Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22385 and BWI76_RS22390 are separated by 12 nucleotides BWI76_RS22390 and BWI76_RS22395 are separated by 223 nucleotides
BWI76_RS22385: BWI76_RS22385 - beta-1,4 mannanase, at 4,666,635 to 4,668,830
_RS22385
BWI76_RS22390: BWI76_RS22390 - maltoporin, at 4,668,843 to 4,670,186
_RS22390
BWI76_RS22395: BWI76_RS22395 - hypothetical protein, at 4,670,410 to 4,671,681
_RS22395
Position (kb)
4668
4669
4670
4671 Strain fitness (log2 ratio)
-2
-1
0
1 at 4667.950 kb on + strand, within BWI76_RS22385 at 4668.212 kb on - strand, within BWI76_RS22385 at 4668.212 kb on - strand, within BWI76_RS22385 at 4668.241 kb on - strand, within BWI76_RS22385 at 4668.241 kb on - strand, within BWI76_RS22385 at 4668.545 kb on - strand, within BWI76_RS22385 at 4668.667 kb on - strand at 4668.692 kb on - strand at 4669.043 kb on - strand, within BWI76_RS22390 at 4669.323 kb on + strand, within BWI76_RS22390 at 4669.331 kb on - strand, within BWI76_RS22390 at 4669.340 kb on + strand, within BWI76_RS22390 at 4669.341 kb on - strand, within BWI76_RS22390 at 4669.540 kb on - strand, within BWI76_RS22390 at 4669.546 kb on - strand, within BWI76_RS22390 at 4669.587 kb on + strand, within BWI76_RS22390 at 4669.751 kb on + strand, within BWI76_RS22390 at 4669.756 kb on - strand, within BWI76_RS22390 at 4670.017 kb on + strand, within BWI76_RS22390 at 4670.079 kb on + strand at 4670.343 kb on + strand at 4670.409 kb on - strand at 4670.755 kb on - strand, within BWI76_RS22395 at 4670.760 kb on + strand, within BWI76_RS22395 at 4670.765 kb on + strand, within BWI76_RS22395 at 4671.060 kb on - strand, within BWI76_RS22395
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 4,667,950 + BWI76_RS22385 0.60 +1.0 4,668,212 - BWI76_RS22385 0.72 -1.0 4,668,212 - BWI76_RS22385 0.72 -0.3 4,668,241 - BWI76_RS22385 0.73 -0.0 4,668,241 - BWI76_RS22385 0.73 +1.7 4,668,545 - BWI76_RS22385 0.87 +0.2 4,668,667 - +0.2 4,668,692 - -0.3 4,669,043 - BWI76_RS22390 0.15 -0.1 4,669,323 + BWI76_RS22390 0.36 -1.9 4,669,331 - BWI76_RS22390 0.36 -0.1 4,669,340 + BWI76_RS22390 0.37 -0.3 4,669,341 - BWI76_RS22390 0.37 -0.3 4,669,540 - BWI76_RS22390 0.52 -0.3 4,669,546 - BWI76_RS22390 0.52 +0.1 4,669,587 + BWI76_RS22390 0.55 -0.8 4,669,751 + BWI76_RS22390 0.68 -0.3 4,669,756 - BWI76_RS22390 0.68 -0.1 4,670,017 + BWI76_RS22390 0.87 +0.3 4,670,079 + -0.9 4,670,343 + +0.6 4,670,409 - -0.3 4,670,755 - BWI76_RS22395 0.27 -0.3 4,670,760 + BWI76_RS22395 0.28 +0.6 4,670,765 + BWI76_RS22395 0.28 +0.1 4,671,060 - BWI76_RS22395 0.51 +0.3
Or see this region's nucleotide sequence