Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16285 and BWI76_RS16290 are separated by 25 nucleotides BWI76_RS16290 and BWI76_RS16295 are separated by 174 nucleotides
BWI76_RS16285: BWI76_RS16285 - hypothetical protein, at 3,379,804 to 3,381,309
_RS16285
BWI76_RS16290: BWI76_RS16290 - Mal regulon transcriptional regulator MalI, at 3,381,335 to 3,382,363
_RS16290
BWI76_RS16295: BWI76_RS16295 - bifunctional PTS system maltose and glucose-specific transporter subunits IICB, at 3,382,538 to 3,384,130
_RS16295
Position (kb)
3381
3382
3383 Strain fitness (log2 ratio)
-1
0
1 at 3380.562 kb on + strand, within BWI76_RS16285 at 3380.622 kb on - strand, within BWI76_RS16285 at 3380.837 kb on - strand, within BWI76_RS16285 at 3380.850 kb on + strand, within BWI76_RS16285 at 3381.054 kb on - strand, within BWI76_RS16285 at 3381.077 kb on - strand, within BWI76_RS16285 at 3381.426 kb on - strand at 3381.444 kb on - strand, within BWI76_RS16290 at 3381.494 kb on - strand, within BWI76_RS16290 at 3381.580 kb on + strand, within BWI76_RS16290 at 3382.293 kb on - strand at 3382.358 kb on + strand at 3382.599 kb on + strand at 3382.606 kb on - strand at 3382.624 kb on - strand at 3382.666 kb on - strand at 3382.721 kb on + strand, within BWI76_RS16295 at 3382.932 kb on - strand, within BWI76_RS16295 at 3383.087 kb on - strand, within BWI76_RS16295 at 3383.188 kb on - strand, within BWI76_RS16295 at 3383.362 kb on - strand, within BWI76_RS16295
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 3,380,562 + BWI76_RS16285 0.50 -0.7 3,380,622 - BWI76_RS16285 0.54 +0.4 3,380,837 - BWI76_RS16285 0.69 +0.2 3,380,850 + BWI76_RS16285 0.69 -0.2 3,381,054 - BWI76_RS16285 0.83 +0.4 3,381,077 - BWI76_RS16285 0.85 +0.1 3,381,426 - -0.3 3,381,444 - BWI76_RS16290 0.11 +1.0 3,381,494 - BWI76_RS16290 0.15 -0.0 3,381,580 + BWI76_RS16290 0.24 +1.4 3,382,293 - -1.0 3,382,358 + -0.7 3,382,599 + +0.5 3,382,606 - +0.2 3,382,624 - +0.5 3,382,666 - +0.7 3,382,721 + BWI76_RS16295 0.11 +0.6 3,382,932 - BWI76_RS16295 0.25 +0.6 3,383,087 - BWI76_RS16295 0.34 +0.2 3,383,188 - BWI76_RS16295 0.41 +0.3 3,383,362 - BWI76_RS16295 0.52 +1.2
Or see this region's nucleotide sequence