Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20095

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,418,886	+		AO353_20085	0.58	-1.3
4,418,886	+		AO353_20085	0.58	-0.5
4,418,886	+		AO353_20085	0.58	-1.4
4,418,887	-		AO353_20085	0.58	-1.6
4,418,887	-		AO353_20085	0.58	-0.4
4,418,889	+		AO353_20085	0.59	+0.5
4,418,889	+		AO353_20085	0.59	+1.5
4,418,889	+		AO353_20085	0.59	-0.3
4,418,890	-		AO353_20085	0.59	+2.7
4,418,890	-		AO353_20085	0.59	-2.1
4,418,890	-		AO353_20085	0.59	-1.2
4,418,890	-		AO353_20085	0.59	-1.3
4,418,916	-		AO353_20085	0.65	+1.4
4,418,929	-		AO353_20085	0.67	-2.7
4,418,929	-		AO353_20085	0.67	-0.1
4,418,932	+		AO353_20085	0.68	-0.5
4,418,933	-		AO353_20085	0.68	-0.9
4,418,933	-		AO353_20085	0.68	+2.7
4,418,933	-		AO353_20085	0.68	-0.8
4,418,952	+		AO353_20085	0.72	+1.2
4,418,952	+		AO353_20085	0.72	-0.7
4,418,952	+		AO353_20085	0.72	+0.3
4,418,953	-		AO353_20085	0.72	-0.3
4,418,953	-		AO353_20085	0.72	-0.5
4,418,953	-		AO353_20085	0.72	-1.8
4,418,953	-		AO353_20085	0.72	-0.8
4,418,964	+		AO353_20085	0.75	-0.6
4,418,964	+		AO353_20085	0.75	-2.2
4,418,964	+		AO353_20085	0.75	-0.3
4,418,965	-		AO353_20085	0.75	-1.3
4,418,965	-		AO353_20085	0.75	-0.7
4,419,126	+				-0.6
4,419,126	+				+2.0
4,419,126	+				+1.7
4,419,126	+				+2.2
4,419,126	+				+1.8
4,419,188	+				+0.3
4,419,188	+				+1.8
4,419,188	+				+0.8
4,419,188	+				-0.5
4,419,188	+				-1.2
4,419,189	-				+1.9
4,419,226	+				-0.5
4,419,227	-				-0.2
4,419,262	+				-0.3
4,419,262	+				+1.8
4,419,262	+				-0.5
4,419,262	+				-1.6
4,419,262	+				+3.0
4,419,263	-				-2.4
4,419,263	-				+1.5
4,419,348	+		AO353_20090	0.20	+1.1
4,419,443	+		AO353_20090	0.34	-1.2
4,419,443	+		AO353_20090	0.34	-0.4
4,419,443	+		AO353_20090	0.34	-1.7
4,419,443	+		AO353_20090	0.34	+0.4
4,419,443	+		AO353_20090	0.34	+0.3
4,419,443	+		AO353_20090	0.34	+0.1
4,419,444	-		AO353_20090	0.35	+0.2
4,419,466	+		AO353_20090	0.38	+1.5
4,419,507	+		AO353_20090	0.44	+2.5
4,419,508	-		AO353_20090	0.44	+0.3
4,419,508	-		AO353_20090	0.44	+0.2
4,419,571	-		AO353_20090	0.54	-1.4
4,419,579	-		AO353_20090	0.55	+2.6
4,419,750	+		AO353_20090	0.81	+0.8
4,419,750	+		AO353_20090	0.81	-3.1
4,419,750	+		AO353_20090	0.81	+1.8
4,419,750	+		AO353_20090	0.81	+0.5
4,419,751	-		AO353_20090	0.81	+3.5
4,419,751	-		AO353_20090	0.81	+1.6
4,419,751	-		AO353_20090	0.81	-0.5
4,419,751	-		AO353_20090	0.81	+0.1
4,419,751	-		AO353_20090	0.81	+0.5
4,419,751	-		AO353_20090	0.81	-0.1
4,419,792	+		AO353_20090	0.87	-1.1
4,419,792	+		AO353_20090	0.87	+1.3
4,419,792	+		AO353_20090	0.87	+0.2
4,419,792	+				+0.2
4,419,792	+		AO353_20090	0.87	-1.7
4,419,792	+		AO353_20090	0.87	+0.1
4,419,792	+		AO353_20090	0.87	-0.9
4,419,792	+		AO353_20090	0.87	-2.1
4,419,792	+		AO353_20090	0.87	-0.6
4,419,792	+		AO353_20090	0.87	+1.2
4,419,792	+		AO353_20090	0.87	-0.1
4,419,792	+		AO353_20090	0.87	-0.7
4,419,792	+		AO353_20090	0.87	-0.5
4,419,792	+		AO353_20090	0.87	-0.5
4,419,793	-		AO353_20090	0.87	-2.0
4,419,793	-		AO353_20090	0.87	+2.1
4,419,793	-		AO353_20090	0.87	-1.8
4,419,793	-		AO353_20090	0.87	+1.8
4,419,793	-		AO353_20090	0.87	-1.3
4,419,793	-		AO353_20090	0.87	+2.0
4,419,793	-		AO353_20090	0.87	+0.3
4,419,793	-		AO353_20090	0.87	+0.9
4,419,793	-		AO353_20090	0.87	+1.7
4,419,793	-		AO353_20090	0.87	-0.1
4,419,793	-		AO353_20090	0.87	-1.1
4,419,793	-		AO353_20090	0.87	-2.1
4,419,793	-		AO353_20090	0.87	+0.9
4,419,793	-		AO353_20090	0.87	-0.1
4,419,793	-		AO353_20090	0.87	+2.7
4,419,793	-		AO353_20090	0.87	-1.9
4,419,793	-		AO353_20090	0.87	+0.7
4,420,088	-		AO353_20095	0.16	-2.9
4,420,088	-		AO353_20095	0.16	+2.7
4,420,115	+		AO353_20095	0.18	-2.2
4,420,116	-		AO353_20095	0.18	-0.3
4,420,116	-		AO353_20095	0.18	-1.0
4,420,124	+		AO353_20095	0.19	+0.9
4,420,124	+		AO353_20095	0.19	-0.1
4,420,124	+		AO353_20095	0.19	-0.1
4,420,125	-		AO353_20095	0.19	+2.1
4,420,125	-		AO353_20095	0.19	+0.5
4,420,152	+		AO353_20095	0.21	-2.4
4,420,152	+		AO353_20095	0.21	-0.7
4,420,153	-		AO353_20095	0.21	-1.6
4,420,153	-		AO353_20095	0.21	+0.5
4,420,153	-		AO353_20095	0.21	-2.6
4,420,238	+		AO353_20095	0.27	-1.2
4,420,662	+		AO353_20095	0.59	+0.5
4,420,780	-		AO353_20095	0.68	-0.1
4,420,990	-		AO353_20095	0.84	-0.4
4,421,214	+				-0.1
4,421,215	-				-2.0
4,421,215	-				+1.4
4,421,215	-				+0.9
4,421,215	-				-0.5
4,421,270	+				-3.6
4,421,270	+				+0.7
4,421,271	-				+2.5
4,421,271	-				+0.1
4,421,271	-				-0.7
4,421,271	-				+1.5
4,421,271	-				+1.0
4,421,271	-				+0.5
4,421,271	-				-1.6
4,421,273	-				+0.2
4,421,273	-				+1.1
4,421,273	-				+1.9
4,421,290	-				-0.9
4,421,314	+				-1.8
4,421,315	-				+1.3
4,421,315	-				-1.4
4,421,315	-				+0.4
4,421,331	+				-0.3
4,421,331	+				-0.4
4,421,331	+				-0.6
4,421,331	+				+0.2
4,421,331	+				-2.4
4,421,331	+				-1.1
4,421,331	+				-0.2
4,421,331	+				-0.6
4,421,331	+				-2.1
4,421,331	+				-0.9
4,421,331	+				-1.3
4,421,331	+				+1.6
4,421,332	-				+1.3
4,421,332	-				-1.8
4,421,332	-				-0.0
4,421,332	-				-1.1
4,421,332	-				+2.8
4,421,332	-				-0.5
4,421,341	+				-1.4
4,421,342	-				+0.4
4,421,465	-		AO353_20100	0.27	+1.8
4,421,560	+		AO353_20100	0.46	+0.8
4,421,561	-		AO353_20100	0.46	+1.0
4,421,664	+		AO353_20100	0.66	-1.5
4,421,722	+		AO353_20100	0.78	-0.3
4,421,722	+		AO353_20100	0.78	-0.6
4,421,722	+		AO353_20100	0.78	-0.4
4,421,722	+		AO353_20100	0.78	+0.4
4,421,722	+		AO353_20100	0.78	+1.6
4,421,722	+		AO353_20100	0.78	-1.6
4,421,723	-		AO353_20100	0.78	-1.6
4,421,723	-		AO353_20100	0.78	+0.6
4,421,723	-		AO353_20100	0.78	+1.2
4,421,723	-		AO353_20100	0.78	-2.1
4,421,723	-		AO353_20100	0.78	+1.7
4,421,734	+		AO353_20100	0.80	-1.8
4,421,734	+		AO353_20100	0.80	+3.8
4,421,818	+				+1.0
4,421,818	+				-1.6
4,421,818	+				+2.3
4,421,818	+				-1.3
4,421,819	-				-0.9
4,421,819	-				-0.3
4,421,819	-				-1.6
4,421,834	-				+1.2
4,421,836	+				+0.7
4,421,852	-				-1.0
4,421,852	-				+0.7
4,421,886	+				-0.6
4,421,886	+				-1.2
4,421,887	-				+3.0
4,421,887	-				-0.4
4,421,914	-				+3.0
4,421,973	+				+1.1
4,421,974	-				+2.5
4,421,974	-				+1.0