Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01825 and BWI76_RS01830 are separated by 187 nucleotides BWI76_RS01830 and BWI76_RS01835 are separated by 27 nucleotides BWI76_RS01835 and BWI76_RS01840 are separated by 55 nucleotides
BWI76_RS01825: BWI76_RS01825 - maltose ABC transporter, permease component 1 (MalF) <small>(from data)</small>, at 371,567 to 373,111
_RS01825
BWI76_RS01830: BWI76_RS01830 - maltose ABC transporter, substrate-binding component MalE <small>(from data)</small>, at 373,299 to 374,489
_RS01830
BWI76_RS01835: BWI76_RS01835 - chemotaxis protein CheW, at 374,517 to 374,804
_RS01835
BWI76_RS01840: BWI76_RS01840 - maltose ABC transporter, ATPase component (MalK) <small>(from data)</small>, at 374,860 to 375,969
_RS01840
Position (kb) 373
374
375 Strain fitness (log2 ratio) -1
0
1
2
3 at 372.349 kb on + strand, within BWI76_RS01825 at 372.361 kb on + strand, within BWI76_RS01825 at 372.452 kb on + strand, within BWI76_RS01825 at 372.661 kb on + strand, within BWI76_RS01825 at 372.833 kb on - strand, within BWI76_RS01825 at 372.837 kb on + strand at 372.883 kb on + strand, within BWI76_RS01825 at 372.920 kb on + strand, within BWI76_RS01825 at 373.023 kb on + strand at 373.023 kb on + strand at 373.026 kb on - strand at 373.147 kb on + strand at 373.151 kb on + strand at 373.230 kb on - strand at 373.261 kb on + strand at 373.329 kb on - strand at 373.371 kb on - strand at 373.512 kb on + strand, within BWI76_RS01830 at 373.643 kb on + strand, within BWI76_RS01830 at 373.681 kb on + strand, within BWI76_RS01830 at 373.684 kb on - strand, within BWI76_RS01830 at 373.716 kb on - strand, within BWI76_RS01830 at 373.860 kb on + strand, within BWI76_RS01830 at 373.969 kb on - strand, within BWI76_RS01830 at 373.978 kb on + strand, within BWI76_RS01830 at 374.161 kb on + strand, within BWI76_RS01830 at 374.580 kb on + strand, within BWI76_RS01835 at 374.586 kb on + strand, within BWI76_RS01835 at 374.594 kb on - strand, within BWI76_RS01835 at 374.642 kb on + strand, within BWI76_RS01835 at 374.789 kb on + strand at 375.168 kb on - strand, within BWI76_RS01840
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 372,349 + BWI76_RS01825 0.51 -0.2 372,361 + BWI76_RS01825 0.51 -0.2 372,452 + BWI76_RS01825 0.57 -0.6 372,661 + BWI76_RS01825 0.71 -0.5 372,833 - BWI76_RS01825 0.82 -0.2 372,837 + +2.8 372,883 + BWI76_RS01825 0.85 -0.8 372,920 + BWI76_RS01825 0.88 -0.7 373,023 + +0.6 373,023 + +0.6 373,026 - -0.6 373,147 + -1.2 373,151 + -0.0 373,230 - -0.5 373,261 + +0.5 373,329 - -0.6 373,371 - -0.1 373,512 + BWI76_RS01830 0.18 +0.0 373,643 + BWI76_RS01830 0.29 +0.6 373,681 + BWI76_RS01830 0.32 +0.2 373,684 - BWI76_RS01830 0.32 -0.1 373,716 - BWI76_RS01830 0.35 -0.2 373,860 + BWI76_RS01830 0.47 -0.6 373,969 - BWI76_RS01830 0.56 +0.3 373,978 + BWI76_RS01830 0.57 +0.9 374,161 + BWI76_RS01830 0.72 +0.3 374,580 + BWI76_RS01835 0.22 -0.3 374,586 + BWI76_RS01835 0.24 +0.6 374,594 - BWI76_RS01835 0.27 +0.3 374,642 + BWI76_RS01835 0.43 +0.3 374,789 + -0.3 375,168 - BWI76_RS01840 0.28 +1.0
Or see this region's nucleotide sequence