,543,409	+		AO353_16035	0.16	+2.1
3,543,410	-		AO353_16035	0.16	+2.7
3,543,410	-		AO353_16035	0.16	-0.8
3,543,410	-		AO353_16035	0.16	-1.0
3,543,410	-		AO353_16035	0.16	+1.6
3,543,410	-		AO353_16035	0.16	+7.2
3,543,410	-		AO353_16035	0.16	+3.5
3,543,410	-		AO353_16035	0.16	-0.6
3,543,410	-		AO353_16035	0.16	+5.3
3,543,410	-		AO353_16035	0.16	+3.0
3,543,416	-		AO353_16035	0.16	-0.4
3,543,711	+		AO353_16035	0.28	+4.4
3,543,731	-		AO353_16035	0.29	+1.7
3,543,856	+		AO353_16035	0.34	+3.7
3,543,856	+		AO353_16035	0.34	-1.4
3,543,856	+		AO353_16035	0.34	+2.3
3,543,856	+		AO353_16035	0.34	-0.8
3,543,970	+		AO353_16035	0.39	-1.2
3,543,970	+		AO353_16035	0.39	+1.9
3,543,971	-		AO353_16035	0.39	-0.5
3,544,145	-		AO353_16035	0.46	+3.9
3,544,145	-		AO353_16035	0.46	+4.3
3,544,145	-		AO353_16035	0.46	+4.4
3,544,145	-		AO353_16035	0.46	+2.9
3,544,145	-		AO353_16035	0.46	+0.7
3,544,145	-		AO353_16035	0.46	+0.2
3,544,145	-		AO353_16035	0.46	-0.4
3,544,145	-		AO353_16035	0.46	+1.2
3,544,145	-		AO353_16035	0.46	+0.4
3,544,204	+		AO353_16035	0.49	+1.8
3,544,204	+		AO353_16035	0.49	+1.6
3,544,205	-		AO353_16035	0.49	+0.4
3,544,309	+		AO353_16035	0.53	+2.8
3,544,309	+		AO353_16035	0.53	+3.6
3,544,309	+		AO353_16035	0.53	-1.5
3,544,420	+		AO353_16035	0.58	+2.0
3,544,456	+		AO353_16035	0.59	+4.3
3,544,456	+		AO353_16035	0.59	+2.6
3,544,457	-		AO353_16035	0.59	+4.5
3,544,474	+		AO353_16035	0.60	+4.1
3,544,882	+		AO353_16035	0.77	-0.9
3,544,882	+		AO353_16035	0.77	+2.8
3,544,882	+		AO353_16035	0.77	+4.0
3,544,882	+		AO353_16035	0.77	-2.2
3,544,883	-		AO353_16035	0.77	-0.5
3,544,883	-		AO353_16035	0.77	+4.4
3,544,903	+		AO353_16035	0.78	-2.0
3,544,903	+		AO353_16035	0.78	+3.6
3,544,904	-		AO353_16035	0.78	-0.6
3,544,904	-		AO353_16035	0.78	+0.6
3,545,017	+		AO353_16035	0.82	+1.0
3,545,017	+		AO353_16035	0.82	+3.7
3,545,018	-		AO353_16035	0.82	+3.3
3,545,018	-		AO353_16035	0.82	+0.2
3,545,055	+		AO353_16035	0.84	+1.5
3,545,277	+				+2.3
3,545,277	+				+1.0
3,545,278	-				+0.6
3,545,278	-				+0.0
3,545,278	-				-0.1
3,545,278	-				+1.0
3,545,278	-				+1.9
3,545,320	+				-0.9
3,545,320	+				+1.6
3,545,320	+				+2.6
3,545,320	+				+2.0
3,545,321	-				+0.2
3,545,321	-				+1.9
3,545,321	-				+1.2
3,545,404	+				+2.8
3,545,405	-				+1.3
3,545,466	-				+3.6
3,545,474	+				-0.0
3,545,474	+				+2.5
3,545,474	+				+0.5
3,545,474	+				+2.4
3,545,474	+				+1.4
3,545,474	+				+2.1
3,545,474	+				+2.0
3,545,474	+				+2.8
3,545,474	+				-1.6
3,545,475	-				-1.5
3,545,475	-				-2.0
3,545,475	-				+1.1
3,545,531	+				+0.7
3,545,531	+				-0.4
3,545,531	+				-0.2
3,545,531	+				-0.3
3,545,531	+				+0.7
3,545,532	-				+2.3
3,545,532	-				-1.2
3,545,532	-				-0.5
3,545,532	-				-0.2
3,545,532	-				-1.3
3,545,538	+				+1.0
3,545,538	+				-0.3
3,545,538	+				+0.4
3,545,538	+				+0.3
3,545,538	+				-1.5
3,545,538	+				-0.5
3,545,539	-				-0.7
3,545,539	-				-0.0
3,545,539	-				+0.8
3,545,539	-				-0.4
3,545,539	-				+0.1
3,545,539	-				-0.9
3,545,539	-				+1.4
3,545,539	-				-0.3
3,545,539	-				-0.6
3,545,539	-				-0.2
3,545,539	-				+0.9
3,545,539	-				-0.7
3,545,539	-				-2.8
3,545,550	+				-0.4
3,545,550	+				+1.5
3,545,550	+				+1.5
3,545,550	+				+1.6
3,545,550	+				-0.6
3,545,550	+				+1.3
3,545,550	+				+0.4
3,545,550	+				+3.1
3,545,550	+				+2.1
3,545,550	+				+2.0
3,545,550	+				+2.3
3,545,551	-				+0.1
3,545,551	-				-2.2
3,545,551	-				+1.0
3,545,551	-				+0.0
3,545,551	-				+0.9
3,545,551	-				+0.4
3,545,551	-				-2.4
3,545,551	-				-1.6
3,545,551	-				+0.6
3,545,551	-				-0.0
3,545,551	-				+0.8
3,545,551	-				+0.1
3,545,555	+				-1.5
3,545,555	+				+2.4
3,545,555	+				+2.1
3,545,556	-				+0.6
3,545,556	-				-1.5
3,545,599	+				-0.4
3,545,599	+				-0.5
3,545,599	+				-1.2
3,545,599	+				-0.0
3,545,599	+				-0.0
3,545,599	+				-2.0
3,545,600	-				-0.6
3,545,600	-				+1.4
3,545,600	-				-1.3
3,545,614	+				-0.2
3,545,614	+				-0.6
3,545,614	+				-0.6
3,545,615	-				-0.1
3,545,615	-				+0.3
3,545,615	-				+3.2
3,545,615	-				-0.3
3,545,615	-				-0.2
3,545,615	-				+1.1
3,545,615	-				+1.2
3,545,686	+				-0.4
3,545,686	+				+1.0
3,545,687	-				+0.3
3,545,687	-				-1.8
3,545,687	-				+0.8
3,545,687	-				-1.5
3,545,687	-				+0.4
3,545,687	-				-0.4
3,545,687	-				+2.0
3,545,687	-				+2.4
3,545,687	-				-0.7
3,545,687	-				-1.1
3,545,687	-				+0.4
3,545,687	-				-1.2
3,545,687	-				+1.9
3,545,687	-				-2.4
3,545,687	-				-0.4
3,545,687	-				+0.1
3,545,687	-				+1.4
3,545,691	-				+1.3
3,545,691	-				+1.4
3,545,691	-				+1.3
3,545,691	-				+1.7
3,545,691	-				-1.1
3,545,691	-				-2.8
3,546,032	+				-1.0
3,546,032	+				+0.3
3,546,044	+				+0.0
3,546,044	+				-0.1
3,546,044	+				-2.2
3,546,045	-				+1.0
3,546,045	-				-0.6
3,546,045	-				+1.0
3,546,045	-				+0.1
3,546,045	-				-1.3
3,546,045	-				-0.7
3,546,045	-				+0.4
3,546,053	+				+0.1
3,546,054	-				+0.8
3,546,054	-				+2.0
3,546,054	-				-1.0
3,546,098	-				-1.2
3,546,361	+		AO353_16040	0.71	+0.0
3,546,361	+		AO353_16040	0.71	-1.4
3,546,362	-		AO353_16040	0.72	+2.5
3,546,418	+		AO353_16040	0.87	-2.9
3,546,418	+		AO353_16040	0.87	-0.2
3,546,419	-		AO353_16040	0.87	-1.2