Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08090

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,786,047	+		AO353_08085	0.85	+3.2
1,786,047	+		AO353_08085	0.85	-0.7
1,786,101	+		AO353_08085	0.86	-0.8
1,786,101	+		AO353_08085	0.86	-2.3
1,786,101	+		AO353_08085	0.86	+5.0
1,786,101	+		AO353_08085	0.86	+2.4
1,786,101	+		AO353_08085	0.86	+2.0
1,786,101	+		AO353_08085	0.86	+2.1
1,786,101	+		AO353_08085	0.86	-0.4
1,786,101	+		AO353_08085	0.86	+2.7
1,786,101	+		AO353_08085	0.86	+2.4
1,786,101	+		AO353_08085	0.86	+1.5
1,786,101	+		AO353_08085	0.86	-0.4
1,786,102	-		AO353_08085	0.86	-0.2
1,786,102	-		AO353_08085	0.86	-0.0
1,786,102	-		AO353_08085	0.86	-0.4
1,786,102	-		AO353_08085	0.86	-0.4
1,786,102	-		AO353_08085	0.86	-1.5
1,786,102	-		AO353_08085	0.86	+0.2
1,786,102	-		AO353_08085	0.86	-0.6
1,786,338	+				+1.3
1,786,609	-				-0.6
1,786,731	+				+1.6
1,786,853	-				+1.5
1,786,853	-				-2.7
1,786,908	+				+3.5
1,786,908	+				+4.2
1,786,908	+				+3.6
1,786,908	+				-0.8
1,786,908	+				-0.5
1,786,908	+				-0.2
1,786,908	+				-1.2
1,786,908	+				+1.7
1,786,908	+				+1.7
1,786,908	+				+2.8
1,786,908	+				-1.3
1,786,908	+				+3.3
1,786,908	+				+0.8
1,786,908	+				+0.2
1,786,909	-				+1.3
1,786,909	-				-2.9
1,786,909	-				+3.1
1,786,909	-				-0.4
1,786,909	-				+0.7
1,786,909	-				-2.0
1,786,909	-				-1.2
1,786,909	-				-0.4
1,786,909	-				+1.8
1,786,909	-				-0.8
1,786,909	-				-2.3
1,787,134	+				-0.3
1,787,135	-				+0.5
1,787,135	-				-1.7
1,787,135	-				+0.5
1,787,178	+		AO353_08090	0.10	+6.5
1,787,178	+		AO353_08090	0.10	+1.9
1,787,178	+		AO353_08090	0.10	-0.0
1,787,178	+		AO353_08090	0.10	-1.8
1,787,179	-		AO353_08090	0.10	+0.2
1,787,179	-		AO353_08090	0.10	+3.4
1,787,179	-		AO353_08090	0.10	-2.0
1,787,179	-		AO353_08090	0.10	+1.6
1,787,466	+		AO353_08090	0.24	-1.2
1,787,467	-		AO353_08090	0.24	+1.3
1,787,467	-		AO353_08090	0.24	+1.4
1,787,864	+		AO353_08090	0.44	+3.2
1,787,865	-		AO353_08090	0.44	-0.8
1,787,982	+		AO353_08090	0.49	+1.9
1,788,010	+		AO353_08090	0.51	+1.4
1,788,087	-		AO353_08090	0.54	-0.8
1,788,598	+		AO353_08090	0.79	+0.6
1,788,598	+		AO353_08090	0.79	+3.6
1,788,598	+		AO353_08090	0.79	+3.5
1,788,598	+		AO353_08090	0.79	+3.7
1,788,598	+		AO353_08090	0.79	+3.3
1,788,598	+		AO353_08090	0.79	+2.0
1,788,599	-		AO353_08090	0.79	+3.0
1,788,599	-		AO353_08090	0.79	-1.9
1,788,599	-		AO353_08090	0.79	+2.9
1,788,599	-		AO353_08090	0.79	+5.7
1,788,599	-		AO353_08090	0.79	+2.3
1,788,599	-		AO353_08090	0.79	+3.6
1,788,599	-		AO353_08090	0.79	+3.9
1,788,599	-		AO353_08090	0.79	+0.8
1,788,599	-		AO353_08090	0.79	+3.4
1,788,640	-		AO353_08090	0.81	-1.6
1,788,743	+		AO353_08090	0.86	+1.6
1,788,744	-		AO353_08090	0.86	+3.0
1,788,744	-		AO353_08090	0.86	+2.0
1,788,878	+				+3.8
1,788,878	+				+4.0
1,788,878	+				+3.4
1,788,878	+				+4.7
1,788,878	+				+3.2
1,788,878	+				+0.9
1,788,878	+				+3.6
1,788,878	+				+3.9
1,788,878	+				+3.0
1,788,878	+				+0.8
1,788,879	-				+2.0
1,788,879	-				-0.5
1,788,879	-				-0.5
1,788,879	-				+2.0
1,788,879	-				-0.6
1,788,879	-				+1.9
1,788,879	-				-0.5
1,788,890	+				+3.0
1,788,891	-				+1.6
1,788,903	+				-0.6
1,788,911	+				+4.3
1,788,911	+				+2.2
1,788,912	-				+2.2
1,789,000	-				-2.3
1,789,011	+				+0.4
1,789,011	+				+2.6
1,789,011	+				+2.4
1,789,011	+				+4.2
1,789,011	+				-0.7
1,789,011	+				-1.3
1,789,012	-				+1.4
1,789,012	-				-1.0
1,789,012	-				-1.6
1,789,012	-				-1.5
1,789,012	-				+5.5
1,789,021	+				+3.9
1,789,021	+				+0.7
1,789,022	-				+3.9
1,789,022	-				+0.5
1,789,022	-				+2.3
1,789,022	-				-0.3
1,789,038	+				-1.2
1,789,038	+				-0.4
1,789,095	+				+2.6
1,789,095	+				-0.2
1,789,096	-				+2.0
1,789,182	+				-0.8
1,789,182	+				-1.2
1,789,183	-				+1.5
1,789,191	-				-0.9
1,789,222	+				+4.9
1,789,222	+				-0.7
1,789,222	+				+7.0
1,789,222	+				+3.7
1,789,222	+				+3.3
1,789,222	+				+2.2
1,789,222	+				+0.4
1,789,222	+				+2.9
1,789,222	+				+4.3
1,789,222	+				-1.4
1,789,222	+				+0.6
1,789,222	+				+3.5
1,789,222	+				+1.9
1,789,223	-				-1.7
1,789,223	-				-1.1
1,789,223	-				-1.5
1,789,223	-				-0.3
1,789,304	-		AO353_08095	0.17	-0.9
1,789,304	-		AO353_08095	0.17	+1.5
1,789,419	+		AO353_08095	0.38	-0.3
1,789,419	+		AO353_08095	0.38	+1.9
1,789,419	+		AO353_08095	0.38	+2.7
1,789,420	-		AO353_08095	0.38	-1.3
1,789,420	-		AO353_08095	0.38	+0.2
1,789,420	-		AO353_08095	0.38	+0.1
1,789,420	-		AO353_08095	0.38	+0.7
1,789,420	-		AO353_08095	0.38	-0.5
1,789,420	-		AO353_08095	0.38	+1.8
1,789,420	-		AO353_08095	0.38	-0.5
1,789,420	-		AO353_08095	0.38	-0.4
1,789,420	-		AO353_08095	0.38	+0.8
1,789,420	-		AO353_08095	0.38	-1.6
1,789,420	-		AO353_08095	0.38	-0.5
1,789,421	+		AO353_08095	0.39	+3.1
1,789,422	-		AO353_08095	0.39	+0.8
1,789,422	-		AO353_08095	0.39	-0.5
1,789,436	-		AO353_08095	0.41	-0.6
1,789,486	+		AO353_08095	0.51	+3.9
1,789,486	+		AO353_08095	0.51	-1.0
1,789,486	+		AO353_08095	0.51	-0.6
1,789,486	+		AO353_08095	0.51	-1.2
1,789,486	+		AO353_08095	0.51	-1.9
1,789,486	+		AO353_08095	0.51	+5.5
1,789,486	+		AO353_08095	0.51	+5.4
1,789,486	+		AO353_08095	0.51	+3.1
1,789,487	-		AO353_08095	0.51	+0.1
1,789,487	-		AO353_08095	0.51	+0.8
1,789,487	-		AO353_08095	0.51	+0.6
1,789,487	-		AO353_08095	0.51	+0.4
1,789,487	-		AO353_08095	0.51	-1.6
1,789,613	+		AO353_08095	0.74	-0.2
1,789,613	+		AO353_08095	0.74	+0.6
1,789,613	+		AO353_08095	0.74	+1.7
1,789,613	+		AO353_08095	0.74	+2.0
1,789,614	-		AO353_08095	0.74	-1.2
1,789,827	+		AO353_08100	0.17	+2.2
1,789,827	+		AO353_08100	0.17	+4.5
1,789,827	+		AO353_08100	0.17	+1.7
1,789,828	-		AO353_08100	0.18	-1.0
1,789,828	-		AO353_08100	0.18	-2.0
1,789,828	-		AO353_08100	0.18	-0.6