Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26165 and BWI76_RS26170 are separated by 619 nucleotides BWI76_RS26170 and BWI76_RS26175 are separated by 168 nucleotides BWI76_RS26175 and BWI76_RS26180 are separated by 19 nucleotides
BWI76_RS26165: BWI76_RS26165 - Glycogen phosphorylase (EC 2.4.1.1) (from data) , at 5,407,337 to 5,409,727
_RS26165
BWI76_RS26170: BWI76_RS26170 - transcriptional regulator MalT, at 5,410,347 to 5,413,052
_RS26170
BWI76_RS26175: BWI76_RS26175 - DeoR/GlpR family transcriptional regulator, at 5,413,221 to 5,413,979
_RS26175
BWI76_RS26180: BWI76_RS26180 - rhomboid family intramembrane serine protease GlpG, at 5,413,999 to 5,414,829
_RS26180
Position (kb)
5410
5411
5412
5413
5414 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5409.392 kb on + strand, within BWI76_RS26165 at 5409.400 kb on - strand, within BWI76_RS26165 at 5409.424 kb on + strand, within BWI76_RS26165 at 5409.441 kb on - strand, within BWI76_RS26165 at 5409.469 kb on + strand, within BWI76_RS26165 at 5409.632 kb on - strand at 5409.642 kb on - strand at 5409.698 kb on - strand at 5409.758 kb on + strand at 5409.797 kb on + strand at 5409.804 kb on - strand at 5409.826 kb on - strand at 5409.840 kb on + strand at 5409.855 kb on + strand at 5409.863 kb on - strand at 5409.863 kb on - strand at 5409.917 kb on - strand at 5409.930 kb on - strand at 5409.931 kb on - strand at 5409.931 kb on - strand at 5409.956 kb on + strand at 5409.956 kb on - strand at 5410.035 kb on - strand at 5410.159 kb on - strand at 5410.159 kb on - strand at 5410.207 kb on - strand at 5410.207 kb on - strand at 5410.217 kb on + strand at 5410.269 kb on + strand at 5410.322 kb on + strand at 5410.322 kb on + strand at 5410.322 kb on + strand at 5410.322 kb on + strand at 5410.327 kb on + strand at 5410.330 kb on - strand at 5410.345 kb on - strand at 5410.347 kb on + strand at 5410.366 kb on - strand at 5410.366 kb on - strand at 5410.370 kb on - strand at 5410.371 kb on + strand at 5410.372 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.390 kb on + strand at 5410.390 kb on + strand at 5410.390 kb on + strand at 5410.390 kb on + strand at 5410.391 kb on + strand at 5410.391 kb on + strand at 5410.391 kb on + strand at 5410.391 kb on + strand at 5410.391 kb on + strand at 5410.399 kb on - strand at 5410.410 kb on - strand at 5410.436 kb on + strand at 5410.452 kb on + strand at 5410.452 kb on + strand at 5410.460 kb on - strand at 5410.470 kb on - strand at 5410.475 kb on + strand at 5410.538 kb on + strand at 5410.545 kb on + strand at 5410.560 kb on - strand at 5410.596 kb on - strand at 5410.737 kb on + strand, within BWI76_RS26170 at 5410.925 kb on + strand, within BWI76_RS26170 at 5411.008 kb on - strand, within BWI76_RS26170 at 5411.039 kb on + strand, within BWI76_RS26170 at 5411.126 kb on + strand, within BWI76_RS26170 at 5411.134 kb on - strand, within BWI76_RS26170 at 5411.403 kb on + strand, within BWI76_RS26170 at 5411.403 kb on + strand, within BWI76_RS26170 at 5411.403 kb on + strand, within BWI76_RS26170 at 5411.403 kb on + strand, within BWI76_RS26170 at 5411.411 kb on - strand, within BWI76_RS26170 at 5411.505 kb on - strand, within BWI76_RS26170 at 5411.505 kb on - strand, within BWI76_RS26170 at 5411.591 kb on + strand, within BWI76_RS26170 at 5411.599 kb on - strand, within BWI76_RS26170 at 5411.678 kb on - strand, within BWI76_RS26170 at 5411.718 kb on - strand, within BWI76_RS26170 at 5411.749 kb on - strand, within BWI76_RS26170 at 5411.826 kb on - strand, within BWI76_RS26170 at 5411.913 kb on + strand, within BWI76_RS26170 at 5411.921 kb on - strand, within BWI76_RS26170 at 5411.979 kb on - strand, within BWI76_RS26170 at 5412.055 kb on + strand, within BWI76_RS26170 at 5412.157 kb on + strand, within BWI76_RS26170 at 5412.554 kb on + strand, within BWI76_RS26170 at 5412.892 kb on - strand at 5413.077 kb on + strand at 5413.290 kb on + strand at 5413.290 kb on + strand at 5413.291 kb on + strand at 5413.300 kb on + strand, within BWI76_RS26175 at 5413.423 kb on - strand, within BWI76_RS26175 at 5413.439 kb on - strand, within BWI76_RS26175 at 5413.514 kb on - strand, within BWI76_RS26175 at 5413.786 kb on + strand, within BWI76_RS26175 at 5413.805 kb on - strand, within BWI76_RS26175
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 5,409,392 + BWI76_RS26165 0.86 -0.3 5,409,400 - BWI76_RS26165 0.86 +0.0 5,409,424 + BWI76_RS26165 0.87 -0.9 5,409,441 - BWI76_RS26165 0.88 +0.8 5,409,469 + BWI76_RS26165 0.89 -0.3 5,409,632 - -0.4 5,409,642 - -0.0 5,409,698 - +1.7 5,409,758 + -1.5 5,409,797 + +0.3 5,409,804 - +0.7 5,409,826 - -0.5 5,409,840 + +0.6 5,409,855 + +0.2 5,409,863 - +0.1 5,409,863 - -0.6 5,409,917 - +0.7 5,409,930 - -0.2 5,409,931 - -0.5 5,409,931 - +0.3 5,409,956 + -0.1 5,409,956 - -0.1 5,410,035 - +1.1 5,410,159 - -0.0 5,410,159 - +0.1 5,410,207 - +0.4 5,410,207 - +0.4 5,410,217 + -1.1 5,410,269 + -0.2 5,410,322 + +0.4 5,410,322 + +0.2 5,410,322 + +0.2 5,410,322 + -0.2 5,410,327 + -0.4 5,410,330 - -0.1 5,410,345 - +1.4 5,410,347 + +0.6 5,410,366 - +1.0 5,410,366 - -0.9 5,410,370 - +0.7 5,410,371 + +1.0 5,410,372 + -0.3 5,410,381 + -1.1 5,410,381 + +0.6 5,410,381 + +0.8 5,410,381 + -1.4 5,410,381 + -1.8 5,410,381 + -0.4 5,410,381 + -0.6 5,410,381 + +0.2 5,410,381 + -0.7 5,410,381 + -1.1 5,410,381 + +0.4 5,410,381 + -0.6 5,410,381 + -0.1 5,410,381 + +0.5 5,410,381 + -0.7 5,410,381 + +0.2 5,410,381 + -0.4 5,410,381 + +0.2 5,410,381 + -2.2 5,410,381 + +0.1 5,410,381 + -0.2 5,410,381 + +0.3 5,410,381 + +0.7 5,410,381 + -1.7 5,410,381 + -0.3 5,410,381 + +0.4 5,410,381 + +0.8 5,410,381 + -0.4 5,410,381 + +0.3 5,410,381 + +0.6 5,410,381 + -0.1 5,410,381 + -0.2 5,410,381 + -0.3 5,410,381 + +1.7 5,410,381 + -0.8 5,410,381 + -1.0 5,410,381 + +0.6 5,410,381 + +0.4 5,410,381 + +0.2 5,410,389 - +0.0 5,410,389 - +1.0 5,410,389 - -0.1 5,410,389 - +1.2 5,410,389 - +2.2 5,410,389 - +2.0 5,410,389 - -2.4 5,410,389 - +0.2 5,410,389 - +1.7 5,410,389 - -1.9 5,410,389 - +0.4 5,410,389 - +0.4 5,410,389 - -0.1 5,410,389 - +0.2 5,410,389 - +0.0 5,410,389 - -1.8 5,410,389 - +0.4 5,410,389 - +0.7 5,410,389 - +0.7 5,410,389 - +0.3 5,410,389 - +0.7 5,410,389 - +0.2 5,410,389 - +0.1 5,410,389 - +0.1 5,410,389 - +0.8 5,410,389 - +1.3 5,410,389 - +0.6 5,410,389 - -0.8 5,410,389 - +1.3 5,410,389 - +0.5 5,410,389 - -0.3 5,410,389 - +0.5 5,410,389 - -0.2 5,410,389 - +0.2 5,410,389 - +0.2 5,410,389 - -0.5 5,410,389 - +1.7 5,410,389 - +0.1 5,410,389 - +0.0 5,410,389 - -0.7 5,410,389 - +0.2 5,410,389 - -0.3 5,410,389 - +0.8 5,410,390 + -1.6 5,410,390 + +1.7 5,410,390 + -0.3 5,410,390 + -0.2 5,410,391 + +0.4 5,410,391 + -2.9 5,410,391 + +0.2 5,410,391 + -0.2 5,410,391 + +0.2 5,410,399 - +0.4 5,410,410 - +0.1 5,410,436 + -1.4 5,410,452 + -0.4 5,410,452 + +0.5 5,410,460 - +1.0 5,410,470 - -0.2 5,410,475 + +1.7 5,410,538 + -0.5 5,410,545 + +1.1 5,410,560 - +0.4 5,410,596 - -0.3 5,410,737 + BWI76_RS26170 0.14 -0.1 5,410,925 + BWI76_RS26170 0.21 -1.2 5,411,008 - BWI76_RS26170 0.24 -2.1 5,411,039 + BWI76_RS26170 0.26 -0.6 5,411,126 + BWI76_RS26170 0.29 +1.0 5,411,134 - BWI76_RS26170 0.29 -0.2 5,411,403 + BWI76_RS26170 0.39 +0.1 5,411,403 + BWI76_RS26170 0.39 +0.7 5,411,403 + BWI76_RS26170 0.39 +0.7 5,411,403 + BWI76_RS26170 0.39 -0.0 5,411,411 - BWI76_RS26170 0.39 +0.2 5,411,505 - BWI76_RS26170 0.43 -0.3 5,411,505 - BWI76_RS26170 0.43 +1.3 5,411,591 + BWI76_RS26170 0.46 +1.4 5,411,599 - BWI76_RS26170 0.46 +0.7 5,411,678 - BWI76_RS26170 0.49 +3.0 5,411,718 - BWI76_RS26170 0.51 +1.1 5,411,749 - BWI76_RS26170 0.52 +0.8 5,411,826 - BWI76_RS26170 0.55 +0.0 5,411,913 + BWI76_RS26170 0.58 -0.1 5,411,921 - BWI76_RS26170 0.58 +0.0 5,411,979 - BWI76_RS26170 0.60 +0.1 5,412,055 + BWI76_RS26170 0.63 +1.3 5,412,157 + BWI76_RS26170 0.67 -0.2 5,412,554 + BWI76_RS26170 0.82 -0.4 5,412,892 - +0.4 5,413,077 + +2.4 5,413,290 + -0.6 5,413,290 + +2.7 5,413,291 + -0.8 5,413,300 + BWI76_RS26175 0.10 -0.2 5,413,423 - BWI76_RS26175 0.27 -0.8 5,413,439 - BWI76_RS26175 0.29 -0.6 5,413,514 - BWI76_RS26175 0.39 +0.1 5,413,786 + BWI76_RS26175 0.74 -1.2 5,413,805 - BWI76_RS26175 0.77 -0.3
Or see this region's nucleotide sequence