Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08195

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,803,651	+		AO353_08185	0.58	+0.2
1,803,651	+		AO353_08185	0.58	-0.4
1,803,651	+		AO353_08185	0.58	+0.2
1,803,651	+		AO353_08185	0.58	-0.1
1,803,652	-		AO353_08185	0.58	-1.2
1,803,652	-		AO353_08185	0.58	-1.0
1,803,652	-		AO353_08185	0.58	+4.4
1,803,652	-		AO353_08185	0.58	-0.5
1,803,696	+		AO353_08185	0.65	-1.1
1,803,696	+		AO353_08185	0.65	-0.1
1,803,697	-		AO353_08185	0.65	+0.2
1,803,697	-		AO353_08185	0.65	-0.6
1,803,705	+		AO353_08185	0.67	-0.2
1,803,705	+		AO353_08185	0.67	-0.8
1,803,705	+		AO353_08185	0.67	-1.2
1,803,705	+		AO353_08185	0.67	-2.5
1,803,706	-		AO353_08185	0.67	-0.5
1,803,706	-		AO353_08185	0.67	-0.7
1,803,827	+		AO353_08185	0.86	-0.8
1,803,832	+		AO353_08185	0.87	+0.3
1,803,832	+		AO353_08185	0.87	+1.8
1,803,832	+		AO353_08185	0.87	-1.4
1,803,832	+		AO353_08185	0.87	-0.6
1,803,832	+		AO353_08185	0.87	+0.6
1,803,833	-		AO353_08185	0.87	+1.5
1,803,833	-		AO353_08185	0.87	-0.5
1,803,833	-		AO353_08185	0.87	-1.4
1,803,833	-		AO353_08185	0.87	-2.4
1,803,833	-		AO353_08185	0.87	-0.8
1,803,833	-		AO353_08185	0.87	+2.3
1,803,839	+		AO353_08185	0.88	-1.2
1,803,839	+		AO353_08185	0.88	+0.1
1,803,839	+		AO353_08185	0.88	-1.6
1,803,840	-		AO353_08185	0.88	-1.7
1,803,840	-		AO353_08185	0.88	+0.5
1,803,844	+		AO353_08185	0.89	+0.1
1,803,844	+		AO353_08185	0.89	-0.9
1,803,844	+		AO353_08185	0.89	-1.1
1,803,844	+		AO353_08185	0.89	+0.7
1,803,844	+		AO353_08185	0.89	+1.3
1,803,844	+		AO353_08185	0.89	-1.3
1,803,844	+		AO353_08185	0.89	+0.3
1,803,845	-		AO353_08185	0.89	+1.2
1,803,845	-		AO353_08185	0.89	+2.2
1,803,845	-		AO353_08185	0.89	+1.3
1,803,845	-		AO353_08185	0.89	-0.5
1,803,845	-		AO353_08185	0.89	+0.0
1,803,847	+		AO353_08185	0.90	-0.7
1,803,847	+		AO353_08185	0.90	-1.8
1,803,847	+		AO353_08185	0.90	+3.6
1,803,848	-		AO353_08185	0.90	-1.2
1,803,848	-		AO353_08185	0.90	-0.7
1,803,848	-		AO353_08185	0.90	-1.1
1,803,848	-		AO353_08185	0.90	+1.2
1,803,848	-		AO353_08185	0.90	-1.5
1,803,848	-		AO353_08185	0.90	-1.7
1,803,848	-		AO353_08185	0.90	+1.1
1,803,848	-		AO353_08185	0.90	-2.6
1,803,864	+				-1.7
1,803,864	+				-1.9
1,803,864	+				+1.4
1,803,864	+				+0.4
1,803,864	+				+2.2
1,803,865	-				+0.7
1,803,865	-				-1.2
1,803,865	-				-1.3
1,803,902	-				+0.9
1,803,910	-				-2.2
1,803,946	+				+2.5
1,803,958	+				-0.9
1,803,958	+				-1.9
1,803,958	+				+1.4
1,803,958	+				-1.4
1,803,958	+				-1.5
1,803,959	-				-1.4
1,803,959	-				+1.6
1,803,959	-				+0.8
1,803,961	+				-0.7
1,803,961	+				-0.6
1,803,961	+				-2.0
1,804,047	+		AO353_08190	0.26	+2.5
1,804,047	+		AO353_08190	0.26	+2.6
1,804,047	+		AO353_08190	0.26	-1.0
1,804,047	+		AO353_08190	0.26	+1.1
1,804,047	+		AO353_08190	0.26	-1.1
1,804,048	-		AO353_08190	0.26	+1.6
1,804,048	-		AO353_08190	0.26	-1.2
1,804,048	-		AO353_08190	0.26	-1.8
1,804,048	-		AO353_08190	0.26	+0.0
1,804,048	-		AO353_08190	0.26	-0.8
1,804,048	-		AO353_08190	0.26	+0.6
1,804,048	-		AO353_08190	0.26	+1.6
1,804,048	-		AO353_08190	0.26	+1.6
1,804,048	-		AO353_08190	0.26	-0.6
1,804,068	+		AO353_08190	0.30	-1.7
1,804,068	+		AO353_08190	0.30	+1.8
1,804,068	+		AO353_08190	0.30	-0.3
1,804,069	-		AO353_08190	0.31	+0.0
1,804,069	-		AO353_08190	0.31	-0.1
1,804,069	-		AO353_08190	0.31	-0.4
1,804,069	-		AO353_08190	0.31	-3.2
1,804,069	-		AO353_08190	0.31	-0.6
1,804,069	-		AO353_08190	0.31	-0.6
1,804,202	+		AO353_08190	0.61	-1.2
1,804,202	+		AO353_08190	0.61	-2.0
1,804,203	-		AO353_08190	0.61	-1.4
1,804,251	+		AO353_08190	0.72	+0.1
1,804,251	+		AO353_08190	0.72	-0.9
1,804,251	+		AO353_08190	0.72	-1.8
1,804,252	-		AO353_08190	0.73	+1.3
1,804,252	-		AO353_08190	0.73	+2.3
1,804,252	-		AO353_08190	0.73	+0.6
1,804,254	+		AO353_08190	0.73	+1.0
1,804,254	+		AO353_08190	0.73	+2.1
1,804,254	+		AO353_08190	0.73	-1.2
1,804,254	+		AO353_08190	0.73	-0.6
1,804,254	+		AO353_08190	0.73	-0.5
1,804,254	+		AO353_08190	0.73	-0.1
1,804,254	+		AO353_08190	0.73	+0.8
1,804,254	+		AO353_08190	0.73	-0.5
1,804,254	+		AO353_08190	0.73	+0.3
1,804,254	+		AO353_08190	0.73	-0.7
1,804,254	+		AO353_08190	0.73	-0.8
1,804,254	+		AO353_08190	0.73	-0.3
1,804,254	+		AO353_08190	0.73	+0.6
1,804,255	-		AO353_08190	0.73	+1.1
1,804,255	-		AO353_08190	0.73	+1.9
1,804,255	-		AO353_08190	0.73	-1.9
1,804,255	-		AO353_08190	0.73	-0.3
1,804,255	-		AO353_08190	0.73	+0.2
1,804,255	-		AO353_08190	0.73	-0.4
1,804,255	-		AO353_08190	0.73	-3.2
1,804,255	-		AO353_08190	0.73	-0.9
1,804,255	-		AO353_08190	0.73	+0.6
1,804,255	-		AO353_08190	0.73	-1.2
1,804,622	+		AO353_08195	0.43	-1.4
1,804,622	+		AO353_08195	0.43	-1.1
1,804,622	+		AO353_08195	0.43	-0.3
1,804,623	-		AO353_08195	0.43	-0.3
1,804,623	-		AO353_08195	0.43	-3.0
1,804,623	-		AO353_08195	0.43	+0.3
1,804,623	-		AO353_08195	0.43	-0.9
1,804,623	-		AO353_08195	0.43	+0.6
1,804,623	-		AO353_08195	0.43	-1.8
1,804,635	-		AO353_08195	0.45	-2.9
1,804,743	+		AO353_08195	0.63	-1.0
1,804,744	-		AO353_08195	0.63	-1.1
1,804,836	-		AO353_08195	0.79	-2.0
1,804,836	-		AO353_08195	0.79	-2.1
1,804,836	-		AO353_08195	0.79	-1.1
1,804,991	+				-0.5
1,804,991	+				+2.4
1,804,992	-				+0.5
1,805,050	+				+1.2
1,805,050	+				+0.1
1,805,050	+				+0.4
1,805,050	+				-1.7
1,805,050	+				-0.4
1,805,050	+				-0.6
1,805,050	+				-0.4
1,805,050	+				-1.9
1,805,050	+				-2.0
1,805,050	+				-0.1
1,805,050	+				+1.4
1,805,050	+				-2.7
1,805,050	+				-1.2
1,805,050	+				-0.6
1,805,051	-				-1.6
1,805,051	-				+0.3
1,805,051	-				+1.4
1,805,051	-				-0.3
1,805,051	-				+0.8
1,805,051	-				+1.4
1,805,051	-				+0.1
1,805,051	-				-0.8
1,805,051	-				+0.6
1,805,051	-				+3.0
1,805,051	-				-1.4
1,805,087	-		AO353_08200	0.11	-1.7
1,805,087	-		AO353_08200	0.11	-0.3
1,805,087	-		AO353_08200	0.11	+0.1
1,805,087	-		AO353_08200	0.11	-2.2
1,805,087	-		AO353_08200	0.11	-1.4
1,805,137	+		AO353_08200	0.15	+0.2
1,805,137	+		AO353_08200	0.15	-1.5
1,805,137	+		AO353_08200	0.15	-0.4
1,805,137	+		AO353_08200	0.15	-0.7
1,805,137	+		AO353_08200	0.15	-0.7
1,805,137	+		AO353_08200	0.15	+0.2
1,805,137	+		AO353_08200	0.15	-2.5
1,805,137	+		AO353_08200	0.15	-1.0
1,805,137	+		AO353_08200	0.15	+0.3
1,805,138	-		AO353_08200	0.15	-1.0
1,805,138	-		AO353_08200	0.15	+0.5
1,805,138	-		AO353_08200	0.15	-0.8
1,805,138	-		AO353_08200	0.15	-1.6
1,805,138	-		AO353_08200	0.15	+0.9
1,805,138	-		AO353_08200	0.15	+1.2
1,805,138	-		AO353_08200	0.15	-1.6
1,805,138	-		AO353_08200	0.15	-1.3
1,805,138	-		AO353_08200	0.15	+0.1
1,805,138	-		AO353_08200	0.15	-0.1
1,805,186	-		AO353_08200	0.19	-1.2
1,805,186	-		AO353_08200	0.19	-0.6
1,805,186	-		AO353_08200	0.19	-2.0
1,805,728	+		AO353_08200	0.64	-0.9
1,805,729	-		AO353_08200	0.64	-1.5
1,805,743	+		AO353_08200	0.65	+0.7
1,805,743	+		AO353_08200	0.65	+0.6
1,805,743	+		AO353_08200	0.65	+3.7
1,805,743	+		AO353_08200	0.65	-1.4
1,805,744	-		AO353_08200	0.65	-0.5
1,805,772	+		AO353_08200	0.67	-0.6
1,805,782	+		AO353_08200	0.68	-1.4
1,805,782	+		AO353_08200	0.68	+0.0
1,805,782	+		AO353_08200	0.68	-0.5
1,805,783	-		AO353_08200	0.68	-0.2
1,805,783	-		AO353_08200	0.68	-1.4
1,805,890	+		AO353_08200	0.77	-0.7
1,805,890	+		AO353_08200	0.77	+2.2
1,805,890	+		AO353_08200	0.77	+1.1
1,805,891	-		AO353_08200	0.77	-2.4
1,805,891	-		AO353_08200	0.77	+3.2
1,805,891	-		AO353_08200	0.77	-1.4
1,805,891	-		AO353_08200	0.77	+0.4
1,805,891	-		AO353_08200	0.77	+1.2
1,805,891	-		AO353_08200	0.77	-2.6
1,805,891	-		AO353_08200	0.77	-2.6
1,805,891	-		AO353_08200	0.77	-0.1
1,805,891	-		AO353_08200	0.77	+2.4