Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18910

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,151,991	+		AO353_18905	0.43	+1.0
4,151,991	+		AO353_18905	0.43	-1.8
4,151,991	+		AO353_18905	0.43	+2.6
4,151,992	-		AO353_18905	0.43	+1.6
4,151,992	-		AO353_18905	0.43	+0.7
4,151,992	-		AO353_18905	0.43	-0.4
4,151,992	-		AO353_18905	0.43	-1.2
4,151,992	-		AO353_18905	0.43	-1.7
4,152,051	+		AO353_18905	0.50	-1.2
4,152,051	+		AO353_18905	0.50	+0.8
4,152,051	+				+1.2
4,152,051	+		AO353_18905	0.50	-1.7
4,152,052	-		AO353_18905	0.50	-0.6
4,152,052	-		AO353_18905	0.50	+1.2
4,152,052	-		AO353_18905	0.50	-0.8
4,152,052	-		AO353_18905	0.50	+0.2
4,152,052	-		AO353_18905	0.50	-0.9
4,152,121	+		AO353_18905	0.58	+0.9
4,152,121	+		AO353_18905	0.58	+3.4
4,152,201	+		AO353_18905	0.68	-0.0
4,152,201	+		AO353_18905	0.68	+0.5
4,152,201	+		AO353_18905	0.68	-1.9
4,152,201	+		AO353_18905	0.68	+0.1
4,152,201	+		AO353_18905	0.68	+0.8
4,152,202	-		AO353_18905	0.68	+3.0
4,152,202	-		AO353_18905	0.68	+0.8
4,152,202	-		AO353_18905	0.68	-1.2
4,152,202	-		AO353_18905	0.68	+1.1
4,152,202	-		AO353_18905	0.68	+0.8
4,152,202	-		AO353_18905	0.68	+2.2
4,152,202	-		AO353_18905	0.68	-1.4
4,152,202	-		AO353_18905	0.68	+0.0
4,152,202	-		AO353_18905	0.68	-1.8
4,152,202	-		AO353_18905	0.68	+1.0
4,152,202	-		AO353_18905	0.68	+0.3
4,152,202	-		AO353_18905	0.68	+0.9
4,152,202	-		AO353_18905	0.68	-1.8
4,152,202	-		AO353_18905	0.68	-0.1
4,152,202	-		AO353_18905	0.68	+2.3
4,152,237	+		AO353_18905	0.72	+0.5
4,152,340	+		AO353_18905	0.84	-0.7
4,152,372	+		AO353_18905	0.88	+0.1
4,152,373	-		AO353_18905	0.88	+0.2
4,152,373	-		AO353_18905	0.88	+2.3
4,152,373	-		AO353_18905	0.88	+0.2
4,152,426	+				-1.6
4,152,426	+				-1.6
4,152,426	+				-1.5
4,152,426	+				+2.7
4,152,426	+				+0.5
4,152,426	+				+0.4
4,152,426	+				-1.8
4,152,427	-				-0.4
4,152,427	-				+2.5
4,152,449	+				+0.0
4,152,450	-				+0.8
4,152,450	-				+3.5
4,152,474	+				-2.0
4,152,475	-				-0.4
4,152,475	-				-2.5
4,152,475	-				-0.6
4,152,539	+				-1.6
4,152,539	+				+0.2
4,152,539	+				-0.2
4,152,539	+				-0.9
4,152,540	-				+0.3
4,152,540	-				+2.1
4,152,546	+				+3.1
4,152,546	+				+0.4
4,152,547	-				-0.9
4,152,547	-				+1.2
4,152,682	+				+3.0
4,152,682	+				-1.0
4,152,683	-				-0.9
4,152,683	-				+0.7
4,152,683	-				-0.2
4,152,683	-				-0.8
4,152,683	-				+0.3
4,152,783	+				-2.0
4,152,784	-				-0.2
4,152,784	-				+3.5
4,152,793	+				+0.2
4,152,793	+				+1.9
4,152,793	+				-2.5
4,152,793	+				+0.0
4,152,793	+				+1.0
4,152,793	+				-0.5
4,152,793	+				-0.6
4,152,793	+				+0.1
4,152,793	+				-0.4
4,152,793	+				+0.4
4,152,793	+				+1.3
4,152,794	-				+0.7
4,152,794	-				-0.9
4,152,794	-				+2.2
4,152,794	-				+1.1
4,152,794	-				+2.4
4,152,794	-				-0.5
4,152,794	-				+1.5
4,152,794	-				+1.9
4,152,794	-				-1.6
4,152,794	-				+1.9
4,152,794	-				-1.1
4,152,850	+				-0.5
4,152,851	-				-2.6
4,152,851	-				-0.2
4,152,890	+				-1.4
4,152,890	+				-2.2
4,152,890	+				-0.3
4,152,890	+				+1.6
4,152,891	-				-0.4
4,152,891	-				-1.0
4,152,891	-				-0.8
4,152,891	-				+1.0
4,152,900	-				+0.5
4,152,901	+				+0.8
4,152,901	+				+0.2
4,152,901	+				+0.5
4,152,902	-				-0.1
4,152,902	-				+0.2
4,152,925	+				+1.1
4,152,925	+				+1.9
4,152,926	-				+1.8
4,152,926	-				+0.6
4,153,023	+				-1.2
4,153,023	+				-2.2
4,153,091	+				-0.0
4,153,092	-				+1.6
4,153,092	-				-0.4
4,153,218	+		AO353_18910	0.19	+0.7
4,153,218	+		AO353_18910	0.19	-0.9
4,153,218	+		AO353_18910	0.19	+2.8
4,153,218	+		AO353_18910	0.19	+1.3
4,153,218	+		AO353_18910	0.19	+1.2
4,153,218	+		AO353_18910	0.19	-0.5
4,153,218	+		AO353_18910	0.19	-0.9
4,153,218	+		AO353_18910	0.19	+0.2
4,153,218	+		AO353_18910	0.19	-1.7
4,153,218	+		AO353_18910	0.19	+1.0
4,153,219	-		AO353_18910	0.19	-0.6
4,153,219	-		AO353_18910	0.19	-2.1
4,153,219	-		AO353_18910	0.19	+0.5
4,153,219	-		AO353_18910	0.19	+0.8
4,153,219	-		AO353_18910	0.19	+1.9
4,153,219	-		AO353_18910	0.19	+0.8
4,153,219	-		AO353_18910	0.19	-0.5
4,153,219	-		AO353_18910	0.19	-0.4
4,153,302	+		AO353_18910	0.25	+1.5
4,153,302	+		AO353_18910	0.25	+0.8
4,153,302	+		AO353_18910	0.25	-1.7
4,153,302	+		AO353_18910	0.25	-1.2
4,153,303	-		AO353_18910	0.25	-0.5
4,153,303	-		AO353_18910	0.25	+1.9
4,153,303	-		AO353_18910	0.25	-0.7
4,153,381	-		AO353_18910	0.31	-0.4
4,153,381	-		AO353_18910	0.31	+0.1
4,153,392	+		AO353_18910	0.32	-3.4
4,153,428	+		AO353_18910	0.34	-0.9
4,153,616	+		AO353_18910	0.48	-0.1
4,153,617	-		AO353_18910	0.48	+1.9
4,153,642	-		AO353_18910	0.50	-2.2
4,153,642	-		AO353_18910	0.50	+1.6
4,153,642	-		AO353_18910	0.50	-1.7
4,153,642	-		AO353_18910	0.50	+2.3
4,153,642	-		AO353_18910	0.50	-2.3
4,153,642	-		AO353_18910	0.50	+1.8
4,153,723	+		AO353_18910	0.56	-2.5
4,153,724	-		AO353_18910	0.56	-0.1
4,153,904	+		AO353_18910	0.69	-0.2
4,153,905	-		AO353_18910	0.69	-0.4
4,153,905	-		AO353_18910	0.69	+1.1
4,153,931	+		AO353_18910	0.71	+3.3
4,153,931	+		AO353_18910	0.71	-1.1
4,153,931	+		AO353_18910	0.71	+1.5
4,153,931	+		AO353_18910	0.71	+2.6
4,153,932	-		AO353_18910	0.71	+1.0
4,153,932	-		AO353_18910	0.71	+1.3
4,153,932	-		AO353_18910	0.71	+2.5
4,153,932	-		AO353_18910	0.71	+0.1
4,153,938	+		AO353_18910	0.72	+0.5
4,153,938	+		AO353_18910	0.72	+1.2
4,153,938	+		AO353_18910	0.72	+0.9
4,153,938	+		AO353_18910	0.72	-0.2
4,153,938	+		AO353_18910	0.72	-0.2
4,153,938	+		AO353_18910	0.72	-0.7
4,153,938	+		AO353_18910	0.72	+0.4
4,153,938	+		AO353_18910	0.72	+0.6
4,153,938	+		AO353_18910	0.72	-1.2
4,153,938	+		AO353_18910	0.72	-0.4
4,153,939	-		AO353_18910	0.72	+1.5
4,153,939	-		AO353_18910	0.72	-1.8
4,153,939	-		AO353_18910	0.72	-0.9
4,153,939	-		AO353_18910	0.72	+0.9
4,153,939	-		AO353_18910	0.72	-1.8
4,153,939	-		AO353_18910	0.72	-0.1
4,153,939	-		AO353_18910	0.72	-1.6
4,153,939	-		AO353_18910	0.72	-1.4
4,153,988	+		AO353_18910	0.75	-0.0
4,153,988	+		AO353_18910	0.75	-1.4
4,153,989	-		AO353_18910	0.75	-2.4
4,153,989	-		AO353_18910	0.75	+0.6
4,153,992	+		AO353_18910	0.76	-1.2
4,153,993	-		AO353_18910	0.76	-1.5
4,154,097	+		AO353_18910	0.83	+0.1
4,154,132	-		AO353_18910	0.86	-3.0
4,154,166	+		AO353_18910	0.88	+1.1
4,154,166	+		AO353_18910	0.88	+2.2
4,154,166	+		AO353_18910	0.88	-0.9
4,154,166	+		AO353_18910	0.88	-0.4
4,154,166	+		AO353_18910	0.88	-2.0
4,154,166	+		AO353_18910	0.88	+3.3
4,154,166	+		AO353_18910	0.88	+2.5
4,154,166	+		AO353_18910	0.88	-1.8
4,154,166	+		AO353_18910	0.88	+1.1
4,154,167	-		AO353_18910	0.88	+1.8
4,154,167	-		AO353_18910	0.88	+0.9
4,154,167	-		AO353_18910	0.88	-1.7
4,154,167	-		AO353_18910	0.88	-1.0
4,154,167	-		AO353_18910	0.88	-0.4
4,154,167	-		AO353_18910	0.88	-0.5
4,154,167	-		AO353_18910	0.88	-1.1
4,154,167	-		AO353_18910	0.88	-0.9
4,154,245	-				+1.1
4,154,245	-				-0.5
4,154,282	+				-0.8
4,154,283	-				-0.2
4,154,394	+				-0.1
4,154,395	-				+1.7
4,154,485	+				-0.9
4,154,486	-				-1.6
4,154,606	+				-0.2
4,154,606	+				-2.2
4,154,607	-				+1.6
4,154,607	-				-0.2
4,154,607	-				+0.2
4,154,607	-				-0.6
4,154,619	+				+0.4
4,154,620	-				-1.5
4,154,630	+				+0.6
4,154,630	+				-3.1
4,154,663	+				+2.1
4,154,663	+				-1.0
4,154,775	+				+1.9
4,154,775	+				-0.7
4,154,775	+				-1.0
4,154,775	+				+0.9
4,154,775	+				+0.4
4,154,775	+				-0.7
4,154,775	+				-0.9
4,154,776	-				+4.3
4,154,776	-				-1.0
4,154,776	-				-1.6
4,154,776	-				+1.8
4,154,776	-				-0.5
4,154,776	-				+2.1
4,154,779	+				+2.6
4,154,779	+				-0.7
4,154,780	-				+2.1
4,154,811	+				-1.4
4,154,811	+				+1.0
4,154,812	-				-1.0
4,154,812	-				-1.6
4,154,812	-				-1.7
4,154,831	+				-1.0
4,154,831	+				-1.4
4,154,831	+				-2.1
4,154,831	+				-1.4
4,154,831	+				+1.0
4,154,832	-				+1.0
4,154,832	-				-0.7
4,154,832	-				-0.2
4,154,832	-				+1.4
4,154,832	-				+0.9
4,154,832	-				+0.1
4,154,832	-				+0.3
4,154,837	+				-0.7
4,154,837	+				-1.7
4,154,838	-				+0.1
4,154,838	-				+0.1
4,154,838	-				-1.2
4,154,900	+				+0.7
4,154,900	+				+0.5
4,154,900	+				+2.4
4,154,900	+				+0.9
4,154,900	+				+0.8
4,154,900	+				-0.5
4,154,900	+				-0.0
4,154,900	+				-1.1
4,154,900	+				+1.9
4,154,900	+				+0.8
4,154,900	+				-0.2
4,154,901	-				-1.3
4,154,901	-				-0.9
4,154,901	-				+1.4
4,154,901	-				-1.6
4,154,903	+				-2.2
4,154,903	+				-0.3
4,154,903	+				+0.4
4,154,903	+				+2.3
4,154,903	+				-1.9
4,154,903	+				-1.5
4,154,903	+				+1.2
4,154,903	+				-0.7
4,154,903	+				+0.2
4,154,904	-				+0.1
4,154,904	-				-0.0
4,154,904	-				+2.8
4,154,904	-				+1.9
4,154,904	-				-0.0
4,155,017	+		AO353_18915	0.12	-1.0
4,155,017	+		AO353_18915	0.12	+0.5
4,155,017	+		AO353_18915	0.12	-0.7
4,155,017	+		AO353_18915	0.12	+1.7
4,155,018	-		AO353_18915	0.12	+0.2
4,155,018	-		AO353_18915	0.12	+0.9
4,155,018	-		AO353_18915	0.12	-1.0
4,155,018	-		AO353_18915	0.12	+1.6
4,155,089	+		AO353_18915	0.16	-1.1
4,155,089	+		AO353_18915	0.16	+0.8
4,155,089	+		AO353_18915	0.16	-2.1
4,155,089	+		AO353_18915	0.16	-1.1
4,155,090	-		AO353_18915	0.16	-1.7
4,155,090	-		AO353_18915	0.16	-0.8
4,155,090	-		AO353_18915	0.16	+0.5
4,155,090	-		AO353_18915	0.16	-0.4
4,155,185	+		AO353_18915	0.21	+1.8
4,155,185	+		AO353_18915	0.21	-0.0
4,155,185	+		AO353_18915	0.21	-1.9
4,155,186	-		AO353_18915	0.21	+0.6
4,155,186	-		AO353_18915	0.21	-0.8
4,155,186	-		AO353_18915	0.21	+0.5
4,155,186	-		AO353_18915	0.21	-0.7
4,155,209	+		AO353_18915	0.23	-0.2
4,155,209	+		AO353_18915	0.23	-1.7
4,155,209	+		AO353_18915	0.23	-1.9
4,155,209	+		AO353_18915	0.23	-1.4
4,155,209	+		AO353_18915	0.23	-0.9
4,155,209	+		AO353_18915	0.23	+0.7
4,155,209	+		AO353_18915	0.23	-2.5
4,155,209	+		AO353_18915	0.23	-1.4
4,155,210	-		AO353_18915	0.23	+0.7
4,155,210	-		AO353_18915	0.23	-1.4
4,155,210	-		AO353_18915	0.23	+1.1
4,155,210	-		AO353_18915	0.23	-1.1
4,155,210	-		AO353_18915	0.23	-1.2