Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08080

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,779,531	-		AO353_08070	0.84	+1.8
1,779,573	+		AO353_08070	0.88	-0.0
1,779,574	-		AO353_08070	0.88	-0.6
1,779,574	-		AO353_08070	0.88	-0.2
1,779,574	-		AO353_08070	0.88	+2.2
1,779,574	-		AO353_08070	0.88	+1.0
1,779,692	+				-3.2
1,779,693	-				-2.8
1,779,693	-				-0.4
1,779,693	-				-1.4
1,779,693	-				+0.4
1,779,719	+				+1.2
1,779,719	+				+1.4
1,779,719	+				-1.3
1,779,719	+				-2.2
1,779,719	+				+0.8
1,779,719	+				+2.9
1,779,719	+				-0.2
1,779,720	-				-0.6
1,779,720	-				+0.1
1,779,720	-				-3.3
1,779,720	-				+1.0
1,779,720	-				-1.1
1,779,720	-				+0.4
1,779,720	-				-1.2
1,779,720	-				-2.2
1,779,720	-				-2.3
1,779,720	-				-0.6
1,779,781	+				-2.7
1,779,781	+				-1.5
1,779,781	+				+2.9
1,779,782	-				-1.5
1,779,782	-				+0.8
1,779,782	-				+0.0
1,779,782	-				-1.9
1,779,782	-				-0.6
1,779,782	-				-0.5
1,779,782	-				+1.7
1,779,881	+		AO353_08075	0.18	-0.3
1,779,881	+		AO353_08075	0.18	+1.2
1,779,881	+		AO353_08075	0.18	+0.8
1,779,882	-		AO353_08075	0.18	+0.7
1,779,895	+		AO353_08075	0.20	-2.5
1,779,895	+		AO353_08075	0.20	+0.5
1,779,895	+		AO353_08075	0.20	+0.7
1,779,895	+		AO353_08075	0.20	+3.2
1,779,895	+		AO353_08075	0.20	+0.7
1,779,895	+		AO353_08075	0.20	+1.6
1,779,895	+		AO353_08075	0.20	+0.5
1,779,895	+		AO353_08075	0.20	-0.0
1,779,896	-		AO353_08075	0.20	-1.2
1,779,896	-		AO353_08075	0.20	-3.0
1,779,994	+		AO353_08075	0.36	+0.6
1,779,994	+		AO353_08075	0.36	+0.1
1,779,995	-		AO353_08075	0.36	+1.2
1,779,995	-		AO353_08075	0.36	+0.6
1,779,995	-		AO353_08075	0.36	-1.4
1,779,995	-		AO353_08075	0.36	-0.7
1,780,132	+		AO353_08075	0.58	-2.1
1,780,132	+		AO353_08075	0.58	+2.7
1,780,133	-		AO353_08075	0.59	+0.3
1,780,133	-		AO353_08075	0.59	+2.3
1,780,133	-		AO353_08075	0.59	-1.2
1,780,133	-		AO353_08075	0.59	-0.0
1,780,153	+		AO353_08075	0.62	-0.3
1,780,153	+		AO353_08075	0.62	-1.0
1,780,153	+		AO353_08075	0.62	-0.2
1,780,154	-		AO353_08075	0.62	-1.3
1,780,154	-		AO353_08075	0.62	-1.9
1,780,154	-		AO353_08075	0.62	-1.8
1,780,154	-		AO353_08075	0.62	+0.5
1,780,154	-		AO353_08075	0.62	+2.7
1,780,213	+		AO353_08075	0.72	+0.8
1,780,213	+		AO353_08075	0.72	-0.7
1,780,214	-		AO353_08075	0.72	-0.2
1,780,214	-		AO353_08075	0.72	-0.0
1,780,231	+		AO353_08075	0.74	+1.0
1,780,231	+		AO353_08075	0.74	+1.4
1,780,231	+		AO353_08075	0.74	-2.0
1,780,232	-		AO353_08075	0.75	+1.0
1,780,232	-		AO353_08075	0.75	-0.3
1,780,232	-		AO353_08075	0.75	-0.9
1,780,232	-		AO353_08075	0.75	-0.7
1,780,232	-		AO353_08075	0.75	+1.6
1,780,232	-		AO353_08075	0.75	+2.8
1,780,232	-		AO353_08075	0.75	+1.5
1,780,232	-		AO353_08075	0.75	+2.2
1,780,247	+		AO353_08075	0.77	+0.8
1,780,247	+		AO353_08075	0.77	-0.4
1,780,248	-		AO353_08075	0.77	-2.4
1,780,256	-		AO353_08075	0.78	-0.8
1,780,384	+				+0.9
1,780,384	+				-0.2
1,780,384	+				-1.0
1,780,384	+				+1.0
1,780,384	+				+1.6
1,780,384	+				+0.4
1,780,384	+				+1.8
1,780,384	+				+1.5
1,780,384	+				-1.2
1,780,384	+				-0.5
1,780,384	+				+0.0
1,780,385	-				+0.5
1,780,385	-				-0.4
1,780,385	-				-0.4
1,780,385	-				+3.2
1,780,385	-				+0.4
1,780,385	-				+0.3
1,780,385	-				-1.9
1,780,385	-				-0.6
1,780,385	-				+1.8
1,780,385	-				+1.3
1,780,416	+				-1.0
1,780,416	+				-0.4
1,780,416	+				-1.9
1,780,416	+				+2.1
1,780,416	+				-1.0
1,780,416	+				+0.2
1,780,416	+				-0.2
1,780,416	+				+1.3
1,780,417	-				+3.6
1,780,417	-				-0.4
1,780,417	-				+1.3
1,780,417	-				-1.0
1,780,417	-				-2.8
1,780,417	-				-0.3
1,780,417	-				+0.4
1,780,417	-				+1.8
1,780,440	+				-1.1
1,780,441	-				-2.8
1,780,441	-				+1.7
1,780,480	+				+0.5
1,780,480	+				-1.7
1,780,503	+				-1.6
1,780,503	+				-0.2
1,780,504	-				+0.8
1,780,504	-				-0.8
1,780,504	-				-0.5
1,780,504	-				+2.1
1,780,655	+		AO353_08080	0.27	+2.5
1,780,655	+		AO353_08080	0.27	+0.2
1,780,655	+		AO353_08080	0.27	+2.0
1,780,655	+		AO353_08080	0.27	+3.4
1,780,655	+		AO353_08080	0.27	+4.1
1,780,655	+		AO353_08080	0.27	-1.0
1,780,655	+		AO353_08080	0.27	-1.2
1,780,656	-		AO353_08080	0.27	-0.1
1,780,656	-		AO353_08080	0.27	+1.1
1,780,656	-		AO353_08080	0.27	-1.0
1,780,656	-		AO353_08080	0.27	+2.9
1,780,656	-		AO353_08080	0.27	+1.7
1,780,656	-		AO353_08080	0.27	+1.8
1,780,656	-		AO353_08080	0.27	+3.9
1,780,656	-		AO353_08080	0.27	+0.4
1,780,656	-		AO353_08080	0.27	-0.7
1,780,679	+		AO353_08080	0.32	+2.2
1,780,679	+		AO353_08080	0.32	+3.3
1,780,679	+		AO353_08080	0.32	+3.8
1,780,679	+		AO353_08080	0.32	+2.2
1,780,679	+		AO353_08080	0.32	+3.8
1,780,679	+		AO353_08080	0.32	+0.1
1,780,680	-		AO353_08080	0.32	+2.6
1,780,680	-		AO353_08080	0.32	+1.5
1,780,680	-		AO353_08080	0.32	-0.3
1,780,680	-		AO353_08080	0.32	-1.0
1,780,680	-		AO353_08080	0.32	-1.3
1,780,680	-		AO353_08080	0.32	-0.5
1,780,854	-		AO353_08080	0.70	+2.9
1,780,892	+		AO353_08080	0.78	-1.3
1,780,893	-		AO353_08080	0.78	-0.9
1,781,006	+				+2.7
1,781,006	+				-0.8
1,781,007	-				+1.5
1,781,007	-				-0.7
1,781,027	+				+3.4
1,781,028	-				+1.0
1,781,055	+				+1.4
1,781,056	-				+1.6
1,781,673	+		AO353_08085	0.12	-1.5
1,781,674	-		AO353_08085	0.12	-0.0
1,781,674	-		AO353_08085	0.12	-2.4
1,781,685	+		AO353_08085	0.12	+1.5
1,781,685	+		AO353_08085	0.12	+3.9
1,781,685	+		AO353_08085	0.12	+2.6
1,781,686	-		AO353_08085	0.12	-0.2
1,781,686	-		AO353_08085	0.12	-0.3
1,781,700	+		AO353_08085	0.12	+3.5
1,781,700	+		AO353_08085	0.12	-0.4
1,781,701	-		AO353_08085	0.12	+3.7
1,781,706	+		AO353_08085	0.12	+2.5
1,781,706	+		AO353_08085	0.12	+1.6
1,781,706	+		AO353_08085	0.12	+2.2
1,781,706	+		AO353_08085	0.12	+2.2
1,781,707	-		AO353_08085	0.12	+0.8
1,781,707	-		AO353_08085	0.12	+3.5
1,781,707	-		AO353_08085	0.12	-1.4
1,781,707	-		AO353_08085	0.12	+0.8
1,781,707	-		AO353_08085	0.12	+3.2
1,781,707	-		AO353_08085	0.12	+2.8
1,781,708	+		AO353_08085	0.12	-0.0
1,781,708	+		AO353_08085	0.12	+1.0
1,781,708	+		AO353_08085	0.12	+3.2
1,781,708	+		AO353_08085	0.12	+3.6
1,781,709	-		AO353_08085	0.12	-0.3
1,781,709	-		AO353_08085	0.12	+2.0
1,781,709	-		AO353_08085	0.12	+2.5
1,781,709	-		AO353_08085	0.12	+1.4
1,781,727	+		AO353_08085	0.12	+1.5
1,781,728	-		AO353_08085	0.13	+3.1
1,781,728	-		AO353_08085	0.13	+2.5
1,781,728	-		AO353_08085	0.13	+1.8
1,781,731	-		AO353_08085	0.13	+2.3
1,781,793	+		AO353_08085	0.14	+2.1
1,781,794	-		AO353_08085	0.14	+2.6