Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12325

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,712,655	+				-1.6
2,712,655	+				+3.8
2,712,655	+				-1.2
2,712,655	+				-0.9
2,712,655	+				+1.2
2,712,655	+				-0.7
2,712,656	-				+2.2
2,712,656	-				+1.9
2,712,656	-				-0.2
2,712,656	-				+0.1
2,712,656	-				+0.1
2,712,656	-				+0.2
2,712,656	-				-1.0
2,712,772	+		AO353_12320	0.16	-1.5
2,712,772	+		AO353_12320	0.16	+0.5
2,712,772	+		AO353_12320	0.16	-0.1
2,712,772	+		AO353_12320	0.16	+1.1
2,712,772	+		AO353_12320	0.16	+0.4
2,712,773	-		AO353_12320	0.16	+0.6
2,712,773	-		AO353_12320	0.16	-1.3
2,712,773	-		AO353_12320	0.16	+1.2
2,712,773	-		AO353_12320	0.16	+0.9
2,712,773	-		AO353_12320	0.16	+0.4
2,712,773	-		AO353_12320	0.16	-3.5
2,712,773	-		AO353_12320	0.16	-0.9
2,712,773	-		AO353_12320	0.16	-1.1
2,712,887	-		AO353_12320	0.30	+0.1
2,712,887	-		AO353_12320	0.30	+1.7
2,713,051	+		AO353_12320	0.51	-0.9
2,713,051	+		AO353_12320	0.51	+1.2
2,713,052	-		AO353_12320	0.51	+2.6
2,713,052	-		AO353_12320	0.51	-1.6
2,713,052	-		AO353_12320	0.51	+0.4
2,713,052	-		AO353_12320	0.51	+2.4
2,713,052	-		AO353_12320	0.51	-1.9
2,713,052	-		AO353_12320	0.51	-2.0
2,713,075	+		AO353_12320	0.54	+0.5
2,713,076	-		AO353_12320	0.54	+0.1
2,713,144	+		AO353_12320	0.62	-1.4
2,713,144	+		AO353_12320	0.62	-1.3
2,713,144	+		AO353_12320	0.62	-2.1
2,713,144	+		AO353_12320	0.62	+0.6
2,713,144	+		AO353_12320	0.62	+0.6
2,713,144	+		AO353_12320	0.62	-3.4
2,713,144	+		AO353_12320	0.62	+2.5
2,713,145	-		AO353_12320	0.63	+2.5
2,713,213	+		AO353_12320	0.71	+1.0
2,713,213	+				+1.6
2,713,214	-		AO353_12320	0.71	+0.1
2,713,214	-		AO353_12320	0.71	+0.6
2,713,214	-		AO353_12320	0.71	+0.9
2,713,225	+		AO353_12320	0.73	-0.1
2,713,226	-		AO353_12320	0.73	+0.4
2,713,226	-		AO353_12320	0.73	-1.7
2,713,226	-		AO353_12320	0.73	-0.4
2,713,226	-		AO353_12320	0.73	+1.1
2,713,226	-		AO353_12320	0.73	+1.4
2,713,291	+		AO353_12320	0.81	+0.4
2,713,291	+		AO353_12320	0.81	-0.9
2,713,291	+		AO353_12320	0.81	-0.7
2,713,291	+		AO353_12320	0.81	+0.4
2,713,291	+		AO353_12320	0.81	-0.6
2,713,292	-		AO353_12320	0.81	-0.2
2,713,292	-		AO353_12320	0.81	+0.6
2,713,328	-		AO353_12320	0.85	-0.2
2,713,384	+				-0.6
2,713,384	+				+1.0
2,713,384	+				-1.1
2,713,384	+				+2.5
2,713,385	-				-0.8
2,713,385	-				+0.3
2,713,385	-				-0.1
2,713,385	-				+0.1
2,713,385	-				-0.4
2,713,509	+				-2.1
2,713,519	+				-1.1
2,713,519	+				-2.1
2,713,519	+				-0.8
2,713,714	+				-1.3
2,713,714	+				-1.6
2,713,714	+				+0.8
2,713,714	+				-0.8
2,713,715	-				-1.5
2,713,715	-				+0.6
2,713,715	-				-0.3
2,713,715	-				+0.1
2,713,715	-				-0.1
2,713,738	+		AO353_12325	0.10	-1.6
2,713,738	+		AO353_12325	0.10	-0.5
2,713,739	-		AO353_12325	0.10	+0.2
2,713,739	-		AO353_12325	0.10	+1.7
2,713,739	-		AO353_12325	0.10	+0.6
2,713,739	-		AO353_12325	0.10	+0.7
2,713,739	-		AO353_12325	0.10	-0.8
2,713,768	+		AO353_12325	0.13	-0.0
2,713,768	+		AO353_12325	0.13	-1.1
2,713,768	+		AO353_12325	0.13	-0.5
2,713,769	-		AO353_12325	0.14	-0.6
2,713,769	-		AO353_12325	0.14	-0.2
2,713,962	-		AO353_12325	0.34	-0.2
2,713,962	-		AO353_12325	0.34	-0.9
2,714,116	+		AO353_12325	0.50	-2.4
2,714,116	+		AO353_12325	0.50	+0.1
2,714,116	+		AO353_12325	0.50	-0.8
2,714,117	-		AO353_12325	0.50	+0.2
2,714,156	+		AO353_12325	0.54	-1.1
2,714,156	+		AO353_12325	0.54	-1.0
2,714,156	+		AO353_12325	0.54	-0.6
2,714,156	+		AO353_12325	0.54	-1.2
2,714,156	+		AO353_12325	0.54	+0.1
2,714,156	+		AO353_12325	0.54	-1.7
2,714,156	+		AO353_12325	0.54	-0.9
2,714,157	-		AO353_12325	0.54	-1.0
2,714,157	-		AO353_12325	0.54	+0.6
2,714,157	-		AO353_12325	0.54	+0.4
2,714,157	-		AO353_12325	0.54	-0.7
2,714,157	-		AO353_12325	0.54	-0.5
2,714,157	-		AO353_12325	0.54	-0.3
2,714,167	+		AO353_12325	0.55	+0.1
2,714,167	+		AO353_12325	0.55	+0.2
2,714,168	-		AO353_12325	0.55	-0.3
2,714,168	-		AO353_12325	0.55	-1.3
2,714,168	-		AO353_12325	0.55	+1.7
2,714,168	-		AO353_12325	0.55	+0.4
2,714,168	-		AO353_12325	0.55	-0.7
2,714,168	-		AO353_12325	0.55	-0.2
2,714,245	+		AO353_12325	0.63	-0.3
2,714,245	+		AO353_12325	0.63	-1.8
2,714,245	+		AO353_12325	0.63	-0.2
2,714,245	+		AO353_12325	0.63	-0.1
2,714,245	+		AO353_12325	0.63	+0.1
2,714,245	+		AO353_12325	0.63	-1.5
2,714,245	+		AO353_12325	0.63	+0.9
2,714,245	+		AO353_12325	0.63	-2.3
2,714,245	+		AO353_12325	0.63	+0.9
2,714,245	+		AO353_12325	0.63	+2.0
2,714,245	+		AO353_12325	0.63	+1.8
2,714,245	+		AO353_12325	0.63	+0.9
2,714,245	+		AO353_12325	0.63	-1.6
2,714,246	-		AO353_12325	0.63	+1.1
2,714,246	-		AO353_12325	0.63	+1.1
2,714,246	-		AO353_12325	0.63	-0.9
2,714,246	-		AO353_12325	0.63	+1.2
2,714,246	-		AO353_12325	0.63	-1.2
2,714,246	-		AO353_12325	0.63	+0.7
2,714,246	-		AO353_12325	0.63	+1.1
2,714,246	-		AO353_12325	0.63	-0.7
2,714,246	-		AO353_12325	0.63	-0.2
2,714,246	-		AO353_12325	0.63	+0.9
2,714,246	-		AO353_12325	0.63	-0.9
2,714,246	-		AO353_12325	0.63	-0.6
2,714,246	-		AO353_12325	0.63	+0.3
2,714,527	+				-1.5
2,714,527	+				-0.7
2,714,527	+				-0.6
2,714,528	-				+3.0
2,714,528	-				+1.4
2,714,528	-				-1.9
2,714,528	-				+1.1
2,715,067	+		AO353_12330	0.65	-1.9
2,715,067	+		AO353_12330	0.65	+0.5
2,715,067	+		AO353_12330	0.65	+0.1
2,715,068	-		AO353_12330	0.65	-2.3
2,715,068	-		AO353_12330	0.65	+0.0
2,715,068	-		AO353_12330	0.65	+0.1
2,715,073	+		AO353_12330	0.66	+1.2
2,715,073	+		AO353_12330	0.66	-1.3
2,715,073	+		AO353_12330	0.66	-1.5
2,715,073	+		AO353_12330	0.66	+0.6
2,715,073	+		AO353_12330	0.66	+0.2
2,715,073	+		AO353_12330	0.66	+0.2
2,715,073	+		AO353_12330	0.66	+0.8
2,715,073	+		AO353_12330	0.66	+0.4
2,715,074	-		AO353_12330	0.66	-2.9
2,715,074	-		AO353_12330	0.66	-1.5
2,715,074	-		AO353_12330	0.66	-0.0
2,715,074	-		AO353_12330	0.66	-1.2
2,715,074	-		AO353_12330	0.66	+0.1
2,715,074	-		AO353_12330	0.66	+1.4
2,715,074	-		AO353_12330	0.66	-1.0
2,715,074	-		AO353_12330	0.66	-0.6
2,715,074	-		AO353_12330	0.66	-2.0
2,715,323	+				+2.6
2,715,324	-				-1.2
2,715,369	+				-2.7
2,715,369	+				+1.9
2,715,377	+				-0.3
2,715,377	+				-0.3
2,715,377	+				-1.7
2,715,377	+				-1.7
2,715,377	+				-0.0
2,715,377	+				+0.0
2,715,377	+				-0.9
2,715,378	+				+1.4
2,715,378	-				+1.8
2,715,378	-				+0.2
2,715,378	-				+0.4
2,715,378	-				-1.0
2,715,378	-				+0.4
2,715,378	-				+0.7
2,715,378	-				-2.4
2,715,414	+				+2.2
2,715,414	+				+0.7
2,715,414	+				+0.6
2,715,414	+				+1.8
2,715,415	-				-0.2
2,715,467	+				+1.0
2,715,467	+				+1.3
2,715,467	+				-1.6