Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03410 and BWI76_RS03415 are separated by 195 nucleotides BWI76_RS03415 and BWI76_RS03420 are separated by 136 nucleotides BWI76_RS03420 and BWI76_RS03425 overlap by 14 nucleotides
BWI76_RS03410: BWI76_RS03410 - hypothetical protein, at 701,825 to 702,856
_RS03410
BWI76_RS03415: BWI76_RS03415 - LacI family transcriptional regulator, at 703,052 to 704,080
_RS03415
BWI76_RS03420: BWI76_RS03420 - hypothetical protein, at 704,217 to 704,648
_RS03420
BWI76_RS03425: BWI76_RS03425 - dihydrodipicolinate synthase family protein, at 704,635 to 705,546
_RS03425
Position (kb) 703
704
705 Strain fitness (log2 ratio) -2
-1
0
1 at 702.300 kb on + strand, within BWI76_RS03410 at 702.484 kb on + strand, within BWI76_RS03410 at 702.484 kb on + strand, within BWI76_RS03410 at 702.489 kb on + strand, within BWI76_RS03410 at 702.499 kb on + strand, within BWI76_RS03410 at 702.553 kb on + strand, within BWI76_RS03410 at 702.568 kb on - strand, within BWI76_RS03410 at 702.590 kb on + strand, within BWI76_RS03410 at 702.626 kb on - strand, within BWI76_RS03410 at 702.630 kb on + strand, within BWI76_RS03410 at 702.696 kb on + strand, within BWI76_RS03410 at 702.887 kb on + strand at 703.268 kb on - strand, within BWI76_RS03415 at 703.326 kb on - strand, within BWI76_RS03415 at 703.531 kb on - strand, within BWI76_RS03415 at 703.805 kb on + strand, within BWI76_RS03415 at 703.953 kb on + strand, within BWI76_RS03415 at 704.006 kb on - strand at 704.034 kb on + strand at 704.042 kb on - strand at 704.208 kb on - strand at 704.243 kb on - strand at 704.626 kb on - strand at 704.626 kb on - strand at 704.673 kb on + strand at 704.862 kb on + strand, within BWI76_RS03425 at 704.912 kb on - strand, within BWI76_RS03425 at 705.065 kb on + strand, within BWI76_RS03425
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 702,300 + BWI76_RS03410 0.46 -0.9 702,484 + BWI76_RS03410 0.64 -0.0 702,484 + BWI76_RS03410 0.64 +0.1 702,489 + BWI76_RS03410 0.64 -0.2 702,499 + BWI76_RS03410 0.65 +0.3 702,553 + BWI76_RS03410 0.71 -0.2 702,568 - BWI76_RS03410 0.72 -1.6 702,590 + BWI76_RS03410 0.74 -0.8 702,626 - BWI76_RS03410 0.78 +0.4 702,630 + BWI76_RS03410 0.78 -1.4 702,696 + BWI76_RS03410 0.84 -0.1 702,887 + +0.4 703,268 - BWI76_RS03415 0.21 -2.3 703,326 - BWI76_RS03415 0.27 -1.8 703,531 - BWI76_RS03415 0.47 -1.2 703,805 + BWI76_RS03415 0.73 -0.7 703,953 + BWI76_RS03415 0.88 -1.7 704,006 - -0.6 704,034 + -0.8 704,042 - +0.2 704,208 - -0.2 704,243 - +0.1 704,626 - +0.2 704,626 - -0.3 704,673 + -0.4 704,862 + BWI76_RS03425 0.25 -0.0 704,912 - BWI76_RS03425 0.30 -0.1 705,065 + BWI76_RS03425 0.47 -0.3
Or see this region's nucleotide sequence