Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13790

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,063,484	+		AO353_13785	0.42	-0.5
3,063,485	-		AO353_13785	0.42	+1.0
3,063,485	-		AO353_13785	0.42	-3.0
3,063,485	-		AO353_13785	0.42	-0.7
3,063,487	+		AO353_13785	0.43	-0.8
3,063,487	+		AO353_13785	0.43	+0.6
3,063,487	+		AO353_13785	0.43	-1.6
3,063,488	-		AO353_13785	0.43	-1.7
3,063,488	-		AO353_13785	0.43	-1.1
3,063,488	-		AO353_13785	0.43	+2.0
3,063,488	-		AO353_13785	0.43	-1.7
3,063,628	+		AO353_13785	0.61	-1.0
3,063,628	+		AO353_13785	0.61	+0.5
3,063,642	+		AO353_13785	0.63	-0.4
3,063,643	-		AO353_13785	0.63	-1.7
3,063,643	-		AO353_13785	0.63	+0.5
3,063,643	-		AO353_13785	0.63	-0.2
3,063,772	+		AO353_13785	0.80	-2.0
3,063,773	-		AO353_13785	0.80	-1.1
3,063,773	-		AO353_13785	0.80	-0.8
3,063,773	-		AO353_13785	0.80	-0.7
3,063,820	+		AO353_13785	0.86	-0.0
3,063,820	+		AO353_13785	0.86	-0.8
3,063,820	+		AO353_13785	0.86	+2.3
3,063,820	+		AO353_13785	0.86	-2.1
3,063,820	+		AO353_13785	0.86	-1.0
3,063,820	+		AO353_13785	0.86	+1.4
3,063,820	+		AO353_13785	0.86	-1.4
3,063,820	+		AO353_13785	0.86	-1.8
3,063,820	+		AO353_13785	0.86	-0.3
3,063,820	+		AO353_13785	0.86	-1.2
3,063,820	+		AO353_13785	0.86	+0.5
3,063,820	+		AO353_13785	0.86	+4.4
3,063,820	+		AO353_13785	0.86	-2.0
3,063,820	+		AO353_13785	0.86	-0.7
3,063,820	+		AO353_13785	0.86	+0.1
3,063,820	+		AO353_13785	0.86	-0.8
3,063,821	-		AO353_13785	0.86	-0.3
3,063,821	-		AO353_13785	0.86	+0.5
3,063,821	-		AO353_13785	0.86	-0.7
3,063,821	-		AO353_13785	0.86	-1.0
3,063,821	-		AO353_13785	0.86	-1.0
3,063,821	-		AO353_13785	0.86	+0.7
3,063,821	-		AO353_13785	0.86	-1.1
3,063,821	-		AO353_13785	0.86	-2.0
3,063,849	+		AO353_13785	0.90	-2.3
3,063,849	+		AO353_13785	0.90	+0.2
3,063,849	+		AO353_13785	0.90	-0.5
3,063,849	+		AO353_13785	0.90	-0.9
3,063,849	+		AO353_13785	0.90	-1.6
3,063,849	+		AO353_13785	0.90	-0.7
3,063,849	+		AO353_13785	0.90	+0.1
3,063,849	+		AO353_13785	0.90	+1.1
3,063,849	+		AO353_13785	0.90	-0.5
3,063,849	+		AO353_13785	0.90	-0.0
3,063,849	+		AO353_13785	0.90	+0.4
3,063,850	-		AO353_13785	0.90	+0.5
3,063,850	-		AO353_13785	0.90	+1.9
3,063,850	-		AO353_13785	0.90	-2.5
3,063,850	-				+4.0
3,063,850	-		AO353_13785	0.90	-0.8
3,063,850	-		AO353_13785	0.90	+0.8
3,063,850	-		AO353_13785	0.90	+1.7
3,063,850	-		AO353_13785	0.90	-2.2
3,063,850	-		AO353_13785	0.90	+1.1
3,063,850	-		AO353_13785	0.90	+0.8
3,063,925	+				-0.7
3,063,925	+				-2.2
3,063,925	+				-0.9
3,063,925	+				-0.3
3,063,925	+				-0.5
3,063,925	+				+2.7
3,063,925	+				-0.7
3,063,937	+				-1.1
3,063,937	+				-1.3
3,063,937	+				-1.0
3,063,937	+				+2.3
3,063,937	+				+1.9
3,063,937	+				+1.4
3,063,937	+				+0.4
3,063,937	+				-0.4
3,063,937	+				-1.8
3,063,937	+				-1.0
3,063,937	+				-2.0
3,063,937	+				+1.9
3,063,937	+				-3.2
3,063,937	+				-0.9
3,063,937	+				+0.4
3,063,937	+				-0.1
3,063,937	+				-2.1
3,063,937	+				-0.1
3,063,937	+				+1.3
3,063,937	+				+0.5
3,063,937	+				+2.3
3,063,937	+				-0.9
3,063,938	-				-2.2
3,063,938	-				-0.4
3,063,938	-				-1.6
3,063,938	-				-1.2
3,063,938	-				+2.7
3,063,938	-				-1.6
3,063,941	+				+2.0
3,063,942	-				+1.2
3,063,942	-				-2.0
3,063,981	+				-2.2
3,064,031	+				+4.4
3,064,057	-				-0.0
3,064,057	-				+1.8
3,064,071	-				+0.8
3,064,071	-				+2.5
3,064,279	+				+1.2
3,064,279	+				+0.3
3,064,279	+				-1.9
3,064,279	+				-1.9
3,064,279	+				-0.3
3,064,280	-				-0.8
3,064,280	-				-0.8
3,064,280	-				+0.5
3,064,280	-				+2.7
3,064,298	+				-0.4
3,064,298	+				+0.3
3,064,299	-				-2.0
3,064,367	+				-0.5
3,064,367	+				-1.8
3,064,368	-				+1.8
3,064,368	-				-0.8
3,064,418	+				-0.5
3,064,418	+				+0.0
3,064,418	+				-0.2
3,064,418	+				-0.5
3,064,418	+				-0.5
3,064,419	-				-0.8
3,064,419	-				+0.7
3,064,419	-				+2.0
3,064,419	-				-1.8
3,064,419	-				+2.1
3,064,425	+				+4.9
3,064,425	+				+4.9
3,064,425	+				+2.3
3,064,425	+				+2.3
3,064,425	+				+2.3
3,064,425	+				+2.4
3,064,425	+				+3.9
3,064,425	+				+3.1
3,064,425	+				+4.4
3,064,425	+				+2.8
3,064,425	+				+1.4
3,064,425	+				+3.2
3,064,425	+				+4.3
3,064,425	+				+0.5
3,064,425	+				+2.1
3,064,425	+				+2.8
3,064,426	-				+3.4
3,064,426	-				-2.6
3,064,426	-				-2.1
3,064,426	-				-0.9
3,064,426	-				-0.2
3,064,426	-				+0.1
3,064,426	-				+2.1
3,064,426	-				-0.9
3,064,426	-				+0.3
3,064,426	-				-1.5
3,064,426	-				-0.1
3,064,426	-				-0.6
3,064,426	-				+0.4
3,064,426	-				-0.3
3,064,426	-				-0.1
3,064,427	+				+1.8
3,064,427	+				+4.0
3,064,438	+				+0.1
3,064,503	-		AO353_13790	0.13	+1.4
3,064,559	+		AO353_13790	0.27	-0.2
3,064,560	-				+0.8
3,064,743	+		AO353_13790	0.74	-0.9
3,064,743	+		AO353_13790	0.74	+1.7
3,064,744	-		AO353_13790	0.74	+2.6
3,064,747	+		AO353_13790	0.75	+3.6
3,064,747	+		AO353_13790	0.75	-0.9
3,064,747	+		AO353_13790	0.75	-2.9
3,064,747	+		AO353_13790	0.75	-0.2
3,064,747	+		AO353_13790	0.75	-1.1
3,064,747	+		AO353_13790	0.75	-3.3
3,064,748	-		AO353_13790	0.75	+1.6
3,064,748	-		AO353_13790	0.75	+4.1
3,064,748	-		AO353_13790	0.75	+0.1
3,064,748	-		AO353_13790	0.75	-1.2
3,064,748	-		AO353_13790	0.75	+1.5
3,064,748	-		AO353_13790	0.75	-1.7
3,064,748	-		AO353_13790	0.75	-1.2
3,064,748	-		AO353_13790	0.75	+1.7
3,064,782	+		AO353_13790	0.84	-3.0
3,064,783	-		AO353_13790	0.84	-1.2
3,064,783	-		AO353_13790	0.84	-0.9
3,064,783	-		AO353_13790	0.84	+1.5
3,064,783	-		AO353_13790	0.84	-0.4
3,064,783	-		AO353_13790	0.84	-1.2
3,064,801	+		AO353_13790	0.89	-0.7
3,064,801	+		AO353_13790	0.89	-1.3
3,064,826	+				+0.4
3,064,826	+				-0.7
3,064,826	+				+1.5
3,064,826	+				-0.9
3,064,826	+				+2.1
3,064,826	+				-2.3
3,064,826	+				-0.4
3,064,826	+				-3.0
3,064,826	+				-3.3
3,064,826	+				+0.2
3,064,827	-				-1.2
3,064,827	-				-1.9
3,064,827	-				-0.6
3,064,827	-				-0.1
3,064,827	-				+1.7
3,064,827	-				+1.1
3,064,827	-				-1.4
3,064,827	-				-2.0
3,064,827	-				-1.0
3,064,857	+				-0.5
3,064,858	-				-2.0
3,064,933	+				-1.7
3,064,934	-				-1.6
3,064,942	+				+1.6
3,064,942	+				+0.7
3,064,942	+				+0.5
3,064,942	+				-1.2
3,064,943	-				+0.1
3,064,983	-				-0.2
3,065,004	+				-1.4
3,065,018	-				+1.7
3,065,024	+				+0.9
3,065,024	+				-1.4
3,065,025	-				+0.1
3,065,062	+		AO353_13795	0.13	-1.2
3,065,062	+		AO353_13795	0.13	+0.2
3,065,062	+		AO353_13795	0.13	+0.2
3,065,063	-		AO353_13795	0.13	-0.7
3,065,063	-		AO353_13795	0.13	-1.0
3,065,095	+		AO353_13795	0.18	+2.7
3,065,096	-		AO353_13795	0.18	-1.7
3,065,096	-		AO353_13795	0.18	+0.6
3,065,096	-		AO353_13795	0.18	-1.1
3,065,150	-		AO353_13795	0.25	+1.8
3,065,177	+		AO353_13795	0.28	+1.7
3,065,177	+		AO353_13795	0.28	+0.3
3,065,177	+		AO353_13795	0.28	-0.8
3,065,178	-		AO353_13795	0.29	-1.6
3,065,178	-		AO353_13795	0.29	-0.2
3,065,219	+		AO353_13795	0.34	-1.2
3,065,220	-		AO353_13795	0.34	+1.1
3,065,220	-		AO353_13795	0.34	-1.3
3,065,220	-		AO353_13795	0.34	-0.5
3,065,270	+		AO353_13795	0.41	+1.3
3,065,271	-		AO353_13795	0.41	-1.0
3,065,271	-		AO353_13795	0.41	+2.1
3,065,271	-		AO353_13795	0.41	-1.7
3,065,330	+		AO353_13795	0.49	+0.3
3,065,330	+		AO353_13795	0.49	+1.9
3,065,331	-		AO353_13795	0.49	-1.1
3,065,361	+		AO353_13795	0.53	-0.7
3,065,361	+		AO353_13795	0.53	-1.2
3,065,361	+		AO353_13795	0.53	+1.3
3,065,361	+		AO353_13795	0.53	+0.1
3,065,362	-		AO353_13795	0.53	-0.0
3,065,362	-		AO353_13795	0.53	+2.9
3,065,377	-		AO353_13795	0.55	+0.5
3,065,378	+		AO353_13795	0.55	+0.4
3,065,378	+		AO353_13795	0.55	+0.5
3,065,379	-		AO353_13795	0.55	+0.6
3,065,432	-		AO353_13795	0.62	+0.6
3,065,458	+		AO353_13795	0.66	-2.0
3,065,459	-		AO353_13795	0.66	-1.5
3,065,464	+		AO353_13795	0.67	-1.3
3,065,493	+		AO353_13795	0.70	+1.1
3,065,494	-		AO353_13795	0.71	-1.2
3,065,494	-		AO353_13795	0.71	+0.5
3,065,549	-		AO353_13795	0.78	-1.9
3,065,549	-		AO353_13795	0.78	-0.1
3,065,549	-		AO353_13795	0.78	+1.1
3,065,557	+		AO353_13795	0.79	+0.6
3,065,558	-		AO353_13795	0.79	-1.3
3,065,558	-		AO353_13795	0.79	-1.2
3,065,558	-		AO353_13795	0.79	+2.1
3,065,590	+		AO353_13795	0.83	-0.2
3,065,674	+				-0.8
3,065,674	+				-0.9
3,065,675	-				+0.8