Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05920

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,314,204	+		AO353_05910	0.25	+2.4
1,314,204	+		AO353_05910	0.25	+2.6
1,314,204	+		AO353_05910	0.25	-0.9
1,314,204	+		AO353_05910	0.25	-1.8
1,314,205	-		AO353_05910	0.25	-0.8
1,314,205	-		AO353_05910	0.25	+1.5
1,314,205	-		AO353_05910	0.25	-0.7
1,314,205	-		AO353_05910	0.25	+0.9
1,314,205	-		AO353_05910	0.25	+1.1
1,314,291	+		AO353_05910	0.40	-1.5
1,314,291	+		AO353_05910	0.40	-1.1
1,314,291	+		AO353_05910	0.40	+0.5
1,314,291	+		AO353_05910	0.40	+0.3
1,314,291	+		AO353_05910	0.40	+2.1
1,314,291	+		AO353_05910	0.40	-0.4
1,314,291	+		AO353_05910	0.40	+2.8
1,314,291	+		AO353_05910	0.40	-0.5
1,314,291	+		AO353_05910	0.40	-0.8
1,314,291	+		AO353_05910	0.40	-1.0
1,314,291	+		AO353_05910	0.40	-0.4
1,314,291	+		AO353_05910	0.40	-2.2
1,314,291	+		AO353_05910	0.40	+3.6
1,314,291	+		AO353_05910	0.40	-0.2
1,314,292	-		AO353_05910	0.40	-0.8
1,314,292	-		AO353_05910	0.40	+2.9
1,314,292	-		AO353_05910	0.40	+2.9
1,314,324	+		AO353_05910	0.45	+0.6
1,314,325	-		AO353_05910	0.46	-0.3
1,314,367	-		AO353_05910	0.53	-1.0
1,314,367	-		AO353_05910	0.53	-2.2
1,314,405	+		AO353_05910	0.59	+0.1
1,314,405	+		AO353_05910	0.59	-0.9
1,314,405	+		AO353_05910	0.59	-1.7
1,314,406	-		AO353_05910	0.59	-1.2
1,314,453	+		AO353_05910	0.67	-2.4
1,314,505	-		AO353_05910	0.76	+1.5
1,314,632	+				-1.4
1,314,632	+				+0.1
1,314,632	+				-1.2
1,314,632	+				-1.6
1,314,632	+				-2.1
1,314,632	+				-1.7
1,314,632	+				+0.3
1,314,632	+				+0.7
1,314,633	-				-0.7
1,314,633	-				-2.3
1,314,633	-				-2.0
1,314,633	-				+1.5
1,314,633	-				-1.6
1,314,633	-				-0.8
1,314,633	-				-3.0
1,314,633	-				+0.8
1,314,633	-				+2.7
1,314,685	+				-1.3
1,314,685	+				+0.8
1,314,685	+				-1.1
1,314,686	-				+1.1
1,314,686	-				+0.2
1,314,686	-				-1.3
1,314,709	-				-0.4
1,314,709	-				+1.1
1,314,750	+				+0.3
1,314,750	+				+1.2
1,314,750	+				-1.2
1,314,750	+				+1.6
1,314,750	+				+2.6
1,314,750	+				-0.8
1,314,750	+				-0.5
1,314,750	+				-0.7
1,314,750	+				+0.5
1,314,750	+				-1.4
1,314,751	-				-1.2
1,314,751	-				+0.3
1,314,751	-				-0.1
1,314,751	-				-2.9
1,314,751	-				-0.4
1,314,813	+				-2.1
1,314,929	+		AO353_05915	0.26	+2.5
1,314,929	+		AO353_05915	0.26	+0.6
1,314,929	+		AO353_05915	0.26	+2.9
1,314,929	+		AO353_05915	0.26	-0.2
1,314,930	-		AO353_05915	0.26	-0.8
1,314,930	-		AO353_05915	0.26	+1.8
1,314,930	-		AO353_05915	0.26	-0.6
1,314,930	-		AO353_05915	0.26	-1.0
1,314,968	+		AO353_05915	0.38	-2.3
1,315,006	+		AO353_05915	0.50	+1.1
1,315,006	+		AO353_05915	0.50	+1.4
1,315,006	+		AO353_05915	0.50	+0.5
1,315,006	+		AO353_05915	0.50	+2.4
1,315,006	+		AO353_05915	0.50	+2.4
1,315,007	-		AO353_05915	0.50	+0.5
1,315,007	-		AO353_05915	0.50	+0.2
1,315,007	-		AO353_05915	0.50	+0.3
1,315,013	+		AO353_05915	0.52	-0.8
1,315,014	-		AO353_05915	0.53	+0.4
1,315,014	-		AO353_05915	0.53	-1.2
1,315,097	+		AO353_05915	0.79	+2.8
1,315,183	-				+0.4
1,315,183	-				-1.5
1,315,423	+		AO353_05920	0.35	+0.3
1,315,423	+		AO353_05920	0.35	+3.6
1,315,424	-		AO353_05920	0.36	+0.6
1,315,424	-		AO353_05920	0.36	+1.1
1,315,514	+		AO353_05920	0.47	-0.8
1,315,514	+		AO353_05920	0.47	-1.3
1,315,514	+		AO353_05920	0.47	-0.8
1,315,517	+		AO353_05920	0.48	+0.3
1,315,518	-		AO353_05920	0.48	-0.5
1,315,518	-		AO353_05920	0.48	-1.4
1,315,558	+		AO353_05920	0.53	-1.7
1,315,558	+		AO353_05920	0.53	-0.8
1,315,559	-		AO353_05920	0.53	+0.0
1,315,559	-		AO353_05920	0.53	-1.5
1,315,559	-		AO353_05920	0.53	+0.3
1,315,559	-		AO353_05920	0.53	-0.2
1,315,559	-		AO353_05920	0.53	+1.7
1,315,567	-		AO353_05920	0.54	+0.2
1,315,648	-		AO353_05920	0.65	+0.3
1,315,648	-		AO353_05920	0.65	-2.2
1,315,648	-		AO353_05920	0.65	-0.2
1,315,648	-		AO353_05920	0.65	-0.0
1,315,648	-		AO353_05920	0.65	+1.5
1,315,721	+		AO353_05920	0.74	-1.0
1,315,866	+				-0.2
1,315,894	+				+1.9
1,315,894	+				+0.4
1,315,895	-				+1.6
1,315,895	-				-0.2
1,315,895	-				-1.6
1,315,910	+				-2.1
1,315,910	+				-1.8
1,315,910	+				+1.0
1,315,910	+				+1.3
1,315,911	-				+1.3
1,315,911	-				+0.6
1,315,911	-				-0.7
1,315,959	+				+0.8
1,315,959	+				-0.7
1,315,959	+				-0.6
1,315,960	-				+1.4
1,315,960	-				-2.2
1,315,960	-				+0.2
1,315,960	-				-1.4
1,315,960	-				-0.8
1,315,961	+				+1.2
1,315,961	+				-0.7
1,315,961	+				-0.8
1,315,961	+				-0.8
1,315,961	+				-0.8
1,315,961	+				+0.5
1,315,962	-				+0.8
1,315,962	-				-1.5
1,315,962	-				-1.7
1,315,962	-				+1.1
1,315,962	-				-0.2
1,315,962	-				+0.4
1,316,034	+				+0.8
1,316,142	-		AO353_05925	0.15	-1.7
1,316,142	-		AO353_05925	0.15	+3.1
1,316,262	+		AO353_05925	0.29	-1.6
1,316,322	+		AO353_05925	0.35	-0.6
1,316,322	+		AO353_05925	0.35	+0.9
1,316,322	+		AO353_05925	0.35	-3.5
1,316,323	-		AO353_05925	0.35	+1.5
1,316,323	-		AO353_05925	0.35	+3.3
1,316,416	+		AO353_05925	0.46	-0.2
1,316,416	+		AO353_05925	0.46	+0.9
1,316,416	+		AO353_05925	0.46	+0.7
1,316,416	+		AO353_05925	0.46	-0.7
1,316,416	+		AO353_05925	0.46	-1.8
1,316,416	+		AO353_05925	0.46	+0.4
1,316,417	-		AO353_05925	0.46	+1.9
1,316,417	-		AO353_05925	0.46	-1.7
1,316,580	+		AO353_05925	0.64	+1.1
1,316,581	-		AO353_05925	0.64	-0.7
1,316,581	-		AO353_05925	0.64	-0.9
1,316,581	-		AO353_05925	0.64	-1.1
1,316,581	-		AO353_05925	0.64	+2.8
1,316,616	+		AO353_05925	0.68	-1.1
1,316,616	+		AO353_05925	0.68	-0.9
1,316,616	+		AO353_05925	0.68	+1.3
1,316,616	+		AO353_05925	0.68	+2.3
1,316,616	+		AO353_05925	0.68	-1.4
1,316,616	+		AO353_05925	0.68	+2.8
1,316,616	+		AO353_05925	0.68	-1.5
1,316,616	+		AO353_05925	0.68	+0.9
1,316,616	+		AO353_05925	0.68	+1.1
1,316,616	+		AO353_05925	0.68	-1.5
1,316,616	+		AO353_05925	0.68	-1.4
1,316,617	-		AO353_05925	0.68	+0.7
1,316,617	-		AO353_05925	0.68	+0.8
1,316,812	+		AO353_05925	0.90	+0.1
1,316,812	+		AO353_05925	0.90	+0.6
1,316,812	+		AO353_05925	0.90	-0.1
1,316,812	+		AO353_05925	0.90	-2.1
1,316,812	+		AO353_05925	0.90	-1.2
1,316,812	+		AO353_05925	0.90	-0.7
1,316,813	-		AO353_05925	0.90	-0.2
1,316,813	-		AO353_05925	0.90	+2.9
1,316,813	-		AO353_05925	0.90	-1.0
1,316,901	+				+0.7
1,316,901	+				+1.7
1,316,902	-				-0.7
1,316,902	-				-0.3