Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25305 and BWI76_RS25310 are separated by 60 nucleotides BWI76_RS25310 and BWI76_RS25315 are separated by 415 nucleotides BWI76_RS25315 and BWI76_RS25320 are separated by 9 nucleotides
BWI76_RS25305: BWI76_RS25305 - TIGR01212 family radical SAM protein, at 5,259,459 to 5,260,394
_RS25305
BWI76_RS25310: BWI76_RS25310 - hypothetical protein, at 5,260,455 to 5,260,652
_RS25310
BWI76_RS25315: BWI76_RS25315 - glutamate synthase large subunit, at 5,261,068 to 5,265,528
_RS25315
BWI76_RS25320: BWI76_RS25320 - glutamate synthase, at 5,265,538 to 5,266,956
_RS25320
Position (kb) 5261
5262
5263
5264
5265
5266 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 5260.709 kb on - strand at 5260.709 kb on - strand at 5260.716 kb on + strand at 5260.718 kb on - strand at 5260.824 kb on - strand at 5260.855 kb on + strand at 5260.866 kb on + strand at 5260.981 kb on + strand at 5260.995 kb on + strand at 5261.038 kb on + strand at 5261.042 kb on + strand at 5261.047 kb on + strand at 5261.085 kb on - strand at 5261.161 kb on + strand at 5261.183 kb on - strand at 5261.469 kb on + strand at 5261.742 kb on - strand, within BWI76_RS25315 at 5261.763 kb on + strand, within BWI76_RS25315 at 5262.061 kb on - strand, within BWI76_RS25315 at 5262.079 kb on - strand, within BWI76_RS25315 at 5262.109 kb on + strand, within BWI76_RS25315 at 5262.283 kb on + strand, within BWI76_RS25315 at 5262.702 kb on - strand, within BWI76_RS25315 at 5262.809 kb on + strand, within BWI76_RS25315 at 5262.905 kb on + strand, within BWI76_RS25315 at 5262.967 kb on + strand, within BWI76_RS25315 at 5262.970 kb on - strand, within BWI76_RS25315 at 5263.082 kb on + strand, within BWI76_RS25315 at 5263.416 kb on + strand, within BWI76_RS25315 at 5263.416 kb on + strand, within BWI76_RS25315 at 5263.940 kb on + strand, within BWI76_RS25315 at 5263.940 kb on + strand, within BWI76_RS25315 at 5264.107 kb on + strand, within BWI76_RS25315 at 5264.222 kb on - strand, within BWI76_RS25315 at 5264.327 kb on - strand, within BWI76_RS25315 at 5264.380 kb on - strand, within BWI76_RS25315 at 5264.659 kb on + strand, within BWI76_RS25315 at 5264.672 kb on - strand, within BWI76_RS25315 at 5264.763 kb on - strand, within BWI76_RS25315 at 5264.768 kb on + strand, within BWI76_RS25315 at 5264.919 kb on - strand, within BWI76_RS25315 at 5265.056 kb on - strand, within BWI76_RS25315 at 5265.502 kb on + strand at 5265.748 kb on - strand, within BWI76_RS25320 at 5265.967 kb on - strand, within BWI76_RS25320 at 5266.009 kb on + strand, within BWI76_RS25320 at 5266.228 kb on + strand, within BWI76_RS25320 at 5266.268 kb on - strand, within BWI76_RS25320 at 5266.308 kb on + strand, within BWI76_RS25320 at 5266.432 kb on + strand, within BWI76_RS25320 at 5266.432 kb on + strand, within BWI76_RS25320
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 5,260,709 - +0.1 5,260,709 - +0.1 5,260,716 + -0.7 5,260,718 - -1.0 5,260,824 - +0.0 5,260,855 + -1.3 5,260,866 + -0.2 5,260,981 + +0.0 5,260,995 + -0.4 5,261,038 + -0.5 5,261,042 + -0.6 5,261,047 + -0.7 5,261,085 - -3.7 5,261,161 + -1.0 5,261,183 - -3.0 5,261,469 + -2.4 5,261,742 - BWI76_RS25315 0.15 -2.0 5,261,763 + BWI76_RS25315 0.16 -5.0 5,262,061 - BWI76_RS25315 0.22 -1.3 5,262,079 - BWI76_RS25315 0.23 -1.2 5,262,109 + BWI76_RS25315 0.23 -1.9 5,262,283 + BWI76_RS25315 0.27 -1.9 5,262,702 - BWI76_RS25315 0.37 -1.2 5,262,809 + BWI76_RS25315 0.39 -2.4 5,262,905 + BWI76_RS25315 0.41 -2.5 5,262,967 + BWI76_RS25315 0.43 +1.2 5,262,970 - BWI76_RS25315 0.43 -1.9 5,263,082 + BWI76_RS25315 0.45 -1.3 5,263,416 + BWI76_RS25315 0.53 -2.6 5,263,416 + BWI76_RS25315 0.53 -1.1 5,263,940 + BWI76_RS25315 0.64 -1.1 5,263,940 + BWI76_RS25315 0.64 -1.3 5,264,107 + BWI76_RS25315 0.68 -1.5 5,264,222 - BWI76_RS25315 0.71 -1.6 5,264,327 - BWI76_RS25315 0.73 -0.4 5,264,380 - BWI76_RS25315 0.74 -1.4 5,264,659 + BWI76_RS25315 0.80 -2.0 5,264,672 - BWI76_RS25315 0.81 -2.2 5,264,763 - BWI76_RS25315 0.83 +0.1 5,264,768 + BWI76_RS25315 0.83 -2.3 5,264,919 - BWI76_RS25315 0.86 -1.7 5,265,056 - BWI76_RS25315 0.89 +0.4 5,265,502 + +3.7 5,265,748 - BWI76_RS25320 0.15 -3.1 5,265,967 - BWI76_RS25320 0.30 -1.2 5,266,009 + BWI76_RS25320 0.33 -1.8 5,266,228 + BWI76_RS25320 0.49 -1.9 5,266,268 - BWI76_RS25320 0.51 -0.8 5,266,308 + BWI76_RS25320 0.54 -1.9 5,266,432 + BWI76_RS25320 0.63 -2.3 5,266,432 + BWI76_RS25320 0.63 -2.1
Or see this region's nucleotide sequence