Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1783
Experiment: Cadmium chloride hemipentahydrate 0.00005 M
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cadmium chloride hemipentahydrate 0.00005 M |
---|---|---|---|---|---|
remove | |||||
2,107,891 | - | Pf6N2E2_1781 | 0.78 | -0.6 | |
2,107,891 | - | Pf6N2E2_1781 | 0.78 | -1.6 | |
2,107,891 | - | Pf6N2E2_1781 | 0.78 | -0.2 | |
2,107,891 | - | Pf6N2E2_1781 | 0.78 | +0.4 | |
2,108,221 | - | +1.0 | |||
2,108,339 | - | +1.5 | |||
2,108,631 | + | Pf6N2E2_1782 | 0.81 | +0.2 | |
2,108,632 | - | Pf6N2E2_1782 | 0.81 | -0.8 | |
2,108,632 | - | Pf6N2E2_1782 | 0.81 | +0.2 | |
2,108,632 | - | Pf6N2E2_1782 | 0.81 | +1.5 | |
2,108,727 | - | -0.0 | |||
2,108,873 | + | Pf6N2E2_1783 | 0.40 | -1.4 | |
2,108,942 | - | Pf6N2E2_1783 | 0.59 | -0.5 | |
2,108,942 | - | Pf6N2E2_1783 | 0.59 | -0.8 | |
2,109,107 | - | -0.3 | |||
2,109,131 | + | +0.5 | |||
2,109,131 | + | +0.9 | |||
2,109,132 | - | +0.9 | |||
2,109,132 | - | -0.1 | |||
2,109,184 | + | +0.3 | |||
2,109,184 | + | +0.1 | |||
2,109,185 | - | -0.5 | |||
2,109,765 | + | Pf6N2E2_1784 | 0.59 | -0.8 | |
2,109,766 | - | Pf6N2E2_1784 | 0.59 | -0.0 | |
2,110,008 | + | Pf6N2E2_1784 | 0.81 | +0.3 |
Or see this region's nucleotide sequence