Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15310

Experiment: outer cut, LB soft agar motility assay

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_15300 and AO353_15305 overlap by 4 nucleotidesAO353_15305 and AO353_15310 overlap by 4 nucleotidesAO353_15310 and AO353_15315 overlap by 1 nucleotides AO353_15300: AO353_15300 - ribosomal RNA small subunit methyltransferase H, at 3,379,647 to 3,380,594 _15300 AO353_15305: AO353_15305 - cell division protein FtsL, at 3,380,591 to 3,380,884 _15305 AO353_15310: AO353_15310 - cell division protein, at 3,380,881 to 3,382,623 _15310 AO353_15315: AO353_15315 - UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase, at 3,382,623 to 3,384,086 _15315 Position (kb) 3380 3381 3382 3383Strain fitness (log2 ratio) -1 0 1at 3382.599 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction outer cut, LB soft agar motility assay
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3,382,599 + -0.2

Or see this region's nucleotide sequence