Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11810

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,604,465	+		AO353_11805	0.34	+2.1
2,604,466	-		AO353_11805	0.34	+1.8
2,604,493	+		AO353_11805	0.36	-0.8
2,604,493	+		AO353_11805	0.36	-0.7
2,604,493	+		AO353_11805	0.36	-0.4
2,604,493	+		AO353_11805	0.36	+1.6
2,604,494	-		AO353_11805	0.36	-0.6
2,604,522	-		AO353_11805	0.39	-1.0
2,604,535	+		AO353_11805	0.40	+0.1
2,604,535	+		AO353_11805	0.40	+0.1
2,604,535	+		AO353_11805	0.40	-0.1
2,604,535	+		AO353_11805	0.40	+0.0
2,604,535	+		AO353_11805	0.40	+1.5
2,604,536	-		AO353_11805	0.40	-1.7
2,604,536	-		AO353_11805	0.40	-0.4
2,604,536	-		AO353_11805	0.40	+2.0
2,604,536	-		AO353_11805	0.40	-0.8
2,604,536	-		AO353_11805	0.40	+0.3
2,604,536	-		AO353_11805	0.40	-1.6
2,604,536	-		AO353_11805	0.40	-3.1
2,604,536	-		AO353_11805	0.40	+1.7
2,604,805	+		AO353_11805	0.64	-1.8
2,604,925	+		AO353_11805	0.74	-0.7
2,604,925	+		AO353_11805	0.74	+0.5
2,604,925	+		AO353_11805	0.74	-1.6
2,604,926	-		AO353_11805	0.74	+2.0
2,604,926	-		AO353_11805	0.74	+1.7
2,604,949	+		AO353_11805	0.76	-0.5
2,604,950	-		AO353_11805	0.76	-0.1
2,604,950	-		AO353_11805	0.76	-1.5
2,605,091	+		AO353_11805	0.89	-0.7
2,605,091	+		AO353_11805	0.89	+0.7
2,605,091	+		AO353_11805	0.89	-1.7
2,605,092	-		AO353_11805	0.89	+1.5
2,605,213	+				-1.3
2,605,213	+				-0.7
2,605,213	+				+1.9
2,605,213	+				-1.1
2,605,213	+				-1.6
2,605,214	-				+0.1
2,605,232	+				+0.1
2,605,232	+				+0.1
2,605,233	-				+2.4
2,605,233	-				-3.0
2,605,233	-				-0.3
2,605,290	+				+0.3
2,605,290	+				-0.6
2,605,290	+				-1.5
2,605,290	+				+0.9
2,605,291	-				+0.6
2,605,291	-				-1.8
2,605,291	-				-0.3
2,605,291	-				-1.1
2,605,347	+				+0.5
2,605,386	+				-1.0
2,605,386	+				-1.4
2,605,386	+				+1.6
2,605,386	+				-0.3
2,605,386	+				-1.5
2,605,386	+				-1.0
2,605,387	-				+1.1
2,605,387	-				-0.1
2,605,387	-				-2.1
2,605,387	-				+1.2
2,605,387	-				-1.2
2,605,387	-				-0.9
2,605,387	-				-0.5
2,605,387	-				-1.4
2,605,387	-				+0.9
2,605,417	+				-1.0
2,605,519	+				+3.7
2,605,520	-				-2.0
2,605,520	-				-1.4
2,605,520	-				+1.4
2,605,520	-				+0.7
2,605,520	-				-0.3
2,605,800	+		AO353_11810	0.21	+1.1
2,605,801	-		AO353_11810	0.21	+1.1
2,605,801	-		AO353_11810	0.21	-0.3
2,605,801	-		AO353_11810	0.21	+0.8
2,605,801	-		AO353_11810	0.21	-2.6
2,605,801	-		AO353_11810	0.21	-0.9
2,605,834	+		AO353_11810	0.23	+1.7
2,605,835	-		AO353_11810	0.23	+1.3
2,605,835	-		AO353_11810	0.23	-1.6
2,605,852	+		AO353_11810	0.24	+0.9
2,605,886	+		AO353_11810	0.26	-0.1
2,605,886	+		AO353_11810	0.26	-2.7
2,605,887	-		AO353_11810	0.26	-0.0
2,605,887	-		AO353_11810	0.26	-0.6
2,606,080	+		AO353_11810	0.36	+1.0
2,606,080	+		AO353_11810	0.36	+0.3
2,606,081	-		AO353_11810	0.36	-1.9
2,606,081	-		AO353_11810	0.36	-2.0
2,606,081	-		AO353_11810	0.36	+1.8
2,606,081	-		AO353_11810	0.36	+1.0
2,606,081	-		AO353_11810	0.36	-0.9
2,606,152	+		AO353_11810	0.40	-0.1
2,606,152	+		AO353_11810	0.40	+0.0
2,606,153	-		AO353_11810	0.40	-1.0
2,606,153	-		AO353_11810	0.40	+1.8
2,606,153	-		AO353_11810	0.40	+1.1
2,606,314	+		AO353_11810	0.48	+0.0
2,606,314	+		AO353_11810	0.48	-1.1
2,606,315	-		AO353_11810	0.48	+1.2
2,606,315	-		AO353_11810	0.48	-0.4
2,606,315	-		AO353_11810	0.48	-0.1
2,606,315	-		AO353_11810	0.48	-0.2
2,606,413	+		AO353_11810	0.53	+2.5
2,606,413	+		AO353_11810	0.53	+1.5
2,606,414	-		AO353_11810	0.53	-1.1
2,606,414	-		AO353_11810	0.53	+1.4
2,606,414	-		AO353_11810	0.53	+1.4
2,606,526	+		AO353_11810	0.59	+0.3
2,606,599	+		AO353_11810	0.63	-0.2
2,606,599	+		AO353_11810	0.63	-1.0
2,606,746	+		AO353_11810	0.70	+0.4
2,606,746	+		AO353_11810	0.70	-0.3
2,606,747	-		AO353_11810	0.70	+0.7
2,606,747	-		AO353_11810	0.70	+2.5
2,606,794	+		AO353_11810	0.73	-0.7
2,606,794	+		AO353_11810	0.73	-0.9
2,606,794	+		AO353_11810	0.73	+1.1
2,606,794	+		AO353_11810	0.73	+0.4
2,606,794	+		AO353_11810	0.73	-0.9
2,606,795	-		AO353_11810	0.73	+0.3
2,606,848	+		AO353_11810	0.76	+0.8
2,606,849	-		AO353_11810	0.76	-0.2
2,606,849	-		AO353_11810	0.76	+0.5
2,606,905	+		AO353_11810	0.78	+1.9
2,606,905	+		AO353_11810	0.78	-1.7
2,606,905	+		AO353_11810	0.78	+0.7
2,606,906	-		AO353_11810	0.79	-1.0
2,606,906	-		AO353_11810	0.79	-1.2
2,606,906	-		AO353_11810	0.79	+3.0
2,606,906	-		AO353_11810	0.79	-1.4
2,607,001	+		AO353_11810	0.83	-1.5
2,607,001	+		AO353_11810	0.83	+0.9
2,607,001	+		AO353_11810	0.83	+1.7
2,607,001	+		AO353_11810	0.83	-0.1
2,607,001	+		AO353_11810	0.83	+0.0
2,607,002	-		AO353_11810	0.83	+0.5
2,607,105	+		AO353_11810	0.89	+1.9
2,607,154	+				+0.2
2,607,154	+				-0.6
2,607,154	+				-0.2
2,607,154	+				+0.4
2,607,154	+				-1.3
2,607,154	+				+0.8
2,607,154	+				-2.2
2,607,155	-				-0.8
2,607,155	-				+1.2
2,607,155	-				-1.4
2,607,155	-				+2.1
2,607,155	-				-1.6
2,607,168	-				+0.6
2,607,168	-				-0.3
2,607,222	+				-2.3
2,607,223	-				-1.1
2,607,277	+				-0.2
2,607,287	+				-0.4
2,607,335	+				-0.1
2,607,335	+				+5.1
2,607,335	+				-2.1
2,607,335	+				-1.0
2,607,335	+				-0.7
2,607,335	+				-0.4
2,607,336	-				-0.3
2,607,336	-				+0.4
2,607,336	-				-2.1
2,607,336	-				+0.3
2,607,362	+				-0.4
2,607,362	+				-0.4
2,607,474	+		AO353_11815	0.18	-2.0
2,607,474	+		AO353_11815	0.18	+1.3
2,607,474	+		AO353_11815	0.18	+4.4
2,607,475	-		AO353_11815	0.18	-2.1
2,607,488	+		AO353_11815	0.21	-0.5
2,607,489	-		AO353_11815	0.22	+0.7
2,607,489	-		AO353_11815	0.22	+2.8
2,607,498	+		AO353_11815	0.24	-1.7
2,607,498	+		AO353_11815	0.24	+0.3
2,607,498	+		AO353_11815	0.24	-1.3
2,607,498	+		AO353_11815	0.24	-1.7
2,607,498	+		AO353_11815	0.24	-0.8
2,607,498	+		AO353_11815	0.24	+1.8
2,607,498	+		AO353_11815	0.24	-0.4
2,607,498	+		AO353_11815	0.24	+0.2
2,607,499	-		AO353_11815	0.24	+1.3
2,607,499	-		AO353_11815	0.24	+0.5
2,607,499	-		AO353_11815	0.24	-1.0
2,607,499	-		AO353_11815	0.24	+1.0
2,607,499	-		AO353_11815	0.24	+0.6
2,607,499	-		AO353_11815	0.24	-2.2
2,607,499	-		AO353_11815	0.24	-1.9
2,607,499	-		AO353_11815	0.24	-1.4
2,607,499	-		AO353_11815	0.24	-0.7
2,607,499	-		AO353_11815	0.24	-0.0
2,607,499	-		AO353_11815	0.24	+1.1
2,607,499	-		AO353_11815	0.24	-0.9
2,607,499	-		AO353_11815	0.24	+3.1
2,607,501	+		AO353_11815	0.24	+0.3
2,607,501	+		AO353_11815	0.24	-1.3
2,607,502	-		AO353_11815	0.25	+0.1
2,607,527	+		AO353_11815	0.30	-2.2
2,607,527	+		AO353_11815	0.30	+2.3
2,607,527	+		AO353_11815	0.30	+1.5
2,607,527	+		AO353_11815	0.30	-1.1
2,607,527	+		AO353_11815	0.30	+2.2
2,607,527	+		AO353_11815	0.30	+0.1
2,607,528	-		AO353_11815	0.31	+0.4
2,607,528	-		AO353_11815	0.31	+1.0
2,607,528	-		AO353_11815	0.31	+3.3
2,607,528	-		AO353_11815	0.31	-1.2
2,607,528	-		AO353_11815	0.31	-2.2
2,607,528	-		AO353_11815	0.31	-0.7
2,607,528	-		AO353_11815	0.31	-1.8
2,607,528	-		AO353_11815	0.31	-0.8
2,607,528	-		AO353_11815	0.31	+1.9
2,607,528	-		AO353_11815	0.31	-2.3
2,607,528	-		AO353_11815	0.31	+0.1
2,607,528	-		AO353_11815	0.31	-1.7
2,607,528	-		AO353_11815	0.31	-1.2
2,607,528	-		AO353_11815	0.31	-1.1
2,607,528	-		AO353_11815	0.31	+0.4
2,607,531	+		AO353_11815	0.31	-0.7
2,607,531	+		AO353_11815	0.31	-0.6
2,607,531	+		AO353_11815	0.31	-0.9
2,607,531	+		AO353_11815	0.31	+0.7
2,607,531	+		AO353_11815	0.31	-0.2
2,607,531	+		AO353_11815	0.31	-0.4
2,607,531	+		AO353_11815	0.31	-0.9
2,607,531	+		AO353_11815	0.31	-0.8
2,607,531	+		AO353_11815	0.31	-2.1
2,607,532	-		AO353_11815	0.31	-1.6
2,607,532	-		AO353_11815	0.31	-1.0
2,607,532	-		AO353_11815	0.31	-0.7
2,607,532	-		AO353_11815	0.31	-0.7
2,607,532	-		AO353_11815	0.31	-0.3
2,607,532	-		AO353_11815	0.31	+1.7
2,607,532	-		AO353_11815	0.31	-0.3
2,607,532	-		AO353_11815	0.31	+0.8
2,607,532	-		AO353_11815	0.31	-2.2
2,607,532	-		AO353_11815	0.31	+0.1
2,607,532	-		AO353_11815	0.31	+1.7
2,607,606	+		AO353_11815	0.49	+0.8
2,607,606	+		AO353_11815	0.49	-1.4
2,607,606	+		AO353_11815	0.49	-0.7
2,607,607	-		AO353_11815	0.49	-0.3
2,607,607	-		AO353_11815	0.49	-1.9
2,607,607	-		AO353_11815	0.49	+4.4
2,607,607	-		AO353_11815	0.49	+0.1
2,607,684	+		AO353_11815	0.67	-0.1
2,607,684	+		AO353_11815	0.67	+0.3
2,607,797	-				-1.6
2,607,891	+				+1.2
2,607,892	-				+1.0
2,607,903	+				+0.7
2,607,903	+				+0.5
2,607,903	+				+0.8
2,607,906	+				-0.6
2,607,963	+		AO353_11820	0.14	+3.7
2,607,963	+		AO353_11820	0.14	-1.2
2,607,964	-		AO353_11820	0.15	-0.1
2,607,964	-		AO353_11820	0.15	-1.4
2,607,964	-		AO353_11820	0.15	+1.5
2,607,973	-		AO353_11820	0.16	-0.7
2,608,017	+		AO353_11820	0.26	-2.2
2,608,017	+		AO353_11820	0.26	+0.3
2,608,017	+		AO353_11820	0.26	-0.8
2,608,017	+		AO353_11820	0.26	+2.8
2,608,017	+		AO353_11820	0.26	+1.5
2,608,018	-		AO353_11820	0.26	-0.4
2,608,018	-		AO353_11820	0.26	+1.4
2,608,018	-		AO353_11820	0.26	+1.8
2,608,018	-		AO353_11820	0.26	-0.1
2,608,018	-		AO353_11820	0.26	-1.3
2,608,033	+		AO353_11820	0.29	-0.6
2,608,034	-		AO353_11820	0.29	-0.1
2,608,187	+		AO353_11820	0.60	+1.8
2,608,187	+		AO353_11820	0.60	-2.9
2,608,187	+		AO353_11820	0.60	-1.9
2,608,188	-		AO353_11820	0.61	-1.5
2,608,195	+		AO353_11820	0.62	+0.2
2,608,274	+		AO353_11820	0.78	-1.3
2,608,274	+		AO353_11820	0.78	+1.9
2,608,274	+		AO353_11820	0.78	-0.8
2,608,275	-		AO353_11820	0.79	+1.7
2,608,275	-		AO353_11820	0.79	-0.1
2,608,275	-		AO353_11820	0.79	-0.8
2,608,275	-		AO353_11820	0.79	-0.6