Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10755

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,351,756	+		AO353_10740	0.85	+0.1
2,351,756	+		AO353_10740	0.85	+1.5
2,351,756	+		AO353_10740	0.85	+0.8
2,351,756	+		AO353_10740	0.85	+2.2
2,351,756	+		AO353_10740	0.85	-1.3
2,351,756	+		AO353_10740	0.85	+1.1
2,351,756	+		AO353_10740	0.85	-0.2
2,351,756	+		AO353_10740	0.85	-1.6
2,351,757	-		AO353_10740	0.85	-0.1
2,351,757	-		AO353_10740	0.85	+0.2
2,351,757	-		AO353_10740	0.85	-2.1
2,351,757	-		AO353_10740	0.85	-1.0
2,351,757	-		AO353_10740	0.85	+2.7
2,351,757	-		AO353_10740	0.85	+0.6
2,351,757	-		AO353_10740	0.85	-0.3
2,351,757	-		AO353_10740	0.85	-0.9
2,351,787	+				+1.7
2,351,787	+				+0.6
2,351,788	-				+1.8
2,351,788	-				-0.8
2,351,788	-				-0.7
2,351,833	-				-1.0
2,351,833	-				-0.5
2,351,833	-				+1.4
2,351,854	+				-1.2
2,351,854	+				-0.1
2,351,854	+				+0.9
2,351,855	-				-2.4
2,351,855	-				-0.2
2,351,855	-				+1.4
2,351,891	+				+0.7
2,351,891	+				-0.1
2,351,891	+				-0.6
2,351,891	+				-1.1
2,351,891	+				+1.3
2,351,892	-				+0.8
2,351,892	-				-1.8
2,351,892	-				-2.2
2,351,892	-				+0.2
2,352,061	+		AO353_10745	0.48	+1.5
2,352,066	+		AO353_10745	0.50	+1.7
2,352,066	+		AO353_10745	0.50	-2.0
2,352,066	+		AO353_10745	0.50	-0.9
2,352,066	+		AO353_10745	0.50	-2.8
2,352,066	+		AO353_10745	0.50	-0.5
2,352,067	-		AO353_10745	0.51	-0.7
2,352,067	-		AO353_10745	0.51	-1.8
2,352,067	-		AO353_10745	0.51	-0.5
2,352,067	-		AO353_10745	0.51	+0.7
2,352,067	-		AO353_10745	0.51	-1.3
2,352,074	+		AO353_10745	0.54	-0.8
2,352,074	+		AO353_10745	0.54	-2.0
2,352,075	-		AO353_10745	0.54	+1.4
2,352,075	-		AO353_10745	0.54	-0.8
2,352,161	+				+1.7
2,352,161	+				-1.0
2,352,162	-				-1.3
2,352,162	-				-0.8
2,352,179	+				+0.6
2,352,179	+				-1.4
2,352,179	+				+0.2
2,352,179	+				-1.0
2,352,179	+				+1.1
2,352,180	-				-1.7
2,352,180	-				+2.1
2,352,180	-				-0.4
2,352,189	+				+1.6
2,352,241	+		AO353_10750	0.13	-1.9
2,352,243	+		AO353_10750	0.13	+0.0
2,352,243	+		AO353_10750	0.13	+1.3
2,352,243	+		AO353_10750	0.13	+1.7
2,352,243	+		AO353_10750	0.13	-0.4
2,352,243	+		AO353_10750	0.13	-0.5
2,352,243	+		AO353_10750	0.13	-1.1
2,352,244	-		AO353_10750	0.13	-1.3
2,352,244	-		AO353_10750	0.13	-0.5
2,352,244	-		AO353_10750	0.13	+2.5
2,352,244	-		AO353_10750	0.13	-0.2
2,352,244	-		AO353_10750	0.13	-1.3
2,352,244	-		AO353_10750	0.13	-0.1
2,352,291	+		AO353_10750	0.25	+1.8
2,352,291	+		AO353_10750	0.25	+0.3
2,352,333	+		AO353_10750	0.35	-0.9
2,352,333	+		AO353_10750	0.35	+1.1
2,352,333	+		AO353_10750	0.35	-1.1
2,352,334	-		AO353_10750	0.35	-1.5
2,352,334	-		AO353_10750	0.35	+3.3
2,352,334	-		AO353_10750	0.35	+0.4
2,352,334	-		AO353_10750	0.35	+0.1
2,352,334	-		AO353_10750	0.35	-0.3
2,352,334	-		AO353_10750	0.35	+2.6
2,352,334	-		AO353_10750	0.35	-1.5
2,352,378	+		AO353_10750	0.45	-0.5
2,352,378	+		AO353_10750	0.45	-0.1
2,352,378	+		AO353_10750	0.45	-0.8
2,352,379	-		AO353_10750	0.45	-0.6
2,352,379	-		AO353_10750	0.45	+2.2
2,352,379	-		AO353_10750	0.45	+1.0
2,352,460	+		AO353_10750	0.65	-0.2
2,352,460	+		AO353_10750	0.65	+0.2
2,352,460	+		AO353_10750	0.65	-0.1
2,352,461	-		AO353_10750	0.65	-1.2
2,352,461	-		AO353_10750	0.65	-0.9
2,352,461	-		AO353_10750	0.65	-0.2
2,352,597	+				-1.1
2,352,597	+				+1.1
2,352,597	+				+0.7
2,352,597	+				+1.6
2,352,598	-				-1.0
2,352,598	-				-0.3
2,352,598	-				+1.4
2,352,598	-				+1.1
2,352,598	-				+0.8
2,352,630	+				-0.7
2,352,630	+				-0.9
2,352,631	-				+1.8
2,352,631	-				+0.1
2,352,633	+				-0.1
2,352,633	+				+0.5
2,352,633	+				-1.0
2,352,633	+				-1.4
2,352,633	+				+1.6
2,352,633	+				-0.9
2,352,634	-				+1.4
2,352,634	-				+1.3
2,352,634	-				+0.2
2,352,634	-				-1.8
2,352,634	-				+1.0
2,352,634	-				+0.4
2,352,634	-				+0.6
2,352,634	-				-2.8
2,352,634	-				+0.7
2,352,634	-				+1.2
2,352,639	+				+0.6
2,352,639	+				-1.6
2,352,640	-				-0.9
2,352,706	+		AO353_10755	0.14	-1.1
2,352,706	+		AO353_10755	0.14	+0.6
2,352,707	-		AO353_10755	0.14	+2.7
2,352,707	-		AO353_10755	0.14	+0.5
2,352,707	-		AO353_10755	0.14	+0.4
2,352,792	+		AO353_10755	0.35	+0.6
2,352,792	+		AO353_10755	0.35	-0.9
2,352,793	-		AO353_10755	0.35	-0.4
2,352,793	-		AO353_10755	0.35	-1.6
2,352,811	-		AO353_10755	0.39	-1.9
2,352,902	-		AO353_10755	0.61	-1.1
2,352,902	-		AO353_10755	0.61	+3.2
2,352,902	-		AO353_10755	0.61	+0.1
2,352,902	-		AO353_10755	0.61	+0.4
2,352,902	-		AO353_10755	0.61	+0.3
2,352,902	-		AO353_10755	0.61	+0.2
2,352,902	-		AO353_10755	0.61	-0.9
2,352,902	-		AO353_10755	0.61	+0.4
2,352,902	-		AO353_10755	0.61	-1.7
2,353,053	+				-2.5
2,353,064	+				-1.7
2,353,065	-				+1.9
2,353,088	+				-0.1
2,353,088	+				-0.4
2,353,088	+				+0.6
2,353,088	+				-1.8
2,353,089	-				-0.5
2,353,089	-				+1.1
2,353,089	-				+4.1
2,353,089	-				-0.1
2,353,152	+				+0.4
2,353,152	+				-1.2
2,353,152	+				+2.4
2,353,152	+				+0.4
2,353,226	+				+0.8
2,353,226	+				+0.5
2,353,226	+				-1.7
2,353,226	+				+0.6
2,353,226	+				+2.1
2,353,226	+				-1.2
2,353,226	+				-1.9
2,353,226	+				-1.7
2,353,226	+				-1.5
2,353,227	-				-1.7
2,353,227	-				+0.2
2,353,227	-				-0.7
2,353,227	-				-0.4
2,353,227	-				-0.3
2,353,227	-				+1.4
2,353,227	-				-0.7
2,353,227	-				+0.2
2,353,227	-				-2.3
2,353,227	-				-0.7
2,353,227	-				+0.8
2,353,227	-				+0.1
2,353,227	-				+3.1
2,353,227	-				+0.8
2,353,227	-				-0.4
2,353,229	+				+2.0
2,353,229	+				+0.4
2,353,229	+				-1.6
2,353,229	+				-0.6
2,353,229	+				-1.5
2,353,230	-				+1.0
2,353,230	-				-0.1
2,353,230	-				-0.4
2,353,407	-		AO353_10760	0.26	+2.8
2,353,427	+		AO353_10760	0.28	-0.8
2,353,427	+		AO353_10760	0.28	-1.1
2,353,427	+		AO353_10760	0.28	+0.6
2,353,427	+		AO353_10760	0.28	+0.2
2,353,427	+		AO353_10760	0.28	+1.7
2,353,427	+		AO353_10760	0.28	+0.2
2,353,427	+		AO353_10760	0.28	+0.1
2,353,427	+		AO353_10760	0.28	+0.3
2,353,427	+		AO353_10760	0.28	-1.2
2,353,427	+		AO353_10760	0.28	-1.1
2,353,427	+		AO353_10760	0.28	+0.2
2,353,427	+		AO353_10760	0.28	+1.7
2,353,427	+		AO353_10760	0.28	+0.1
2,353,427	+		AO353_10760	0.28	-0.1
2,353,427	+		AO353_10760	0.28	-0.4
2,353,427	+		AO353_10760	0.28	-0.1
2,353,427	+		AO353_10760	0.28	+2.1
2,353,427	+		AO353_10760	0.28	-1.6
2,353,427	+		AO353_10760	0.28	-2.5
2,353,427	+		AO353_10760	0.28	+0.2
2,353,428	-		AO353_10760	0.28	-0.3
2,353,428	-		AO353_10760	0.28	-1.5
2,353,428	-		AO353_10760	0.28	-2.8
2,353,428	-		AO353_10760	0.28	+1.7
2,353,428	-		AO353_10760	0.28	+0.1
2,353,428	-		AO353_10760	0.28	-0.5
2,353,428	-		AO353_10760	0.28	-1.3
2,353,428	-		AO353_10760	0.28	+2.2
2,353,428	-		AO353_10760	0.28	+0.7
2,353,428	-		AO353_10760	0.28	-0.1
2,353,428	-		AO353_10760	0.28	-0.8
2,353,428	-		AO353_10760	0.28	+0.8
2,353,428	-		AO353_10760	0.28	+2.1
2,353,428	-		AO353_10760	0.28	-0.2
2,353,428	-		AO353_10760	0.28	+0.7
2,353,428	-		AO353_10760	0.28	+1.1
2,353,428	-		AO353_10760	0.28	+0.1
2,353,428	-		AO353_10760	0.28	-2.1
2,353,428	-		AO353_10760	0.28	-2.2
2,353,428	-		AO353_10760	0.28	-0.4
2,353,520	+		AO353_10760	0.37	-0.1
2,353,520	+		AO353_10760	0.37	+3.8
2,353,523	+		AO353_10760	0.37	+0.8
2,353,523	+		AO353_10760	0.37	+2.4
2,353,523	+		AO353_10760	0.37	-0.2
2,353,523	+		AO353_10760	0.37	-0.3
2,353,523	+		AO353_10760	0.37	-0.9
2,353,524	-		AO353_10760	0.37	+0.4
2,353,524	-		AO353_10760	0.37	+1.2
2,353,524	-		AO353_10760	0.37	-0.7
2,353,524	-		AO353_10760	0.37	+3.9
2,353,524	-		AO353_10760	0.37	+1.0
2,353,524	-		AO353_10760	0.37	+2.1
2,353,604	+		AO353_10760	0.45	-0.2
2,353,604	+		AO353_10760	0.45	+3.0
2,353,604	+		AO353_10760	0.45	-0.6
2,353,604	+		AO353_10760	0.45	-1.2
2,353,604	+		AO353_10760	0.45	-1.6
2,353,604	+		AO353_10760	0.45	-0.4
2,353,712	+		AO353_10760	0.55	+0.5
2,353,712	+		AO353_10760	0.55	-2.3
2,353,712	+		AO353_10760	0.55	+0.3
2,353,712	+		AO353_10760	0.55	-0.4
2,353,712	+		AO353_10760	0.55	+1.7
2,353,712	+		AO353_10760	0.55	+0.5
2,353,713	-		AO353_10760	0.55	+1.6
2,353,713	-		AO353_10760	0.55	-0.8
2,353,713	-		AO353_10760	0.55	+1.1
2,353,713	-		AO353_10760	0.55	+2.7
2,353,713	-		AO353_10760	0.55	-0.5
2,353,713	-		AO353_10760	0.55	+0.6
2,353,713	-		AO353_10760	0.55	+1.0
2,353,713	-		AO353_10760	0.55	-0.1
2,353,713	-		AO353_10760	0.55	-1.5
2,353,843	+		AO353_10760	0.67	-0.3
2,353,844	-		AO353_10760	0.67	-1.3
2,353,886	+		AO353_10760	0.71	-0.4
2,353,886	+		AO353_10760	0.71	+0.2
2,353,886	+		AO353_10760	0.71	+0.9
2,353,886	+		AO353_10760	0.71	+0.8
2,353,886	+		AO353_10760	0.71	-0.6
2,353,886	+		AO353_10760	0.71	+2.3
2,353,886	+		AO353_10760	0.71	+1.4
2,353,887	-		AO353_10760	0.71	+0.8
2,353,887	-		AO353_10760	0.71	-2.0
2,353,887	-		AO353_10760	0.71	+1.1
2,353,887	-		AO353_10760	0.71	+0.7
2,353,887	-		AO353_10760	0.71	+0.0
2,353,887	-		AO353_10760	0.71	-0.4
2,353,887	-		AO353_10760	0.71	+1.4
2,353,887	-		AO353_10760	0.71	+1.4
2,353,887	-		AO353_10760	0.71	-0.7
2,353,887	-		AO353_10760	0.71	-1.1
2,353,924	+		AO353_10760	0.74	+0.8
2,353,924	+		AO353_10760	0.74	-1.6
2,353,924	+		AO353_10760	0.74	-0.9
2,353,924	+		AO353_10760	0.74	+2.0
2,353,925	-		AO353_10760	0.74	+0.3
2,353,925	-		AO353_10760	0.74	-0.7
2,354,057	+		AO353_10760	0.87	+0.3
2,354,057	+		AO353_10760	0.87	+0.1
2,354,057	+		AO353_10760	0.87	-0.1
2,354,057	+		AO353_10760	0.87	-2.3
2,354,057	+		AO353_10760	0.87	+0.1
2,354,057	+		AO353_10760	0.87	-0.7
2,354,057	+		AO353_10760	0.87	+0.9
2,354,057	+		AO353_10760	0.87	+2.4
2,354,057	+		AO353_10760	0.87	+1.5
2,354,057	+		AO353_10760	0.87	-0.2
2,354,057	+		AO353_10760	0.87	-0.3
2,354,057	+		AO353_10760	0.87	-0.7
2,354,057	+		AO353_10760	0.87	+0.4
2,354,058	-		AO353_10760	0.87	-2.3
2,354,058	-		AO353_10760	0.87	+1.1
2,354,058	-		AO353_10760	0.87	+0.8
2,354,058	-		AO353_10760	0.87	-2.1
2,354,058	-		AO353_10760	0.87	+0.9
2,354,058	-		AO353_10760	0.87	+0.3
2,354,058	-		AO353_10760	0.87	+1.0
2,354,058	-		AO353_10760	0.87	-1.9
2,354,058	-		AO353_10760	0.87	-0.3
2,354,058	-		AO353_10760	0.87	+1.9
2,354,058	-		AO353_10760	0.87	+3.0