Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5141

Experiment: Cadmium chloride hemipentahydrate 0.00005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cadmium chloride hemipentahydrate 0.00005 M
5,923,396	-				-0.3
5,923,403	-				-1.2
5,923,403	-				+1.5
5,923,403	-				+0.2
5,923,424	-				-0.6
5,923,424	-				+0.6
5,923,424	-				+4.6
5,923,480	+				-0.2
5,923,532	+		Pf6N2E2_5140	0.15	-0.6
5,923,532	+				+1.3
5,923,533	-		Pf6N2E2_5140	0.15	+0.1
5,923,533	-		Pf6N2E2_5140	0.15	-0.4
5,924,002	+		Pf6N2E2_5140	0.69	-0.4
5,924,002	+		Pf6N2E2_5140	0.69	+0.6
5,924,003	-		Pf6N2E2_5140	0.69	-0.5
5,924,003	-		Pf6N2E2_5140	0.69	+0.9
5,924,243	-				+1.0
5,924,243	-				-0.2
5,924,306	+				-0.2
5,924,306	+				+0.4
5,924,306	+				+0.3
5,924,306	+				+0.6
5,924,307	-				+0.2
5,924,307	-				-0.5
5,924,307	-				-1.1
5,924,307	-				+0.7
5,924,307	-				+0.6
5,924,411	+		Pf6N2E2_5141	0.11	-1.6
5,924,412	-		Pf6N2E2_5141	0.11	-0.2
5,924,412	-		Pf6N2E2_5141	0.11	+0.1
5,924,412	-		Pf6N2E2_5141	0.11	-0.8
5,924,688	-		Pf6N2E2_5141	0.34	-0.3
5,924,688	-		Pf6N2E2_5141	0.34	+0.9
5,924,688	-		Pf6N2E2_5141	0.34	-0.2
5,924,688	-		Pf6N2E2_5141	0.34	+1.0
5,924,768	+		Pf6N2E2_5141	0.41	-0.0
5,924,972	+		Pf6N2E2_5141	0.57	-0.1
5,924,973	-		Pf6N2E2_5141	0.58	-0.8
5,925,023	+		Pf6N2E2_5141	0.62	-0.6
5,925,023	+		Pf6N2E2_5141	0.62	+1.0
5,925,023	+		Pf6N2E2_5141	0.62	-0.5
5,925,024	-		Pf6N2E2_5141	0.62	-0.2
5,925,092	+		Pf6N2E2_5141	0.67	-0.1
5,925,092	+		Pf6N2E2_5141	0.67	-0.5
5,925,092	+		Pf6N2E2_5141	0.67	-0.9
5,925,093	-		Pf6N2E2_5141	0.67	-0.9
5,925,107	+		Pf6N2E2_5141	0.69	+0.3
5,925,107	+		Pf6N2E2_5141	0.69	-0.2
5,925,107	+		Pf6N2E2_5141	0.69	-0.7
5,925,107	+		Pf6N2E2_5141	0.69	+0.1
5,925,303	+		Pf6N2E2_5141	0.85	-1.3
5,925,458	+				-0.0
5,925,458	+				-1.2
5,925,458	+				+0.3
5,925,458	+				-0.6
5,925,459	-				+0.6
5,925,459	-				-0.2
5,925,459	-				-0.3
5,925,459	-				+0.6
5,925,459	-				+2.0
5,925,671	-		Pf6N2E2_5142	0.11	-0.4
5,925,691	+		Pf6N2E2_5142	0.12	-0.2
5,925,727	+		Pf6N2E2_5142	0.14	+0.5
5,925,727	+		Pf6N2E2_5142	0.14	+0.3
5,925,727	+		Pf6N2E2_5142	0.14	-1.1
5,925,727	+		Pf6N2E2_5142	0.14	-0.6
5,925,727	+		Pf6N2E2_5142	0.14	-0.4
5,925,728	-		Pf6N2E2_5142	0.14	+0.3
5,925,728	-		Pf6N2E2_5142	0.14	+0.3
5,925,728	-		Pf6N2E2_5142	0.14	+0.3
5,925,728	-		Pf6N2E2_5142	0.14	+1.3
5,925,728	-		Pf6N2E2_5142	0.14	-0.3
5,926,170	-		Pf6N2E2_5142	0.40	+0.8
5,926,170	-		Pf6N2E2_5142	0.40	+1.1
5,926,183	+		Pf6N2E2_5142	0.41	-0.2
5,926,183	+		Pf6N2E2_5142	0.41	-0.6
5,926,183	+		Pf6N2E2_5142	0.41	-0.3
5,926,183	+		Pf6N2E2_5142	0.41	+1.0
5,926,261	+		Pf6N2E2_5142	0.45	-0.3
5,926,261	+		Pf6N2E2_5142	0.45	+0.2
5,926,261	+		Pf6N2E2_5142	0.45	-0.1
5,926,261	+		Pf6N2E2_5142	0.45	+0.5
5,926,261	+		Pf6N2E2_5142	0.45	-1.7
5,926,261	+		Pf6N2E2_5142	0.45	-0.4
5,926,261	+		Pf6N2E2_5142	0.45	+0.6
5,926,261	+		Pf6N2E2_5142	0.45	+0.6
5,926,261	+		Pf6N2E2_5142	0.45	+0.5
5,926,262	-		Pf6N2E2_5142	0.45	-1.0
5,926,262	-		Pf6N2E2_5142	0.45	+0.4
5,926,262	-		Pf6N2E2_5142	0.45	+0.3
5,926,262	-		Pf6N2E2_5142	0.45	-1.1
5,926,262	-		Pf6N2E2_5142	0.45	-0.4
5,926,262	-		Pf6N2E2_5142	0.45	-0.2
5,926,262	-		Pf6N2E2_5142	0.45	-0.3
5,926,262	-		Pf6N2E2_5142	0.45	+0.4
5,926,262	-		Pf6N2E2_5142	0.45	-0.6
5,926,262	-		Pf6N2E2_5142	0.45	-0.3
5,926,285	+		Pf6N2E2_5142	0.47	+0.4
5,926,451	+		Pf6N2E2_5142	0.56	-1.4
5,926,451	+		Pf6N2E2_5142	0.56	-0.1