Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15430

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,408,777	+				+1.0
3,408,777	+				-0.7
3,408,777	+				+0.8
3,408,778	-				-1.6
3,408,778	-				-2.0
3,408,778	-				-0.6
3,408,778	-				+0.4
3,408,778	-				-0.6
3,408,794	+				-1.0
3,408,794	+				+0.4
3,408,794	+				-0.7
3,408,893	+				-2.6
3,408,893	+				-1.1
3,408,893	+				-1.1
3,408,894	-				+0.4
3,408,894	-				-0.2
3,408,894	-				-1.9
3,408,894	-				-0.7
3,408,914	-				+2.0
3,408,914	-				+1.4
3,408,914	-				-1.3
3,408,915	+				+4.0
3,408,915	+				-1.9
3,408,915	+				-2.0
3,408,916	-		AO353_15420	0.10	-0.3
3,408,916	-		AO353_15420	0.10	+0.6
3,408,916	-		AO353_15420	0.10	+1.6
3,408,916	-		AO353_15420	0.10	-0.8
3,408,916	-		AO353_15420	0.10	-1.3
3,408,916	-		AO353_15420	0.10	+2.1
3,408,925	+		AO353_15420	0.13	+2.0
3,408,926	-		AO353_15420	0.13	-0.6
3,408,939	+		AO353_15420	0.18	-2.7
3,408,939	+		AO353_15420	0.18	+0.4
3,408,940	-		AO353_15420	0.18	-1.6
3,408,940	-		AO353_15420	0.18	+0.4
3,408,940	-		AO353_15420	0.18	+0.8
3,408,940	-		AO353_15420	0.18	-2.0
3,408,940	-		AO353_15420	0.18	-1.7
3,408,940	-		AO353_15420	0.18	-0.9
3,408,940	-		AO353_15420	0.18	+1.3
3,408,940	-		AO353_15420	0.18	+2.6
3,408,973	+		AO353_15420	0.29	+0.4
3,408,973	+		AO353_15420	0.29	-1.5
3,408,973	+		AO353_15420	0.29	+0.2
3,408,973	+				+1.1
3,408,973	+		AO353_15420	0.29	+1.6
3,408,973	+		AO353_15420	0.29	-0.5
3,408,973	+		AO353_15420	0.29	+1.0
3,408,974	-		AO353_15420	0.29	+0.8
3,408,974	-		AO353_15420	0.29	-2.2
3,408,974	-		AO353_15420	0.29	-1.6
3,408,974	-		AO353_15420	0.29	+1.2
3,408,974	-		AO353_15420	0.29	+0.8
3,408,974	-		AO353_15420	0.29	-0.0
3,408,974	-		AO353_15420	0.29	+0.5
3,409,013	-		AO353_15420	0.41	-2.6
3,409,013	-		AO353_15420	0.41	+1.0
3,409,015	-		AO353_15420	0.42	-0.0
3,409,132	+		AO353_15420	0.79	+0.1
3,409,132	+		AO353_15420	0.79	-2.2
3,409,132	+		AO353_15420	0.79	-0.1
3,409,175	+				+0.8
3,409,176	-				+1.0
3,409,176	-				+1.7
3,409,176	-				+0.7
3,409,236	+				-0.6
3,409,236	+				+0.6
3,409,236	+				-2.5
3,409,236	+				+0.6
3,409,237	-				+1.8
3,409,237	-				+1.4
3,409,237	-				+2.0
3,409,237	-				-1.4
3,409,237	-				-0.0
3,409,285	+				-1.0
3,409,336	+		AO353_15425	0.10	+0.7
3,409,336	+		AO353_15425	0.10	-1.0
3,409,336	+		AO353_15425	0.10	-0.5
3,409,336	+		AO353_15425	0.10	-1.3
3,409,337	-		AO353_15425	0.10	-1.1
3,409,337	-		AO353_15425	0.10	-0.2
3,409,337	-		AO353_15425	0.10	+1.2
3,409,337	-		AO353_15425	0.10	+0.1
3,409,337	-		AO353_15425	0.10	+0.0
3,409,358	+		AO353_15425	0.15	-1.0
3,409,359	-		AO353_15425	0.15	+0.7
3,409,486	+		AO353_15425	0.41	+0.0
3,409,486	+		AO353_15425	0.41	-0.3
3,409,486	+		AO353_15425	0.41	-1.7
3,409,486	+		AO353_15425	0.41	-1.7
3,409,486	+		AO353_15425	0.41	-0.4
3,409,486	+		AO353_15425	0.41	-1.4
3,409,486	+		AO353_15425	0.41	+1.4
3,409,486	+		AO353_15425	0.41	+1.6
3,409,486	+		AO353_15425	0.41	+0.5
3,409,486	+		AO353_15425	0.41	-1.0
3,409,486	+		AO353_15425	0.41	+1.6
3,409,486	+		AO353_15425	0.41	+0.7
3,409,487	-		AO353_15425	0.41	-0.5
3,409,487	-		AO353_15425	0.41	-1.1
3,409,487	-		AO353_15425	0.41	-0.9
3,409,487	-		AO353_15425	0.41	+0.2
3,409,487	-		AO353_15425	0.41	+0.3
3,409,487	-		AO353_15425	0.41	-1.4
3,409,561	+		AO353_15425	0.57	-2.0
3,409,561	+		AO353_15425	0.57	-0.3
3,409,562	-		AO353_15425	0.57	+1.2
3,409,630	+		AO353_15425	0.71	+0.8
3,409,756	+				-2.6
3,409,756	+				+3.8
3,409,756	+				+0.4
3,409,756	+				-1.9
3,409,756	+				-0.2
3,409,756	+				-0.9
3,409,757	-				+0.3
3,409,757	-				+1.3
3,409,757	-				-1.8
3,409,757	-				+0.5
3,409,757	-				-1.6
3,409,757	-				-1.4
3,409,757	-				-1.6
3,409,757	-				+0.7
3,409,928	+		AO353_15430	0.17	-0.4
3,409,928	+		AO353_15430	0.17	-0.9
3,409,930	+		AO353_15430	0.17	-1.4
3,409,930	+		AO353_15430	0.17	+1.5
3,409,930	+		AO353_15430	0.17	-2.0
3,409,930	+		AO353_15430	0.17	-0.6
3,409,930	+		AO353_15430	0.17	-3.1
3,409,930	+		AO353_15430	0.17	-0.9
3,409,930	+		AO353_15430	0.17	+0.4
3,409,930	+		AO353_15430	0.17	+0.0
3,409,930	+				-0.2
3,409,930	+		AO353_15430	0.17	+0.4
3,409,930	+		AO353_15430	0.17	-1.0
3,409,930	+		AO353_15430	0.17	-1.9
3,409,930	+		AO353_15430	0.17	-4.0
3,409,930	+		AO353_15430	0.17	+1.5
3,409,930	+		AO353_15430	0.17	-1.4
3,409,930	+		AO353_15430	0.17	-1.0
3,409,930	+		AO353_15430	0.17	+0.6
3,409,930	+		AO353_15430	0.17	-2.7
3,409,930	+		AO353_15430	0.17	-1.0
3,409,930	+		AO353_15430	0.17	-0.5
3,409,930	+		AO353_15430	0.17	-0.0
3,409,930	+		AO353_15430	0.17	-1.9
3,409,930	+		AO353_15430	0.17	+1.4
3,409,930	+		AO353_15430	0.17	+0.1
3,409,930	+		AO353_15430	0.17	-1.4
3,409,930	+		AO353_15430	0.17	+1.2
3,409,930	+		AO353_15430	0.17	-0.5
3,409,930	+		AO353_15430	0.17	+0.3
3,409,930	+		AO353_15430	0.17	-0.6
3,409,930	+		AO353_15430	0.17	+1.3
3,409,931	-		AO353_15430	0.17	-0.0
3,409,931	-		AO353_15430	0.17	-0.5
3,409,931	-		AO353_15430	0.17	-0.4
3,409,931	-		AO353_15430	0.17	+0.5
3,409,931	-		AO353_15430	0.17	-1.4
3,409,931	-		AO353_15430	0.17	-0.2
3,409,931	-		AO353_15430	0.17	-1.2
3,409,931	-		AO353_15430	0.17	-1.4
3,409,931	-		AO353_15430	0.17	-0.5
3,409,931	-		AO353_15430	0.17	+1.3
3,409,931	-		AO353_15430	0.17	-1.1
3,409,931	-		AO353_15430	0.17	-1.1
3,409,931	-		AO353_15430	0.17	-1.0
3,409,931	-		AO353_15430	0.17	+0.6
3,409,931	-		AO353_15430	0.17	-1.1
3,409,931	-		AO353_15430	0.17	-3.1
3,409,931	-		AO353_15430	0.17	+0.1
3,409,931	-		AO353_15430	0.17	-1.3
3,409,931	-		AO353_15430	0.17	-2.0
3,409,931	-		AO353_15430	0.17	-1.0
3,409,931	-		AO353_15430	0.17	-1.7
3,410,122	-		AO353_15430	0.38	+0.8
3,410,122	-		AO353_15430	0.38	-1.0
3,410,182	-		AO353_15430	0.45	-2.0
3,410,182	-		AO353_15430	0.45	+2.0
3,410,182	-		AO353_15430	0.45	-0.5
3,410,311	+		AO353_15430	0.59	-2.1
3,410,311	+		AO353_15430	0.59	-0.6
3,410,311	+		AO353_15430	0.59	-1.3
3,410,311	+		AO353_15430	0.59	-0.5
3,410,311	+		AO353_15430	0.59	-2.0
3,410,311	+		AO353_15430	0.59	+3.0
3,410,311	+		AO353_15430	0.59	+1.2
3,410,311	+		AO353_15430	0.59	-0.6
3,410,311	+		AO353_15430	0.59	+0.1
3,410,312	-		AO353_15430	0.59	-0.1
3,410,312	-		AO353_15430	0.59	-0.9
3,410,312	-		AO353_15430	0.59	-2.1
3,410,312	-		AO353_15430	0.59	-1.6
3,410,312	-		AO353_15430	0.59	-2.3
3,410,312	-		AO353_15430	0.59	-2.5
3,410,531	+		AO353_15430	0.83	-0.0
3,410,634	-				-0.6
3,410,634	-				+1.1
3,410,681	+				-1.9
3,410,681	+				+0.4
3,410,681	+				-3.0
3,410,681	+				-1.6
3,410,681	+				-3.1
3,410,681	+				+2.4
3,410,682	-				+1.6
3,410,682	-				-2.2
3,410,682	-				-1.3
3,410,682	-				-0.5
3,410,682	-				+0.2
3,410,682	-				-0.7
3,410,682	-				+0.1
3,410,682	-				-1.4
3,410,682	-				-0.3
3,410,716	+				+1.3
3,410,716	+				-1.2
3,410,716	+				-1.3
3,410,716	+				-1.3
3,410,716	+				+1.0
3,410,716	+				-0.1
3,410,717	-				+3.0
3,410,717	-				+1.0
3,410,732	+				+0.7
3,410,732	+				+1.5
3,410,732	+				-0.2
3,410,732	+				-0.3
3,410,732	+				+0.1
3,410,732	+				-2.2
3,410,732	+				-1.2
3,410,732	+				+0.5
3,410,732	+				+1.2
3,410,732	+				+0.1
3,410,732	+				-0.1
3,410,733	-				-1.5
3,410,733	-				+0.6
3,410,733	-				-2.0
3,410,733	-				-0.0
3,410,733	-				-1.1
3,410,733	-				-2.8
3,410,733	-				-0.3
3,410,754	+				-1.4
3,410,755	-				+0.6
3,410,770	+				-0.9
3,410,771	-				-0.7
3,410,771	-				-2.1
3,410,861	+				-2.2
3,410,861	+				-0.2
3,410,861	+				-0.4
3,410,862	-				-2.2
3,410,862	-				+0.6
3,410,862	-				-1.7
3,410,862	-				-1.4
3,410,862	-				+1.3
3,410,939	+				-1.9
3,410,940	-				+0.8
3,410,942	+				-0.5
3,410,942	+				-0.2
3,410,942	+				+1.3
3,410,942	+				+0.5
3,410,942	+				-0.0
3,410,942	+				+0.8
3,410,942	+				+1.7
3,410,942	+				+0.3
3,410,942	+				-0.6
3,410,942	+				-1.3
3,410,943	-				+0.4
3,410,943	-				+2.0
3,410,943	-				+2.2
3,410,943	-				-0.2
3,410,943	-				-1.0
3,410,943	-				-2.4
3,410,943	-				+0.8
3,410,943	-				+0.4
3,410,995	+				-0.1
3,410,996	-				+0.4
3,410,996	-				+3.8
3,411,065	+				-0.7
3,411,065	+				-1.0
3,411,065	+				-1.0
3,411,065	+				+0.1
3,411,065	+				-1.0
3,411,066	-				-0.1
3,411,066	-				+0.0
3,411,066	-				+1.6
3,411,066	-				-0.4
3,411,066	-				-0.0
3,411,066	-				+1.6
3,411,066	-				-1.9
3,411,066	-				-0.7
3,411,284	+		AO353_15435	0.22	-1.1
3,411,284	+		AO353_15435	0.22	+0.6
3,411,284	+		AO353_15435	0.22	-1.4
3,411,284	+		AO353_15435	0.22	-2.4
3,411,285	-		AO353_15435	0.22	-0.9
3,411,285	-		AO353_15435	0.22	+0.6
3,411,285	-		AO353_15435	0.22	+0.1
3,411,366	-		AO353_15435	0.27	-1.2
3,411,372	+		AO353_15435	0.28	+0.1
3,411,372	+		AO353_15435	0.28	-0.9
3,411,372	+		AO353_15435	0.28	-0.7
3,411,443	+		AO353_15435	0.32	+0.1
3,411,443	+		AO353_15435	0.32	-0.4
3,411,443	+		AO353_15435	0.32	-2.2
3,411,443	+		AO353_15435	0.32	+0.2
3,411,443	+		AO353_15435	0.32	+0.0
3,411,444	-		AO353_15435	0.32	-1.2
3,411,444	-		AO353_15435	0.32	-1.1
3,411,444	-		AO353_15435	0.32	-1.8
3,411,444	-		AO353_15435	0.32	-1.5
3,411,444	-		AO353_15435	0.32	-1.3
3,411,514	+		AO353_15435	0.37	-2.0
3,411,514	+		AO353_15435	0.37	+1.1
3,411,514	+		AO353_15435	0.37	+0.6
3,411,514	+		AO353_15435	0.37	+1.4
3,411,514	+		AO353_15435	0.37	-1.8
3,411,515	-		AO353_15435	0.37	+0.5
3,411,515	-		AO353_15435	0.37	-2.6
3,411,515	-		AO353_15435	0.37	+1.8
3,411,553	+		AO353_15435	0.39	-1.7
3,411,554	-		AO353_15435	0.39	+0.6
3,411,554	-		AO353_15435	0.39	+0.5
3,411,554	-		AO353_15435	0.39	+2.1
3,411,554	-		AO353_15435	0.39	+1.0