Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20305

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,462,484	+		AO353_20295	0.77	-1.3
4,462,484	+		AO353_20295	0.77	-1.7
4,462,484	+		AO353_20295	0.77	+0.2
4,462,484	+		AO353_20295	0.77	-0.8
4,462,484	+		AO353_20295	0.77	-1.7
4,462,485	-		AO353_20295	0.77	-0.2
4,462,485	-		AO353_20295	0.77	-0.2
4,462,493	+		AO353_20295	0.78	-1.6
4,462,494	-		AO353_20295	0.78	-1.9
4,462,494	-		AO353_20295	0.78	+3.1
4,462,537	+		AO353_20295	0.83	-0.9
4,462,538	-		AO353_20295	0.83	+1.1
4,462,538	-				-0.1
4,462,538	-		AO353_20295	0.83	+0.5
4,462,616	+				+0.5
4,462,616	+				+0.3
4,462,616	+				-0.3
4,462,616	+				-0.4
4,462,617	-				-0.6
4,462,617	-				+2.9
4,462,617	-				-0.7
4,462,617	-				-1.7
4,462,617	-				-0.5
4,462,617	-				-2.1
4,462,631	+				+3.2
4,462,631	+				-1.4
4,462,631	+				-1.1
4,462,632	-				-2.3
4,462,632	-				+2.5
4,462,664	+				-0.8
4,462,664	+				-2.3
4,462,664	+				+1.5
4,462,664	+				+0.2
4,462,664	+				-1.4
4,462,664	+				+0.3
4,462,664	+				-0.6
4,462,664	+				+1.0
4,462,664	+				+0.3
4,462,664	+				-1.3
4,462,665	-				+0.0
4,462,665	-				-0.7
4,462,665	-				-1.1
4,462,665	-				-0.7
4,462,665	-				-1.9
4,462,665	-				-0.3
4,462,697	+				-2.2
4,462,697	+				+0.2
4,462,697	+				+0.3
4,462,698	-				-2.0
4,462,799	+				+1.1
4,462,799	+				-0.6
4,462,799	+				-2.1
4,462,800	-				+1.3
4,462,800	-				-0.6
4,462,805	+				-0.6
4,462,806	-				-1.8
4,462,806	-				+0.2
4,462,823	+		AO353_20300	0.12	+1.5
4,462,823	+		AO353_20300	0.12	+0.1
4,462,865	-		AO353_20300	0.17	+0.1
4,462,865	-		AO353_20300	0.17	-0.2
4,462,871	+		AO353_20300	0.18	+1.1
4,462,871	+		AO353_20300	0.18	+1.4
4,462,872	-		AO353_20300	0.18	-0.5
4,462,872	-		AO353_20300	0.18	+1.4
4,462,872	-		AO353_20300	0.18	-0.4
4,462,899	-		AO353_20300	0.22	+0.4
4,462,899	-		AO353_20300	0.22	+1.3
4,462,899	-		AO353_20300	0.22	-2.5
4,462,899	-		AO353_20300	0.22	-3.8
4,462,899	-		AO353_20300	0.22	-1.6
4,462,931	+		AO353_20300	0.26	-0.7
4,462,931	+				+1.5
4,462,932	-		AO353_20300	0.26	+0.3
4,462,932	-				+0.2
4,462,932	-		AO353_20300	0.26	+0.5
4,462,932	-		AO353_20300	0.26	-2.8
4,463,036	+		AO353_20300	0.40	+0.2
4,463,036	+		AO353_20300	0.40	-1.1
4,463,036	+		AO353_20300	0.40	+0.6
4,463,036	+		AO353_20300	0.40	-1.7
4,463,036	+		AO353_20300	0.40	+1.1
4,463,036	+		AO353_20300	0.40	+1.0
4,463,036	+		AO353_20300	0.40	-1.8
4,463,037	-		AO353_20300	0.40	-1.0
4,463,037	-		AO353_20300	0.40	-1.8
4,463,037	-		AO353_20300	0.40	+4.3
4,463,037	-		AO353_20300	0.40	+3.1
4,463,037	-		AO353_20300	0.40	-0.2
4,463,037	-		AO353_20300	0.40	+4.1
4,463,037	-		AO353_20300	0.40	+2.4
4,463,037	-		AO353_20300	0.40	+0.0
4,463,058	+		AO353_20300	0.43	+1.8
4,463,081	+		AO353_20300	0.46	-1.4
4,463,081	+		AO353_20300	0.46	+1.2
4,463,081	+		AO353_20300	0.46	+0.2
4,463,082	-		AO353_20300	0.46	-0.0
4,463,399	+		AO353_20300	0.88	+0.2
4,463,400	-		AO353_20300	0.88	+0.2
4,463,400	-		AO353_20300	0.88	-0.0
4,463,400	-		AO353_20300	0.88	-1.7
4,463,400	-		AO353_20300	0.88	-2.6
4,463,400	-		AO353_20300	0.88	+0.3
4,463,447	+				+0.9
4,463,447	+				+0.9
4,463,447	+				+0.8
4,463,447	+				-2.0
4,463,448	-				+1.0
4,463,614	+		AO353_20305	0.26	-0.8
4,463,615	-		AO353_20305	0.26	+2.3
4,463,615	-		AO353_20305	0.26	-0.1
4,463,968	-				-1.1
4,464,002	+				-2.5
4,464,009	+				-2.3
4,464,009	+				+0.2
4,464,009	+				+0.5
4,464,009	+				-2.2
4,464,010	-				-1.2
4,464,047	-				+0.7
4,464,065	+				-0.2
4,464,065	+				+0.7
4,464,085	-				-1.2
4,464,085	-				-1.4
4,464,085	-				+0.8
4,464,085	-				-2.1
4,464,239	+				-0.8
4,464,268	+		AO353_20310	0.11	+2.6
4,464,269	-		AO353_20310	0.11	+1.5
4,464,269	-		AO353_20310	0.11	-1.2
4,464,269	-		AO353_20310	0.11	+0.9
4,464,344	+		AO353_20310	0.18	-3.2
4,464,344	+		AO353_20310	0.18	-1.7
4,464,344	+		AO353_20310	0.18	-1.1
4,464,344	+		AO353_20310	0.18	+1.5
4,464,344	+		AO353_20310	0.18	+0.3
4,464,344	+		AO353_20310	0.18	-0.4
4,464,345	-		AO353_20310	0.18	+0.7
4,464,345	-		AO353_20310	0.18	-1.3
4,464,345	-		AO353_20310	0.18	+1.3
4,464,345	-		AO353_20310	0.18	-2.0
4,464,345	-		AO353_20310	0.18	-0.3
4,464,625	+		AO353_20310	0.43	+1.4
4,464,625	+		AO353_20310	0.43	+0.3
4,464,626	-		AO353_20310	0.43	+1.0
4,464,626	-		AO353_20310	0.43	-2.7
4,464,626	-		AO353_20310	0.43	-0.2
4,464,626	-		AO353_20310	0.43	-1.7
4,464,626	-		AO353_20310	0.43	-0.2
4,464,626	-		AO353_20310	0.43	+0.7
4,464,632	+		AO353_20310	0.44	-0.2
4,464,632	+		AO353_20310	0.44	-3.4
4,464,632	+		AO353_20310	0.44	-0.7
4,464,632	+		AO353_20310	0.44	-1.2
4,464,633	-		AO353_20310	0.44	-0.7
4,464,633	-		AO353_20310	0.44	-0.3
4,464,633	-		AO353_20310	0.44	+1.2
4,464,633	-		AO353_20310	0.44	-0.7
4,464,633	-		AO353_20310	0.44	-0.3
4,464,763	+		AO353_20310	0.56	+0.1
4,464,763	+		AO353_20310	0.56	+1.4
4,464,763	+		AO353_20310	0.56	-1.0
4,464,763	+		AO353_20310	0.56	-1.1
4,464,764	-		AO353_20310	0.56	-0.3
4,464,764	-		AO353_20310	0.56	+1.2
4,464,778	+		AO353_20310	0.57	-2.0
4,464,778	+		AO353_20310	0.57	-1.4
4,464,778	+		AO353_20310	0.57	-1.3
4,464,778	+		AO353_20310	0.57	+0.2
4,464,778	+		AO353_20310	0.57	-1.0
4,464,778	+		AO353_20310	0.57	+1.0
4,464,778	+		AO353_20310	0.57	-0.8
4,464,778	+		AO353_20310	0.57	-0.2
4,464,779	-		AO353_20310	0.58	-2.1
4,464,779	-		AO353_20310	0.58	+0.2
4,464,799	+		AO353_20310	0.59	+0.2
4,464,799	+		AO353_20310	0.59	+0.5
4,464,800	-		AO353_20310	0.59	+1.4
4,464,957	+		AO353_20310	0.74	+0.5
4,464,957	+		AO353_20310	0.74	+1.4
4,464,958	-		AO353_20310	0.74	-0.3
4,464,975	+		AO353_20310	0.75	+0.9
4,464,976	-		AO353_20310	0.76	-0.2