Experiment: Cadmium chloride hemipentahydrate 0.00005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_571 and Pf6N2E2_572 are separated by 184 nucleotides Pf6N2E2_572 and Pf6N2E2_573 are separated by 67 nucleotides
Pf6N2E2_571 - ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63), at 645,326 to 646,369
_571
Pf6N2E2_572 - hypothetical protein, at 646,554 to 647,033
_572
Pf6N2E2_573 - Potassium uptake protein TrkH, at 647,101 to 648,555
_573
Position (kb) 646
647
648 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 645.721 kb on - strand, within Pf6N2E2_571 at 645.725 kb on + strand, within Pf6N2E2_571 at 645.726 kb on - strand, within Pf6N2E2_571 at 645.726 kb on - strand, within Pf6N2E2_571 at 645.726 kb on - strand, within Pf6N2E2_571 at 645.726 kb on - strand, within Pf6N2E2_571 at 645.726 kb on - strand, within Pf6N2E2_571 at 646.015 kb on - strand, within Pf6N2E2_571 at 646.015 kb on - strand, within Pf6N2E2_571 at 646.015 kb on - strand, within Pf6N2E2_571 at 646.298 kb on - strand at 646.400 kb on + strand at 646.400 kb on + strand at 646.420 kb on + strand at 646.420 kb on + strand at 646.420 kb on + strand at 646.420 kb on + strand at 646.421 kb on - strand at 646.421 kb on - strand at 646.517 kb on - strand at 646.565 kb on + strand at 646.565 kb on + strand at 646.566 kb on - strand at 646.656 kb on + strand, within Pf6N2E2_572 at 646.656 kb on + strand, within Pf6N2E2_572 at 646.926 kb on - strand, within Pf6N2E2_572 at 646.973 kb on + strand, within Pf6N2E2_572 at 647.106 kb on - strand at 647.174 kb on - strand at 647.347 kb on - strand, within Pf6N2E2_573 at 647.347 kb on - strand, within Pf6N2E2_573 at 647.412 kb on - strand, within Pf6N2E2_573 at 647.467 kb on + strand, within Pf6N2E2_573 at 647.468 kb on - strand, within Pf6N2E2_573 at 647.480 kb on - strand, within Pf6N2E2_573 at 647.480 kb on - strand, within Pf6N2E2_573 at 647.546 kb on + strand, within Pf6N2E2_573 at 647.547 kb on - strand, within Pf6N2E2_573 at 647.547 kb on - strand, within Pf6N2E2_573 at 647.547 kb on - strand, within Pf6N2E2_573 at 647.579 kb on - strand, within Pf6N2E2_573 at 647.585 kb on + strand, within Pf6N2E2_573 at 647.585 kb on + strand, within Pf6N2E2_573 at 647.585 kb on + strand, within Pf6N2E2_573 at 647.586 kb on - strand, within Pf6N2E2_573 at 647.586 kb on - strand, within Pf6N2E2_573 at 647.790 kb on - strand, within Pf6N2E2_573 at 647.990 kb on + strand, within Pf6N2E2_573 at 647.990 kb on + strand, within Pf6N2E2_573 at 647.990 kb on + strand, within Pf6N2E2_573 at 647.990 kb on + strand, within Pf6N2E2_573 at 647.991 kb on - strand, within Pf6N2E2_573 at 647.991 kb on - strand, within Pf6N2E2_573 at 648.005 kb on + strand, within Pf6N2E2_573 at 648.005 kb on + strand, within Pf6N2E2_573 at 648.005 kb on + strand, within Pf6N2E2_573 at 648.005 kb on + strand, within Pf6N2E2_573 at 648.006 kb on - strand, within Pf6N2E2_573 at 648.006 kb on - strand, within Pf6N2E2_573 at 648.006 kb on - strand, within Pf6N2E2_573 at 648.006 kb on - strand, within Pf6N2E2_573 at 648.006 kb on - strand, within Pf6N2E2_573 at 648.006 kb on - strand, within Pf6N2E2_573
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium chloride hemipentahydrate 0.00005 M remove 645,721 - Pf6N2E2_571 0.38 +1.2 645,725 + Pf6N2E2_571 0.38 +0.5 645,726 - Pf6N2E2_571 0.38 +0.1 645,726 - Pf6N2E2_571 0.38 -0.1 645,726 - Pf6N2E2_571 0.38 -0.2 645,726 - Pf6N2E2_571 0.38 +0.5 645,726 - Pf6N2E2_571 0.38 -2.1 646,015 - Pf6N2E2_571 0.66 -1.9 646,015 - Pf6N2E2_571 0.66 +0.1 646,015 - Pf6N2E2_571 0.66 -0.6 646,298 - -0.4 646,400 + -0.6 646,400 + -1.0 646,420 + +1.2 646,420 + +0.4 646,420 + -0.0 646,420 + -0.5 646,421 - -0.7 646,421 - +0.4 646,517 - -3.1 646,565 + -0.4 646,565 + -0.3 646,566 - -0.9 646,656 + Pf6N2E2_572 0.21 +2.6 646,656 + Pf6N2E2_572 0.21 -1.9 646,926 - Pf6N2E2_572 0.78 -1.6 646,973 + Pf6N2E2_572 0.87 -0.3 647,106 - -0.3 647,174 - -1.0 647,347 - Pf6N2E2_573 0.17 -0.6 647,347 - Pf6N2E2_573 0.17 +1.0 647,412 - Pf6N2E2_573 0.21 +0.3 647,467 + Pf6N2E2_573 0.25 -1.0 647,468 - Pf6N2E2_573 0.25 +0.8 647,480 - Pf6N2E2_573 0.26 +0.4 647,480 - Pf6N2E2_573 0.26 -0.4 647,546 + Pf6N2E2_573 0.31 +0.3 647,547 - Pf6N2E2_573 0.31 -2.7 647,547 - Pf6N2E2_573 0.31 -0.4 647,547 - Pf6N2E2_573 0.31 -1.1 647,579 - Pf6N2E2_573 0.33 +0.2 647,585 + Pf6N2E2_573 0.33 -0.1 647,585 + Pf6N2E2_573 0.33 -0.2 647,585 + Pf6N2E2_573 0.33 -1.1 647,586 - Pf6N2E2_573 0.33 +0.1 647,586 - Pf6N2E2_573 0.33 -0.5 647,790 - Pf6N2E2_573 0.47 +1.1 647,990 + Pf6N2E2_573 0.61 -0.5 647,990 + Pf6N2E2_573 0.61 +0.2 647,990 + Pf6N2E2_573 0.61 -0.1 647,990 + Pf6N2E2_573 0.61 +0.7 647,991 - Pf6N2E2_573 0.61 +0.7 647,991 - Pf6N2E2_573 0.61 -0.1 648,005 + Pf6N2E2_573 0.62 -0.1 648,005 + Pf6N2E2_573 0.62 +0.3 648,005 + Pf6N2E2_573 0.62 -0.3 648,005 + Pf6N2E2_573 0.62 -0.9 648,006 - Pf6N2E2_573 0.62 -0.4 648,006 - Pf6N2E2_573 0.62 -0.7 648,006 - Pf6N2E2_573 0.62 -0.0 648,006 - Pf6N2E2_573 0.62 -1.0 648,006 - Pf6N2E2_573 0.62 +0.6 648,006 - Pf6N2E2_573 0.62 -0.5
Or see this region's nucleotide sequence