Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20650

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,529,285	+		AO353_20645	0.33	-0.8
4,529,286	-		AO353_20645	0.33	-2.4
4,529,286	-		AO353_20645	0.33	-0.9
4,529,326	+		AO353_20645	0.37	-1.9
4,529,326	+		AO353_20645	0.37	-0.4
4,529,326	+		AO353_20645	0.37	-1.1
4,529,576	+		AO353_20645	0.62	+0.2
4,529,577	-		AO353_20645	0.62	+1.3
4,529,632	+		AO353_20645	0.67	-0.1
4,529,632	+		AO353_20645	0.67	+0.7
4,529,633	-		AO353_20645	0.68	-0.3
4,529,809	+		AO353_20645	0.85	+1.3
4,529,826	+		AO353_20645	0.87	-1.2
4,529,826	+				+0.9
4,529,826	+		AO353_20645	0.87	+0.1
4,529,826	+		AO353_20645	0.87	-2.2
4,529,826	+		AO353_20645	0.87	-1.5
4,529,827	-		AO353_20645	0.87	-0.8
4,529,827	-		AO353_20645	0.87	-1.9
4,529,871	-				-1.9
4,529,871	-				-1.2
4,529,871	-				-1.6
4,529,871	-				+0.0
4,529,891	+				-2.2
4,529,892	-				-1.4
4,529,896	+				-0.5
4,529,896	+				+1.1
4,529,897	-				-0.0
4,529,945	-				-0.7
4,529,945	-				-2.2
4,529,945	-				-0.8
4,529,945	-				+0.1
4,529,945	-				-1.5
4,529,958	+				-1.8
4,529,958	+				-0.4
4,529,959	-				+1.0
4,529,959	-				-0.6
4,529,965	+				-0.5
4,529,965	+				+0.3
4,529,965	+				+0.5
4,529,965	+				-1.6
4,529,966	-				+0.5
4,529,966	-				-1.0
4,529,986	+				-0.5
4,529,987	-				-1.1
4,529,993	+				+0.5
4,529,994	-				-2.0
4,529,994	-				+1.3
4,529,994	-				-2.8
4,529,999	+				-2.2
4,530,066	+				-0.0
4,530,067	-				-0.7
4,530,067	-				-1.1
4,530,067	-				-2.2
4,530,107	+				-1.3
4,530,108	-				-0.5
4,530,108	-				+0.5
4,530,166	+				-0.7
4,530,166	+				-2.8
4,530,166	+				-1.3
4,530,167	-				-1.2
4,530,167	-				-3.3
4,530,167	-				+0.3
4,530,192	+				-1.9
4,530,199	-				-1.2
4,530,439	+		AO353_20650	0.10	-0.9
4,530,439	+		AO353_20650	0.10	-1.2
4,530,539	+		AO353_20650	0.14	-1.2
4,530,539	+		AO353_20650	0.14	-1.1
4,530,540	-		AO353_20650	0.14	-2.6
4,530,546	+		AO353_20650	0.14	+0.4
4,530,546	+		AO353_20650	0.14	-1.5
4,530,546	+		AO353_20650	0.14	-0.3
4,530,546	+		AO353_20650	0.14	-1.5
4,530,547	-		AO353_20650	0.14	-3.0
4,530,547	-		AO353_20650	0.14	-2.7
4,530,547	-		AO353_20650	0.14	-1.0
4,530,655	+		AO353_20650	0.19	+0.6
4,530,656	-		AO353_20650	0.19	-0.9
4,530,656	-		AO353_20650	0.19	-1.4
4,530,857	-		AO353_20650	0.26	-1.8
4,531,037	-		AO353_20650	0.33	+0.6
4,531,072	+		AO353_20650	0.35	-1.4
4,531,072	+		AO353_20650	0.35	-0.9
4,531,072	+		AO353_20650	0.35	+0.1
4,531,072	+		AO353_20650	0.35	-0.5
4,531,073	-		AO353_20650	0.35	-1.2
4,531,073	-		AO353_20650	0.35	-3.9
4,531,073	-		AO353_20650	0.35	-1.9
4,531,073	-		AO353_20650	0.35	-2.0
4,531,103	-		AO353_20650	0.36	-0.3
4,531,140	+		AO353_20650	0.37	-0.3
4,531,141	-		AO353_20650	0.37	-2.5
4,531,311	+		AO353_20650	0.44	-1.2
4,531,391	+		AO353_20650	0.47	-0.7
4,531,391	+		AO353_20650	0.47	-2.6
4,531,392	-		AO353_20650	0.47	-1.5
4,531,392	-		AO353_20650	0.47	+0.5
4,531,662	+		AO353_20650	0.57	-1.1
4,531,663	-		AO353_20650	0.57	-2.2
4,531,844	+		AO353_20650	0.64	-1.9
4,531,845	-		AO353_20650	0.64	-0.4
4,532,018	+		AO353_20650	0.71	-0.7
4,532,018	+		AO353_20650	0.71	-0.9
4,532,018	+		AO353_20650	0.71	-1.7
4,532,018	+		AO353_20650	0.71	-2.5
4,532,019	-		AO353_20650	0.71	+0.8
4,532,019	-		AO353_20650	0.71	-0.1
4,532,019	-		AO353_20650	0.71	-2.4
4,532,675	+				+0.1
4,532,675	+				-2.1
4,532,675	+				-1.1
4,532,675	+				-0.3
4,532,675	+				+0.5
4,532,675	+				-0.9
4,532,675	+				-0.1
4,532,675	+				+0.1
4,532,675	+				-1.5
4,532,676	-				-0.0
4,532,676	-				-2.1
4,532,676	-				-2.7
4,532,676	-				-1.9
4,532,676	-				-1.4
4,532,676	-				-1.1
4,532,676	-				-0.2
4,532,676	-				+0.5
4,532,676	-				-0.1
4,532,676	-				-0.7
4,532,738	-				-2.5
4,532,804	-				-2.0
4,532,866	+				+0.1
4,532,867	-				+0.9
4,532,867	-				-1.7
4,532,867	-				+2.8
4,532,867	-				-2.2
4,532,940	+				-0.1
4,532,941	-				-0.7
4,532,941	-				+1.0
4,532,941	-				+1.0
4,532,960	+				-0.3
4,532,961	-				-0.1
4,533,016	+				-1.3
4,533,016	+				+3.1
4,533,017	-				-1.3
4,533,017	-				-1.4
4,533,017	-				+1.7
4,533,017	-				-0.8
4,533,017	-				+0.7
4,533,017	-				-0.1
4,533,017	-				+1.8
4,533,034	+				+0.2
4,533,034	+				-2.5
4,533,035	-				-0.7
4,533,115	+		AO353_20655	0.15	-0.2
4,533,116	-		AO353_20655	0.15	-1.4
4,533,136	+		AO353_20655	0.18	+0.3
4,533,137	-		AO353_20655	0.18	-2.0
4,533,137	-		AO353_20655	0.18	-0.1
4,533,137	-		AO353_20655	0.18	+0.9
4,533,253	+		AO353_20655	0.36	-0.3
4,533,254	-		AO353_20655	0.36	-0.7
4,533,254	-		AO353_20655	0.36	+1.0
4,533,254	-		AO353_20655	0.36	-1.2
4,533,254	-		AO353_20655	0.36	+1.0
4,533,375	+		AO353_20655	0.55	-0.3
4,533,375	+		AO353_20655	0.55	-0.4
4,533,375	+		AO353_20655	0.55	-1.5
4,533,375	+		AO353_20655	0.55	-1.8
4,533,376	-		AO353_20655	0.55	+0.2
4,533,376	-		AO353_20655	0.55	+1.4
4,533,376	-		AO353_20655	0.55	+2.1
4,533,376	-		AO353_20655	0.55	-0.7
4,533,376	-		AO353_20655	0.55	+0.4
4,533,376	-		AO353_20655	0.55	+0.7
4,533,376	-		AO353_20655	0.55	+1.8
4,533,376	-		AO353_20655	0.55	+1.5
4,533,376	-		AO353_20655	0.55	+2.0
4,533,519	+		AO353_20655	0.76	+0.4
4,533,519	+		AO353_20655	0.76	-1.2
4,533,519	+		AO353_20655	0.76	+2.0
4,533,520	-		AO353_20655	0.77	-1.2
4,533,637	+				-0.9
4,533,637	+				-0.9
4,533,695	+				-1.9
4,533,696	-				+2.0
4,533,696	-				+1.1
4,533,707	+				-0.5
4,533,708	-				+1.4
4,533,716	-				+1.8
4,533,716	-				-2.1
4,533,719	+				+0.3
4,533,719	+				-0.8
4,533,719	+				-1.6
4,533,719	+				-3.3
4,533,719	+				+3.6
4,533,719	+				-0.2
4,533,719	+				-0.1
4,533,719	+				+3.2
4,533,719	+				+1.3
4,533,719	+				-0.9
4,533,719	+				+1.8
4,533,719	+				+1.6
4,533,719	+				-0.6
4,533,719	+				-1.9
4,533,719	+				+1.2
4,533,719	+				-1.7
4,533,719	+				+1.6
4,533,719	+				-1.9
4,533,719	+				+3.7
4,533,719	+				+0.9
4,533,720	-				+0.0
4,533,720	-				-1.6
4,533,720	-				+0.9
4,533,720	-				+0.7
4,533,720	-				+2.3
4,533,720	-				-0.7
4,533,720	-				+1.7
4,533,720	-				-2.2
4,533,720	-				+0.1
4,533,720	-				-1.2
4,533,720	-				+1.1
4,533,720	-				+2.2
4,533,720	-				+0.0
4,533,720	-				-1.9
4,533,720	-				+0.9
4,533,720	-				-1.3
4,533,720	-				+0.3
4,533,720	-				-2.7
4,533,720	-				+0.1
4,533,720	-				+1.5
4,533,720	-				-1.1
4,533,720	-				-0.7
4,533,720	-				-0.3
4,533,720	-				+1.3
4,533,720	-				-0.2
4,533,720	-				+2.7
4,533,720	-				-2.3
4,533,721	+				+0.8
4,533,722	-				+0.1
4,533,722	-				+1.5
4,533,723	+				+0.3
4,533,763	+				+0.7