Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26190 and BWI76_RS26195 are separated by 52 nucleotides BWI76_RS26195 and BWI76_RS26200 are separated by 15 nucleotides
BWI76_RS26190: BWI76_RS26190 - glycerol-3-phosphate dehydrogenase, at 5,415,431 to 5,416,939
_RS26190
BWI76_RS26195: BWI76_RS26195 - glycogen phosphorylase, at 5,416,992 to 5,419,439
_RS26195
BWI76_RS26200: BWI76_RS26200 - starch synthase, at 5,419,455 to 5,420,888
_RS26200
Position (kb) 5416
5417
5418
5419
5420 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5416.162 kb on + strand, within BWI76_RS26190 at 5416.170 kb on - strand, within BWI76_RS26190 at 5416.363 kb on + strand, within BWI76_RS26190 at 5416.492 kb on + strand, within BWI76_RS26190 at 5416.511 kb on - strand, within BWI76_RS26190 at 5416.568 kb on - strand, within BWI76_RS26190 at 5416.871 kb on - strand at 5417.029 kb on + strand at 5417.116 kb on + strand at 5417.116 kb on + strand at 5417.335 kb on + strand, within BWI76_RS26195 at 5417.336 kb on + strand, within BWI76_RS26195 at 5417.413 kb on - strand, within BWI76_RS26195 at 5417.540 kb on + strand, within BWI76_RS26195 at 5417.570 kb on - strand, within BWI76_RS26195 at 5417.788 kb on + strand, within BWI76_RS26195 at 5417.856 kb on - strand, within BWI76_RS26195 at 5417.879 kb on + strand, within BWI76_RS26195 at 5417.946 kb on + strand, within BWI76_RS26195 at 5418.130 kb on - strand, within BWI76_RS26195 at 5418.133 kb on + strand, within BWI76_RS26195 at 5418.140 kb on + strand, within BWI76_RS26195 at 5418.148 kb on - strand, within BWI76_RS26195 at 5418.246 kb on + strand, within BWI76_RS26195 at 5418.359 kb on + strand, within BWI76_RS26195 at 5418.367 kb on - strand, within BWI76_RS26195 at 5418.367 kb on - strand, within BWI76_RS26195 at 5418.520 kb on + strand, within BWI76_RS26195 at 5418.538 kb on - strand, within BWI76_RS26195 at 5418.560 kb on - strand, within BWI76_RS26195 at 5418.560 kb on - strand, within BWI76_RS26195 at 5418.684 kb on + strand, within BWI76_RS26195 at 5418.738 kb on + strand, within BWI76_RS26195 at 5418.757 kb on - strand, within BWI76_RS26195 at 5419.143 kb on + strand, within BWI76_RS26195 at 5419.187 kb on + strand, within BWI76_RS26195 at 5419.195 kb on - strand at 5419.272 kb on + strand at 5419.304 kb on + strand at 5419.378 kb on + strand at 5419.408 kb on - strand at 5420.112 kb on - strand, within BWI76_RS26200 at 5420.273 kb on - strand, within BWI76_RS26200 at 5420.275 kb on + strand, within BWI76_RS26200 at 5420.280 kb on + strand, within BWI76_RS26200 at 5420.283 kb on - strand, within BWI76_RS26200
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 5,416,162 + BWI76_RS26190 0.48 -1.5 5,416,170 - BWI76_RS26190 0.49 -1.1 5,416,363 + BWI76_RS26190 0.62 -0.8 5,416,492 + BWI76_RS26190 0.70 -0.6 5,416,511 - BWI76_RS26190 0.72 -0.8 5,416,568 - BWI76_RS26190 0.75 +0.4 5,416,871 - -2.3 5,417,029 + +1.0 5,417,116 + +0.5 5,417,116 + +0.1 5,417,335 + BWI76_RS26195 0.14 +0.0 5,417,336 + BWI76_RS26195 0.14 -0.6 5,417,413 - BWI76_RS26195 0.17 -0.4 5,417,540 + BWI76_RS26195 0.22 -0.6 5,417,570 - BWI76_RS26195 0.24 -1.9 5,417,788 + BWI76_RS26195 0.33 -0.1 5,417,856 - BWI76_RS26195 0.35 -0.3 5,417,879 + BWI76_RS26195 0.36 -0.4 5,417,946 + BWI76_RS26195 0.39 -3.5 5,418,130 - BWI76_RS26195 0.46 -0.3 5,418,133 + BWI76_RS26195 0.47 -0.2 5,418,140 + BWI76_RS26195 0.47 +0.6 5,418,148 - BWI76_RS26195 0.47 -0.0 5,418,246 + BWI76_RS26195 0.51 -0.2 5,418,359 + BWI76_RS26195 0.56 +1.0 5,418,367 - BWI76_RS26195 0.56 +0.2 5,418,367 - BWI76_RS26195 0.56 +0.4 5,418,520 + BWI76_RS26195 0.62 +0.1 5,418,538 - BWI76_RS26195 0.63 +0.9 5,418,560 - BWI76_RS26195 0.64 -0.1 5,418,560 - BWI76_RS26195 0.64 -0.1 5,418,684 + BWI76_RS26195 0.69 +0.1 5,418,738 + BWI76_RS26195 0.71 -1.3 5,418,757 - BWI76_RS26195 0.72 +0.5 5,419,143 + BWI76_RS26195 0.88 -0.3 5,419,187 + BWI76_RS26195 0.90 -0.2 5,419,195 - -0.1 5,419,272 + -0.3 5,419,304 + +0.2 5,419,378 + -0.6 5,419,408 - +0.4 5,420,112 - BWI76_RS26200 0.46 -0.1 5,420,273 - BWI76_RS26200 0.57 +0.0 5,420,275 + BWI76_RS26200 0.57 +0.6 5,420,280 + BWI76_RS26200 0.58 -0.6 5,420,283 - BWI76_RS26200 0.58 +0.0
Or see this region's nucleotide sequence