Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05515 and BWI76_RS05520 are separated by 2 nucleotides BWI76_RS05520 and BWI76_RS05525 are separated by 32 nucleotides BWI76_RS05525 and BWI76_RS05530 are separated by 159 nucleotides
BWI76_RS05515: BWI76_RS05515 - NADH:ubiquinone reductase (Na(+)-transporting) subunit F, at 1,156,452 to 1,157,675
_RS05515
BWI76_RS05520: BWI76_RS05520 - hypothetical protein, at 1,157,678 to 1,157,893
_RS05520
BWI76_RS05525: BWI76_RS05525 - glycerophosphodiester phosphodiesterase, at 1,157,926 to 1,158,783
_RS05525
BWI76_RS05530: BWI76_RS05530 - DNA polymerase IV, at 1,158,943 to 1,159,998
_RS05530
Position (kb)
1157
1158
1159 Strain fitness (log2 ratio)
-2
-1
0
1 at 1157.126 kb on - strand, within BWI76_RS05515 at 1157.340 kb on + strand, within BWI76_RS05515 at 1157.773 kb on - strand, within BWI76_RS05520 at 1157.809 kb on + strand, within BWI76_RS05520 at 1157.820 kb on + strand, within BWI76_RS05520 at 1157.820 kb on + strand, within BWI76_RS05520 at 1157.828 kb on - strand, within BWI76_RS05520 at 1158.058 kb on + strand, within BWI76_RS05525 at 1158.058 kb on + strand, within BWI76_RS05525 at 1158.329 kb on - strand, within BWI76_RS05525 at 1158.330 kb on - strand, within BWI76_RS05525 at 1158.542 kb on - strand, within BWI76_RS05525 at 1158.945 kb on + strand at 1158.964 kb on + strand at 1158.964 kb on + strand at 1159.004 kb on + strand at 1159.004 kb on + strand at 1159.004 kb on + strand at 1159.051 kb on - strand, within BWI76_RS05530 at 1159.164 kb on - strand, within BWI76_RS05530 at 1159.410 kb on - strand, within BWI76_RS05530 at 1159.482 kb on + strand, within BWI76_RS05530 at 1159.523 kb on - strand, within BWI76_RS05530 at 1159.528 kb on + strand, within BWI76_RS05530 at 1159.549 kb on + strand, within BWI76_RS05530
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 1,157,126 - BWI76_RS05515 0.55 +0.3 1,157,340 + BWI76_RS05515 0.73 -0.3 1,157,773 - BWI76_RS05520 0.44 -0.6 1,157,809 + BWI76_RS05520 0.61 +0.3 1,157,820 + BWI76_RS05520 0.66 -1.0 1,157,820 + BWI76_RS05520 0.66 +0.2 1,157,828 - BWI76_RS05520 0.69 -0.1 1,158,058 + BWI76_RS05525 0.15 -0.6 1,158,058 + BWI76_RS05525 0.15 -1.6 1,158,329 - BWI76_RS05525 0.47 -2.5 1,158,330 - BWI76_RS05525 0.47 -0.4 1,158,542 - BWI76_RS05525 0.72 -1.4 1,158,945 + +0.2 1,158,964 + -1.1 1,158,964 + -0.8 1,159,004 + -0.2 1,159,004 + -0.2 1,159,004 + +0.6 1,159,051 - BWI76_RS05530 0.10 +0.3 1,159,164 - BWI76_RS05530 0.21 -0.0 1,159,410 - BWI76_RS05530 0.44 -0.7 1,159,482 + BWI76_RS05530 0.51 +0.0 1,159,523 - BWI76_RS05530 0.55 -1.3 1,159,528 + BWI76_RS05530 0.55 -0.3 1,159,549 + BWI76_RS05530 0.57 -0.0
Or see this region's nucleotide sequence