Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09565

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,098,391	+		AO353_09555	0.71	+1.2
2,098,413	+		AO353_09555	0.72	-0.9
2,098,413	+		AO353_09555	0.72	-0.3
2,098,413	+		AO353_09555	0.72	+1.5
2,098,414	-		AO353_09555	0.72	-2.8
2,098,488	+		AO353_09555	0.78	+4.5
2,098,488	+		AO353_09555	0.78	+2.1
2,098,489	-		AO353_09555	0.78	+2.0
2,098,801	-				+2.1
2,098,869	+		AO353_09560	0.14	-1.4
2,098,870	-		AO353_09560	0.14	-2.0
2,098,878	+		AO353_09560	0.15	-0.3
2,099,080	-		AO353_09560	0.55	-0.1
2,099,295	-				-0.6
2,099,337	+				+0.7
2,099,359	+				-0.8
2,099,359	+				-2.8
2,099,359	+				-0.5
2,099,359	+				+0.6
2,099,359	+				+0.6
2,099,359	+				+1.2
2,099,359	+				+4.3
2,099,359	+				+1.1
2,099,359	+				-1.8
2,099,359	+				+0.3
2,099,359	+				-0.9
2,099,359	+				-0.2
2,099,359	+				+0.6
2,099,360	-				+0.4
2,099,360	-				-0.9
2,099,360	-				+2.6
2,099,360	-				-0.8
2,099,360	-				+2.7
2,099,360	-				-0.9
2,099,360	-				-2.1
2,099,360	-				-0.9
2,099,360	-				-0.2
2,099,360	-				+2.0
2,099,360	-				-1.6
2,099,360	-				-1.3
2,099,360	-				-0.1
2,099,360	-				-0.3
2,099,360	-				+0.0
2,099,360	-				-0.3
2,099,360	-				-1.8
2,099,360	-				+0.8
2,099,360	-				-0.5
2,099,360	-				-1.5
2,099,363	+				-0.5
2,099,363	+				-1.8
2,099,363	+				+2.5
2,099,363	+				+1.2
2,099,363	+				-1.2
2,099,363	+				+3.6
2,099,363	+				-1.7
2,099,363	+				+2.1
2,099,363	+				-1.2
2,099,364	-				-0.6
2,099,364	-				-0.8
2,099,364	-				-1.3
2,099,364	-				+0.1
2,099,364	-				-0.9
2,099,364	-				+0.1
2,099,371	+				-1.3
2,099,372	-				+0.2
2,099,404	+				-0.8
2,099,404	+				-1.2
2,099,404	+				+1.9
2,099,404	+				-0.9
2,099,404	+				+0.9
2,099,404	+				-0.6
2,099,404	+				+0.3
2,099,404	+				+1.1
2,099,404	+				+0.4
2,099,404	+				+2.7
2,099,404	+				-1.7
2,099,405	-				+1.1
2,099,405	-				-3.2
2,099,405	-				-1.1
2,099,405	-				+1.1
2,099,405	-				-0.9
2,099,405	-				+0.1
2,099,405	-				-1.1
2,099,405	-				-0.8
2,099,405	-				+2.0
2,099,405	-				-0.5
2,099,405	-				-2.1
2,099,405	-				+0.7
2,099,405	-				-0.6
2,099,418	+				-1.0
2,099,419	-				-1.1
2,099,487	+				+0.5
2,099,487	+				-1.5
2,099,487	+				-1.1
2,099,488	-				-0.8
2,099,488	-				-0.4
2,099,671	+		AO353_09565	0.20	+0.7
2,099,672	-		AO353_09565	0.20	+1.7
2,099,825	-		AO353_09565	0.31	-2.1
2,099,872	-		AO353_09565	0.34	+1.8
2,100,200	+		AO353_09565	0.57	+3.4
2,100,201	-		AO353_09565	0.57	+1.1
2,100,397	+		AO353_09565	0.71	-0.1
2,100,397	+		AO353_09565	0.71	+1.0
2,100,398	-		AO353_09565	0.71	-0.4
2,100,510	+		AO353_09565	0.79	+0.1
2,100,510	+		AO353_09565	0.79	+0.5
2,100,511	-		AO353_09565	0.79	+1.3
2,100,511	-		AO353_09565	0.79	+1.3
2,100,511	-		AO353_09565	0.79	+4.4
2,100,511	-		AO353_09565	0.79	-2.4
2,100,511	-		AO353_09565	0.79	+0.9
2,100,526	+		AO353_09565	0.80	+3.2
2,100,527	-		AO353_09565	0.80	-2.0
2,100,601	+		AO353_09565	0.86	+3.4
2,100,601	+		AO353_09565	0.86	+0.6
2,100,601	+		AO353_09565	0.86	-0.2
2,100,601	+		AO353_09565	0.86	-0.9
2,100,602	-		AO353_09565	0.86	+1.9
2,100,617	+		AO353_09565	0.87	-1.9
2,100,621	+		AO353_09565	0.87	+0.8
2,100,621	+		AO353_09565	0.87	+3.1
2,100,621	+		AO353_09565	0.87	+1.2
2,100,621	+		AO353_09565	0.87	+0.6
2,100,621	+		AO353_09565	0.87	-0.7
2,100,621	+		AO353_09565	0.87	+1.5
2,100,621	+		AO353_09565	0.87	+1.5
2,100,621	+		AO353_09565	0.87	+0.2
2,100,622	-		AO353_09565	0.87	+3.3
2,100,622	-		AO353_09565	0.87	-0.1
2,100,622	-		AO353_09565	0.87	-0.2
2,100,622	-		AO353_09565	0.87	+0.9
2,100,622	-		AO353_09565	0.87	-2.6
2,100,622	-		AO353_09565	0.87	-1.4
2,100,622	-		AO353_09565	0.87	-0.3
2,100,622	-		AO353_09565	0.87	+0.6
2,100,622	-		AO353_09565	0.87	+2.0
2,100,622	-		AO353_09565	0.87	+3.9
2,100,639	+		AO353_09565	0.88	+0.4
2,100,667	+				-0.2
2,100,667	+				+3.8
2,100,667	+				+1.1
2,100,668	-				+1.8
2,100,668	-				-2.7
2,100,690	-				-0.4
2,100,701	-				+1.2
2,100,767	-				-3.2
2,100,777	+				+2.7
2,100,777	+				-1.5
2,100,777	+				-1.2
2,100,777	+				+1.5
2,100,778	-				+1.8
2,100,778	-				-0.2
2,100,778	-				+0.2
2,100,778	-				+0.7
2,100,781	+				-0.2
2,100,781	+				-0.4
2,100,781	+				+2.5
2,100,781	+				+0.2
2,100,781	+				+3.9
2,100,781	+				+2.1
2,100,781	+				+1.0
2,100,782	-				+0.9
2,100,782	-				-0.2
2,100,782	-				-0.5
2,100,782	-				-0.2
2,100,782	-				-1.5
2,100,782	-				+3.1
2,100,782	-				+4.0
2,100,782	-				+0.9
2,100,782	-				+1.3
2,100,782	-				+1.2
2,100,782	-				+3.3
2,100,787	+				-0.8
2,100,787	+				-0.9
2,100,788	-				-0.9
2,100,788	-				+0.4
2,100,850	+				+1.3
2,100,875	+				-1.7
2,100,875	+				+1.4
2,100,875	+				+0.4
2,100,875	+				+2.1
2,100,875	+				+2.6
2,100,875	+				-0.9
2,100,875	+				+1.3
2,100,875	+				+2.0
2,100,876	-				+0.1
2,100,876	-				-1.5
2,100,876	-				-1.5
2,100,876	-				+0.2
2,100,876	-				-1.2
2,100,956	+				-0.0
2,100,956	+				+0.0
2,100,956	+				-0.3
2,100,956	+				+1.6
2,100,957	-				-3.0
2,100,957	-				+2.6
2,100,957	-				+0.9
2,100,957	-				-1.7
2,100,957	-				-0.3
2,100,993	+				-0.5
2,100,993	+				+1.6
2,100,994	-				+0.8
2,101,023	+				+0.9
2,101,023	+				-0.2
2,101,023	+				+2.6
2,101,023	+				+3.3
2,101,023	+				-0.2
2,101,023	+				-0.6
2,101,023	+				+0.6
2,101,023	+				+1.1
2,101,023	+				+0.7
2,101,023	+				+0.5
2,101,023	+				+1.9
2,101,024	-				+0.6
2,101,024	-				-1.2
2,101,024	-				+1.6
2,101,024	-				-1.3
2,101,024	-				+0.5
2,101,024	-				-0.2
2,101,024	-				-1.8
2,101,024	-				-0.2
2,101,024	-				-3.1
2,101,024	-				+0.3
2,101,024	-				-1.7
2,101,024	-				-2.5
2,101,024	-				-0.9
2,101,024	-				-1.5
2,101,028	+				-2.2
2,101,028	+				-2.9
2,101,028	+				-0.6
2,101,028	+				+0.6
2,101,029	-				+1.6
2,101,029	-				-1.4
2,101,029	-				+0.2
2,101,029	-				-1.1
2,101,043	+				+2.3
2,101,043	+				-1.3
2,101,043	+				-1.4
2,101,043	+				+3.2
2,101,043	+				+1.6
2,101,043	+				+2.7
2,101,044	-				-1.6
2,101,044	-				-1.5
2,101,044	-				-0.4
2,101,044	-				-1.7
2,101,044	-				-1.8
2,101,044	-				+0.4
2,101,044	-				-0.3
2,101,044	-				-0.8
2,101,044	-				+0.1
2,101,047	+				-1.9
2,101,047	+				+3.4
2,101,047	+				+2.0
2,101,047	+				+1.5
2,101,047	+				-0.7
2,101,047	+				-1.4
2,101,047	+				+0.4
2,101,047	+				-0.1
2,101,047	+				+1.4
2,101,047	+				+0.7
2,101,047	+				-0.5
2,101,047	+				+0.8
2,101,047	+				-1.6
2,101,047	+				-1.2
2,101,047	+				+1.4
2,101,048	-				+1.1
2,101,048	-				-1.6
2,101,048	-				+0.2
2,101,048	-				+0.4
2,101,048	-				-1.2
2,101,048	-				-2.9
2,101,048	-				-0.2
2,101,048	-				+0.2
2,101,048	-				-2.1
2,101,048	-				-1.4
2,101,048	-				+0.2
2,101,050	+				+0.5
2,101,050	+				+0.6
2,101,051	-				-0.5
2,101,051	-				-0.4
2,101,051	-				-0.7
2,101,051	-				-0.9
2,101,051	-				-1.1
2,101,077	+				+1.5
2,101,077	+				-1.0
2,101,078	-				+1.4
2,101,080	-				-1.1
2,101,089	+				-0.4
2,101,089	+				-0.8
2,101,089	+				+1.0
2,101,089	+				+2.0
2,101,089	+				+1.1
2,101,090	-				-1.6
2,101,090	-				+1.1
2,101,122	+				+1.9
2,101,122	+				+1.2
2,101,122	+				+2.9
2,101,122	+				-1.8
2,101,123	-				+1.9
2,101,123	-				-1.9
2,101,123	-				-0.9
2,101,123	-				-0.2
2,101,123	-				+0.5
2,101,123	-				-1.5
2,101,217	+				-0.9
2,101,217	+				+1.3
2,101,217	+				+2.5
2,101,218	-				-0.3
2,101,218	-				+0.9
2,101,218	-				+1.4
2,101,218	-				-0.7
2,101,273	+				+1.4
2,101,274	-				-0.3
2,101,274	-				+1.6
2,101,344	-		AO353_09570	0.13	-2.8
2,101,410	+		AO353_09570	0.19	+1.8
2,101,410	+		AO353_09570	0.19	+1.1
2,101,411	-		AO353_09570	0.20	+1.9
2,101,411	-		AO353_09570	0.20	-0.6
2,101,422	+		AO353_09570	0.21	+0.1
2,101,422	+		AO353_09570	0.21	-0.7
2,101,505	+		AO353_09570	0.29	+0.3
2,101,505	+		AO353_09570	0.29	+2.8
2,101,506	-		AO353_09570	0.29	+0.2
2,101,517	-		AO353_09570	0.30	+3.4
2,101,517	-		AO353_09570	0.30	+0.3
2,101,517	-		AO353_09570	0.30	-0.5
2,101,517	-		AO353_09570	0.30	+0.5
2,101,650	+		AO353_09570	0.43	+1.0
2,101,650	+				+0.8
2,101,651	-		AO353_09570	0.43	-1.4
2,101,651	-		AO353_09570	0.43	+1.4
2,101,651	-		AO353_09570	0.43	+0.0