Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25345 and BWI76_RS25350 are separated by 15 nucleotides BWI76_RS25350 and BWI76_RS25355 are separated by 219 nucleotides BWI76_RS25355 and BWI76_RS25360 are separated by 190 nucleotides BWI76_RS25360 and BWI76_RS25365 are separated by 172 nucleotides
BWI76_RS25345: BWI76_RS25345 - 30S ribosomal protein S9, at 5,268,978 to 5,269,370
_RS25345
BWI76_RS25350: BWI76_RS25350 - 50S ribosomal protein L13, at 5,269,386 to 5,269,814
_RS25350
BWI76_RS25355: BWI76_RS25355 - cell division protein ZapE, at 5,270,034 to 5,271,167
_RS25355
BWI76_RS25360: BWI76_RS25360 - hypothetical protein, at 5,271,358 to 5,271,756
_RS25360
BWI76_RS25365: BWI76_RS25365 - serine endoprotease DegQ, at 5,271,929 to 5,273,296
_RS25365
Position (kb)
5270
5271
5272 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5269.977 kb on + strand at 5270.031 kb on + strand at 5270.186 kb on + strand, within BWI76_RS25355 at 5270.294 kb on + strand, within BWI76_RS25355 at 5270.490 kb on + strand, within BWI76_RS25355 at 5270.654 kb on + strand, within BWI76_RS25355 at 5270.654 kb on + strand, within BWI76_RS25355 at 5270.807 kb on - strand, within BWI76_RS25355 at 5270.817 kb on + strand, within BWI76_RS25355 at 5270.942 kb on - strand, within BWI76_RS25355 at 5270.942 kb on - strand, within BWI76_RS25355 at 5271.148 kb on + strand at 5271.200 kb on - strand at 5271.230 kb on + strand at 5271.238 kb on - strand at 5271.811 kb on + strand at 5271.853 kb on - strand at 5271.916 kb on - strand at 5271.962 kb on + strand at 5271.969 kb on + strand at 5272.107 kb on - strand, within BWI76_RS25365
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 5,269,977 + -0.0 5,270,031 + +3.1 5,270,186 + BWI76_RS25355 0.13 -0.9 5,270,294 + BWI76_RS25355 0.23 -1.6 5,270,490 + BWI76_RS25355 0.40 -2.4 5,270,654 + BWI76_RS25355 0.55 -2.2 5,270,654 + BWI76_RS25355 0.55 -2.4 5,270,807 - BWI76_RS25355 0.68 -1.8 5,270,817 + BWI76_RS25355 0.69 -2.4 5,270,942 - BWI76_RS25355 0.80 -3.2 5,270,942 - BWI76_RS25355 0.80 -1.3 5,271,148 + -1.5 5,271,200 - +1.1 5,271,230 + -0.3 5,271,238 - +0.1 5,271,811 + -0.7 5,271,853 - +0.2 5,271,916 - -1.0 5,271,962 + +0.1 5,271,969 + -0.3 5,272,107 - BWI76_RS25365 0.13 +0.3
Or see this region's nucleotide sequence