Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_27735

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
6,045,051	+		AO353_27730	0.39	-2.5
6,045,051	+		AO353_27730	0.39	-0.6
6,045,051	+		AO353_27730	0.39	+0.6
6,045,051	+		AO353_27730	0.39	-2.9
6,045,051	+		AO353_27730	0.39	-1.5
6,045,051	+		AO353_27730	0.39	-1.9
6,045,051	+		AO353_27730	0.39	-1.5
6,045,052	-		AO353_27730	0.40	+0.2
6,045,052	-		AO353_27730	0.40	-2.5
6,045,052	-		AO353_27730	0.40	-1.9
6,045,052	-		AO353_27730	0.40	-1.7
6,045,052	-		AO353_27730	0.40	+0.2
6,045,052	-		AO353_27730	0.40	-0.5
6,045,104	+		AO353_27730	0.46	+1.5
6,045,104	+		AO353_27730	0.46	-0.9
6,045,105	-		AO353_27730	0.46	-1.7
6,045,165	+		AO353_27730	0.54	+1.7
6,045,165	+		AO353_27730	0.54	+1.8
6,045,165	+		AO353_27730	0.54	-1.1
6,045,166	-		AO353_27730	0.54	-1.2
6,045,166	-		AO353_27730	0.54	-0.9
6,045,166	-		AO353_27730	0.54	-3.3
6,045,166	-		AO353_27730	0.54	+0.7
6,045,187	+		AO353_27730	0.57	-1.9
6,045,187	+		AO353_27730	0.57	-0.4
6,045,225	+		AO353_27730	0.61	-1.3
6,045,225	+		AO353_27730	0.61	-0.1
6,045,225	+		AO353_27730	0.61	-2.5
6,045,225	+		AO353_27730	0.61	-1.5
6,045,225	+		AO353_27730	0.61	+1.0
6,045,225	+		AO353_27730	0.61	-0.4
6,045,226	-		AO353_27730	0.61	+2.1
6,045,226	-		AO353_27730	0.61	+0.7
6,045,226	-		AO353_27730	0.61	-0.2
6,045,226	-		AO353_27730	0.61	-1.2
6,045,226	-		AO353_27730	0.61	-0.9
6,045,276	+		AO353_27730	0.68	-0.5
6,045,276	+		AO353_27730	0.68	-0.5
6,045,277	-		AO353_27730	0.68	+0.0
6,045,277	-		AO353_27730	0.68	+1.2
6,045,277	-		AO353_27730	0.68	-1.2
6,045,277	-		AO353_27730	0.68	+2.0
6,045,277	-		AO353_27730	0.68	+0.2
6,045,277	-		AO353_27730	0.68	-3.4
6,045,361	+		AO353_27730	0.78	-2.2
6,045,361	+		AO353_27730	0.78	-2.4
6,045,361	+		AO353_27730	0.78	-1.6
6,045,361	+		AO353_27730	0.78	-1.8
6,045,361	+		AO353_27730	0.78	-1.6
6,045,361	+		AO353_27730	0.78	+0.2
6,045,362	-		AO353_27730	0.78	-1.1
6,045,474	+				+0.2
6,045,474	+				-1.1
6,045,474	+				-0.4
6,045,474	+				-2.6
6,045,474	+				-1.5
6,045,474	+				+0.6
6,045,474	+				-0.5
6,045,475	-				-1.1
6,045,475	-				+1.2
6,045,475	-				-1.2
6,045,475	-				+0.9
6,045,475	-				-1.1
6,045,475	-				-0.6
6,045,475	-				-1.9
6,045,475	-				+0.9
6,045,480	-				-1.4
6,045,480	-				-0.9
6,045,531	+				-1.4
6,045,531	+				+0.1
6,045,532	-				-1.7
6,045,560	+				-2.3
6,045,560	+				-0.8
6,045,560	+				-2.5
6,045,564	-				+0.8
6,045,564	-				-2.2
6,045,569	-				+1.2
6,045,576	+				-2.1
6,045,591	-				+1.1
6,045,596	+				-0.8
6,045,687	+				-2.2
6,045,728	+				-2.2
6,045,785	+				-0.9
6,045,785	+				+1.6
6,045,785	+				-2.0
6,045,785	+				+0.4
6,045,785	+				+0.9
6,045,785	+				+0.6
6,045,785	+				+0.9
6,045,785	+				+1.6
6,045,786	-				+1.0
6,045,786	-				-1.2
6,045,786	-				-1.4
6,045,788	+				-3.2
6,045,788	+				+1.1
6,045,788	+				-0.3
6,045,788	+				-2.2
6,045,788	+				+0.4
6,045,788	+				+0.8
6,045,788	+				-1.5
6,045,788	+				+2.0
6,045,789	-				-1.0
6,045,789	-				-0.4
6,045,789	-				+0.8
6,045,789	-				-1.8
6,045,789	-				+0.5
6,045,789	-				-0.2
6,045,817	+				-1.4
6,045,817	+				+1.9
6,045,817	+				-1.9
6,045,817	+				-0.6
6,045,817	+				+0.9
6,045,817	+				+2.5
6,045,817	+				-0.1
6,045,817	+				-1.5
6,045,818	-				-0.8
6,045,818	-				-0.8
6,045,818	-				-3.3
6,045,818	-				-0.2
6,045,818	-				-2.5
6,045,818	-				+1.0
6,045,818	-				-0.8
6,045,818	-				-1.9
6,045,818	-				-2.2
6,045,818	-				-1.0
6,045,819	+				+0.6
6,045,819	+				+0.7
6,045,819	+				+3.7
6,045,819	+				-1.3
6,045,820	-				-0.9
6,045,820	-				-0.7
6,045,860	+				-0.1
6,045,933	+				-1.4
6,045,960	+				-0.9
6,045,960	+				+0.2
6,045,960	+				-1.6
6,045,960	+				-0.4
6,045,960	+				-2.4
6,045,960	+				+0.1
6,045,960	+				+0.6
6,045,960	+				-1.8
6,045,960	+				-1.5
6,045,961	-				-0.4
6,045,961	-				-0.2
6,046,011	+				+2.0
6,046,011	+				+0.5
6,046,012	-				-1.1
6,046,012	-				+0.3
6,046,012	-				+0.1
6,046,025	+				+1.5
6,046,025	+				-2.0
6,046,025	+				-2.4
6,046,026	-				-1.7
6,046,026	-				-0.4
6,046,116	+				-0.9
6,046,116	+				-0.5
6,046,117	-				-0.5
6,046,117	-				-0.9
6,046,288	+		AO353_27735	0.19	-1.0
6,046,298	+		AO353_27735	0.20	-1.9
6,046,298	+		AO353_27735	0.20	-2.3
6,046,320	+		AO353_27735	0.22	-0.8
6,046,320	+		AO353_27735	0.22	-1.2
6,046,321	-		AO353_27735	0.22	-1.9
6,046,321	-		AO353_27735	0.22	+1.0
6,046,321	-		AO353_27735	0.22	-3.0
6,046,321	-		AO353_27735	0.22	-1.6
6,046,389	+		AO353_27735	0.27	-1.0
6,046,494	+		AO353_27735	0.35	-0.4
6,046,495	-		AO353_27735	0.35	-0.3
6,046,495	-		AO353_27735	0.35	-1.8
6,046,495	-		AO353_27735	0.35	-2.4
6,046,503	+		AO353_27735	0.36	+1.7
6,046,504	-		AO353_27735	0.36	+0.0
6,046,504	-		AO353_27735	0.36	+0.2
6,046,561	-		AO353_27735	0.40	+0.8
6,046,661	-		AO353_27735	0.47	-1.4
6,046,661	-		AO353_27735	0.47	+1.4
6,046,842	+		AO353_27735	0.61	-1.2
6,046,843	-		AO353_27735	0.61	-1.1
6,046,890	+		AO353_27735	0.65	-1.2
6,047,001	+		AO353_27735	0.73	-2.2
6,047,001	+		AO353_27735	0.73	-0.8
6,047,001	+		AO353_27735	0.73	+0.1
6,047,001	+		AO353_27735	0.73	-2.2
6,047,002	-				+1.6
6,047,002	-		AO353_27735	0.73	-0.6
6,047,088	+		AO353_27735	0.80	-1.2
6,047,089	-		AO353_27735	0.80	+0.9
6,047,089	-		AO353_27735	0.80	-1.7
6,047,089	-		AO353_27735	0.80	-2.6
6,047,089	-		AO353_27735	0.80	-0.9
6,047,184	+		AO353_27735	0.87	-1.2
6,047,230	-				+0.6
6,047,707	+				-0.7
6,047,707	+				+0.8
6,047,707	+				-1.4
6,047,707	+				-0.4
6,047,707	+				+0.2
6,047,707	+				+2.2
6,047,708	-				-1.2
6,047,708	-				-2.2
6,047,708	-				-1.4
6,047,737	+				+1.9
6,047,876	+				-0.8
6,047,890	+				-0.6
6,047,890	+				+0.5
6,047,896	+				+1.1
6,047,897	-				-1.1
6,047,937	+				-1.6