Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07535

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,657,297	+				+0.7
1,657,297	+				+1.0
1,657,297	+				-0.0
1,657,297	+				-0.5
1,657,298	-				-0.1
1,657,298	-				-0.7
1,657,298	-				+1.5
1,657,298	-				+1.5
1,657,298	-				-1.0
1,657,326	+				+2.9
1,657,327	-				-1.3
1,657,327	-				+0.5
1,657,356	+				+0.8
1,657,356	+				+0.4
1,657,356	+				-0.5
1,657,356	+				-2.9
1,657,356	+				-0.2
1,657,356	+				-1.5
1,657,356	+				-2.2
1,657,356	+				-0.0
1,657,357	-				+1.5
1,657,357	-				-1.2
1,657,357	-				-1.4
1,657,357	-				+1.0
1,657,357	-				+2.4
1,657,357	-				-0.4
1,657,357	-				-0.5
1,657,357	-				+0.7
1,657,357	-				+2.0
1,657,357	-				+1.4
1,657,357	-				-0.2
1,657,360	+				+0.1
1,657,360	+				-1.6
1,657,360	+				+0.2
1,657,360	+				+0.4
1,657,360	+				-1.0
1,657,360	+				-1.3
1,657,360	+				-0.0
1,657,361	-				+1.6
1,657,361	-				+1.1
1,657,361	-				+0.3
1,657,361	-				-1.5
1,657,361	-				+1.3
1,657,476	+		AO353_07530	0.14	-0.9
1,657,476	+		AO353_07530	0.14	+3.1
1,657,476	+		AO353_07530	0.14	+0.8
1,657,476	+		AO353_07530	0.14	+0.8
1,657,476	+		AO353_07530	0.14	-0.0
1,657,476	+		AO353_07530	0.14	-0.7
1,657,477	-		AO353_07530	0.14	-1.1
1,657,477	-		AO353_07530	0.14	+1.4
1,657,477	-		AO353_07530	0.14	+1.1
1,657,477	-		AO353_07530	0.14	-0.9
1,657,477	-		AO353_07530	0.14	-1.0
1,657,477	-		AO353_07530	0.14	-2.0
1,657,477	-		AO353_07530	0.14	-0.9
1,657,615	+		AO353_07530	0.33	-1.2
1,657,615	+		AO353_07530	0.33	+1.5
1,657,615	+		AO353_07530	0.33	-1.3
1,657,615	+		AO353_07530	0.33	-1.6
1,657,615	+		AO353_07530	0.33	+2.1
1,657,615	+		AO353_07530	0.33	+0.5
1,657,615	+		AO353_07530	0.33	+1.0
1,657,615	+		AO353_07530	0.33	+0.5
1,657,615	+		AO353_07530	0.33	-1.5
1,657,615	+		AO353_07530	0.33	-1.0
1,657,615	+		AO353_07530	0.33	+3.8
1,657,615	+		AO353_07530	0.33	-1.9
1,657,615	+		AO353_07530	0.33	+0.3
1,657,615	+		AO353_07530	0.33	-1.0
1,657,616	-		AO353_07530	0.33	+0.3
1,657,616	-		AO353_07530	0.33	+1.6
1,657,795	+		AO353_07530	0.57	+2.1
1,657,795	+		AO353_07530	0.57	+0.3
1,657,796	-		AO353_07530	0.57	+1.2
1,657,796	-		AO353_07530	0.57	-0.5
1,657,796	-		AO353_07530	0.57	-0.0
1,657,797	+		AO353_07530	0.57	-1.5
1,657,798	-		AO353_07530	0.57	-0.5
1,657,798	-		AO353_07530	0.57	+2.1
1,657,798	-		AO353_07530	0.57	-1.7
1,657,798	-		AO353_07530	0.57	-0.2
1,658,071	+				+1.5
1,658,071	+				+0.7
1,658,071	+				-0.6
1,658,072	-				+0.4
1,658,072	-				+2.3
1,658,184	+				-0.5
1,658,184	+				-0.6
1,658,184	+				+0.3
1,658,184	+				+0.4
1,658,184	+				-2.5
1,658,184	+				-0.8
1,658,185	-				+0.3
1,658,185	-				+0.7
1,658,185	-				+1.4
1,658,185	-				+6.0
1,658,185	-				+0.8
1,658,185	-				+2.5
1,658,185	-				-0.7
1,658,185	-				+0.7
1,658,185	-				+0.2
1,658,293	+		AO353_07535	0.16	+1.7
1,658,293	+		AO353_07535	0.16	+0.7
1,658,293	+		AO353_07535	0.16	-0.2
1,658,293	+		AO353_07535	0.16	+1.4
1,658,293	+		AO353_07535	0.16	-0.8
1,658,294	-		AO353_07535	0.16	+3.4
1,658,294	-		AO353_07535	0.16	+2.3
1,658,294	-		AO353_07535	0.16	-2.8
1,658,425	+		AO353_07535	0.33	+2.9
1,658,425	+		AO353_07535	0.33	+0.9
1,658,425	+		AO353_07535	0.33	+0.4
1,658,425	+		AO353_07535	0.33	+0.2
1,658,425	+		AO353_07535	0.33	-1.5
1,658,425	+				+2.9
1,658,425	+		AO353_07535	0.33	-0.5
1,658,444	+		AO353_07535	0.35	-1.7
1,658,444	+		AO353_07535	0.35	+0.4
1,658,444	+		AO353_07535	0.35	+2.7
1,658,624	+		AO353_07535	0.59	+0.8
1,658,624	+		AO353_07535	0.59	-0.8
1,658,625	-		AO353_07535	0.59	+0.5
1,658,828	+		AO353_07535	0.86	-1.9
1,658,961	-				+1.4
1,658,961	-				+1.8
1,659,003	+				-3.7
1,659,003	+				+1.0
1,659,003	+				-1.8
1,659,004	-				-1.6
1,659,004	-				-0.2
1,659,004	-				+0.3
1,659,018	+				+1.0
1,659,019	-				+0.8
1,659,019	-				-1.0
1,659,019	-				+1.6
1,659,088	+				+0.1
1,659,089	-				+2.5
1,659,133	+				-0.7
1,659,133	+				+0.0
1,659,133	+				-1.5
1,659,133	+				-1.8
1,659,133	+				-0.3
1,659,134	-				-1.5
1,659,134	-				+0.5
1,659,134	-				-0.2
1,659,134	-				-1.0
1,659,134	-				+1.1
1,659,134	-				-0.5
1,659,145	-				+2.7
1,659,145	-				+1.4
1,659,177	+				-1.8
1,659,177	+				-1.5
1,659,177	+				+0.0
1,659,177	+				-1.8
1,659,177	+				-2.2
1,659,178	-				+1.7
1,659,178	-				-0.7
1,659,178	-				-1.6
1,659,178	-				+1.5
1,659,178	-				+2.1
1,659,178	-				+0.6
1,659,185	+				-1.3
1,659,185	+				+0.5
1,659,185	+				-1.8
1,659,185	+				+0.8
1,659,185	+				+0.0
1,659,185	+				-1.3
1,659,186	-				+2.4
1,659,186	-				-0.9
1,659,186	-				-0.1
1,659,186	-				-1.2
1,659,186	-				-1.6
1,659,186	-				+1.0
1,659,186	-				-0.5
1,659,188	+				-0.4
1,659,188	+				+1.7
1,659,188	+				+0.8
1,659,188	+				-1.0
1,659,188	+				+0.8
1,659,188	+				-1.0
1,659,188	+				-1.6
1,659,188	+				+0.8
1,659,188	+				-0.5
1,659,188	+				-2.0
1,659,188	+				+2.2
1,659,188	+				+1.5
1,659,188	+				-1.0
1,659,188	+				+3.5
1,659,188	+				+1.2
1,659,188	+				-2.1
1,659,189	-				-0.3
1,659,189	-				-1.5
1,659,189	-				-1.0
1,659,189	-				-0.9
1,659,189	-				-0.8
1,659,189	-				-1.9
1,659,189	-				-2.0
1,659,189	-				+1.4
1,659,189	-				-2.0
1,659,247	-				-0.7
1,659,406	+		AO353_07540	0.12	+0.6
1,659,407	-		AO353_07540	0.12	-0.3
1,659,407	-		AO353_07540	0.12	-1.0
1,659,589	+		AO353_07540	0.22	+0.1
1,659,589	+		AO353_07540	0.22	-0.9
1,659,589	+		AO353_07540	0.22	+0.6
1,659,589	+		AO353_07540	0.22	-1.3
1,659,589	+		AO353_07540	0.22	-0.6
1,659,589	+		AO353_07540	0.22	+0.7
1,659,589	+		AO353_07540	0.22	-1.3
1,659,589	+		AO353_07540	0.22	-0.2
1,659,590	-		AO353_07540	0.22	-2.2
1,659,590	-		AO353_07540	0.22	-0.3
1,659,590	-		AO353_07540	0.22	-0.0
1,659,590	-		AO353_07540	0.22	+1.3
1,659,590	-		AO353_07540	0.22	-0.2
1,659,590	-		AO353_07540	0.22	+0.7
1,659,590	-		AO353_07540	0.22	+0.9
1,659,590	-		AO353_07540	0.22	+1.5
1,659,598	+		AO353_07540	0.22	+1.5
1,659,598	+		AO353_07540	0.22	+0.1
1,659,598	+		AO353_07540	0.22	-1.5
1,659,599	-		AO353_07540	0.22	+0.2
1,659,599	-		AO353_07540	0.22	-1.6
1,659,599	-				+0.5
1,659,599	-		AO353_07540	0.22	-0.9
1,659,599	-		AO353_07540	0.22	+1.2
1,659,599	-		AO353_07540	0.22	-1.0
1,659,599	-		AO353_07540	0.22	-1.8
1,659,610	+		AO353_07540	0.23	+2.3
1,659,610	+		AO353_07540	0.23	-0.6
1,659,733	+		AO353_07540	0.29	-2.6
1,659,734	-		AO353_07540	0.29	-1.5
1,659,879	+		AO353_07540	0.37	-1.7
1,659,879	+		AO353_07540	0.37	+0.9
1,659,879	+		AO353_07540	0.37	-3.4
1,659,879	+		AO353_07540	0.37	+0.7
1,659,879	+		AO353_07540	0.37	-1.2
1,659,880	-		AO353_07540	0.37	+0.3
1,659,883	+		AO353_07540	0.37	+0.9
1,659,883	+		AO353_07540	0.37	-1.0
1,659,883	+		AO353_07540	0.37	-0.1
1,659,883	+		AO353_07540	0.37	+1.3
1,659,883	+		AO353_07540	0.37	+3.0
1,659,883	+		AO353_07540	0.37	+1.0
1,659,883	+		AO353_07540	0.37	-1.1
1,659,883	+		AO353_07540	0.37	-0.5
1,659,883	+		AO353_07540	0.37	+0.6
1,659,883	+		AO353_07540	0.37	-0.4
1,659,883	+		AO353_07540	0.37	+0.3
1,659,883	+		AO353_07540	0.37	+0.4
1,659,883	+		AO353_07540	0.37	-0.1
1,659,883	+		AO353_07540	0.37	-1.5
1,659,883	+		AO353_07540	0.37	+2.7
1,659,884	-		AO353_07540	0.37	+0.1
1,659,884	-		AO353_07540	0.37	+0.2
1,659,884	-		AO353_07540	0.37	-1.9
1,659,884	-		AO353_07540	0.37	+1.0
1,659,884	-		AO353_07540	0.37	+0.5
1,659,884	-		AO353_07540	0.37	-0.5
1,659,884	-		AO353_07540	0.37	-1.8
1,659,884	-		AO353_07540	0.37	+0.8
1,659,884	-		AO353_07540	0.37	+0.3
1,659,884	-		AO353_07540	0.37	-0.8
1,659,884	-		AO353_07540	0.37	+2.8
1,659,884	-		AO353_07540	0.37	+0.8
1,659,884	-		AO353_07540	0.37	-0.1
1,659,884	-		AO353_07540	0.37	+0.6
1,659,884	-		AO353_07540	0.37	-1.4
1,659,884	-		AO353_07540	0.37	-2.0
1,659,884	-		AO353_07540	0.37	-0.3