Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18785

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,130,257	+				-2.1
4,130,257	+				-0.9
4,130,257	+				+0.5
4,130,257	+				-0.5
4,130,257	+				-1.9
4,130,257	+				-1.4
4,130,257	+				-1.2
4,130,258	-				-1.2
4,130,258	-				-1.1
4,130,258	-				-0.4
4,130,274	-				-1.6
4,130,305	+				-1.9
4,130,305	+				-0.6
4,130,305	+				-2.3
4,130,305	+				-0.6
4,130,305	+				+0.2
4,130,305	+				-1.8
4,130,306	-				-0.4
4,130,308	+				-0.8
4,130,308	+				-1.4
4,130,309	-				-1.2
4,130,309	-				+4.7
4,130,309	-				-2.8
4,130,315	+				+3.0
4,130,316	-				-1.4
4,130,323	+				+0.2
4,130,323	+				-1.1
4,130,324	-				-0.8
4,130,324	-				-1.4
4,130,324	-				-0.4
4,130,327	+				+0.7
4,130,327	+				-1.2
4,130,327	+				-0.9
4,130,327	+				-1.2
4,130,327	+				-2.2
4,130,327	+				-0.5
4,130,328	-				+0.2
4,130,380	+				+2.4
4,130,380	+				-0.8
4,130,380	+				-0.6
4,130,380	+				-1.8
4,130,380	+				-0.8
4,130,380	+				-2.8
4,130,380	+				+0.0
4,130,381	-				+2.6
4,130,381	-				+1.2
4,130,381	-				-0.4
4,130,391	+				+0.5
4,130,405	+				+8.2
4,130,436	+				-1.6
4,130,483	-				-2.0
4,130,483	-				-2.0
4,130,599	+		AO353_18780	0.22	+0.5
4,130,600	-		AO353_18780	0.22	-0.9
4,130,600	-		AO353_18780	0.22	-1.2
4,130,643	+		AO353_18780	0.27	-0.9
4,130,644	-		AO353_18780	0.27	-2.0
4,130,644	-		AO353_18780	0.27	+0.2
4,130,644	-		AO353_18780	0.27	-1.0
4,130,644	-		AO353_18780	0.27	+0.5
4,130,644	-		AO353_18780	0.27	-1.9
4,130,644	-		AO353_18780	0.27	-2.8
4,130,644	-		AO353_18780	0.27	-1.8
4,130,644	-		AO353_18780	0.27	-1.8
4,130,644	-		AO353_18780	0.27	-1.1
4,130,646	+		AO353_18780	0.28	+1.2
4,130,646	+		AO353_18780	0.28	-2.0
4,130,647	-		AO353_18780	0.28	-1.4
4,130,775	+		AO353_18780	0.43	-1.2
4,130,776	-		AO353_18780	0.43	-2.1
4,130,776	-		AO353_18780	0.43	-0.9
4,130,776	-		AO353_18780	0.43	-0.4
4,130,776	-		AO353_18780	0.43	+0.0
4,130,801	-		AO353_18780	0.46	-0.9
4,130,844	+		AO353_18780	0.51	-0.6
4,130,844	+		AO353_18780	0.51	-0.4
4,130,844	+		AO353_18780	0.51	+1.1
4,130,844	+		AO353_18780	0.51	-1.5
4,130,844	+		AO353_18780	0.51	-2.0
4,130,844	+		AO353_18780	0.51	-0.6
4,130,845	-		AO353_18780	0.52	+0.0
4,130,845	-		AO353_18780	0.52	+0.5
4,130,845	-		AO353_18780	0.52	-0.8
4,130,845	-		AO353_18780	0.52	+0.6
4,130,888	+		AO353_18780	0.57	-1.1
4,131,035	+		AO353_18780	0.74	-0.6
4,131,098	+		AO353_18780	0.82	-1.5
4,131,099	-		AO353_18780	0.82	+0.0
4,131,099	-		AO353_18780	0.82	-0.4
4,131,243	+				+0.1
4,131,243	+				-0.6
4,131,243	+				-0.9
4,131,243	+				+0.6
4,131,244	-				-1.3
4,131,244	-				-1.3
4,131,244	-				-1.3
4,131,244	-				-2.3
4,131,259	+				-0.6
4,131,259	+				-1.1
4,131,269	-				-1.1
4,131,269	-				-1.0
4,131,295	+				-0.9
4,131,296	-				-1.2
4,131,326	+		AO353_18785	0.11	-0.5
4,131,327	-		AO353_18785	0.11	-1.8
4,131,327	-		AO353_18785	0.11	-1.9
4,131,333	+		AO353_18785	0.12	-2.2
4,131,333	+		AO353_18785	0.12	-1.3
4,131,333	+		AO353_18785	0.12	-2.5
4,131,333	+		AO353_18785	0.12	+0.8
4,131,333	+		AO353_18785	0.12	+0.2
4,131,333	+		AO353_18785	0.12	-2.5
4,131,333	+		AO353_18785	0.12	-0.6
4,131,334	-		AO353_18785	0.12	-1.1
4,131,334	-		AO353_18785	0.12	-2.8
4,131,334	-		AO353_18785	0.12	-1.6
4,131,341	-		AO353_18785	0.13	-2.4
4,131,341	-		AO353_18785	0.13	-2.4
4,131,430	+		AO353_18785	0.25	-1.3
4,131,431	-		AO353_18785	0.25	-1.2
4,131,431	-		AO353_18785	0.25	-0.4
4,131,431	-		AO353_18785	0.25	-2.6
4,131,463	+		AO353_18785	0.30	-0.4
4,131,463	+		AO353_18785	0.30	-3.1
4,131,463	+		AO353_18785	0.30	-1.9
4,131,464	-		AO353_18785	0.30	-2.7
4,131,464	-		AO353_18785	0.30	-3.5
4,131,464	-		AO353_18785	0.30	-1.1
4,131,533	+		AO353_18785	0.39	-1.5
4,131,534	-		AO353_18785	0.39	-0.9
4,131,543	+		AO353_18785	0.40	-1.0
4,131,544	-		AO353_18785	0.40	-1.9
4,131,582	+		AO353_18785	0.46	-1.8
4,131,583	-		AO353_18785	0.46	+0.0
4,131,600	+		AO353_18785	0.48	-1.3
4,131,646	+		AO353_18785	0.54	-2.3
4,131,646	+		AO353_18785	0.54	-0.2
4,131,646	+		AO353_18785	0.54	-2.1
4,131,647	-		AO353_18785	0.54	-0.6
4,131,647	-		AO353_18785	0.54	-3.0
4,131,647	-		AO353_18785	0.54	-1.4
4,131,853	+		AO353_18785	0.82	-0.5
4,131,853	+		AO353_18785	0.82	-0.4
4,131,853	+		AO353_18785	0.82	-0.8
4,131,854	-		AO353_18785	0.82	-1.1
4,131,854	-		AO353_18785	0.82	+0.3
4,131,856	+		AO353_18785	0.83	+0.8
4,131,857	-		AO353_18785	0.83	-2.7
4,131,857	-		AO353_18785	0.83	-0.9
4,131,926	+				-2.1
4,131,926	+				-0.5
4,131,927	-				-1.3
4,131,927	-				-1.0
4,131,927	-				-0.4
4,131,927	-				-1.9
4,131,927	-				-3.7
4,132,118	+				-1.1
4,132,118	+				+2.0
4,132,118	+				-1.1
4,132,119	-				-2.0
4,132,119	-				-1.5
4,132,119	-				-2.5
4,132,197	+		AO353_18790	0.15	-2.7
4,132,197	+		AO353_18790	0.15	-1.6
4,132,197	+		AO353_18790	0.15	-1.2
4,132,197	+		AO353_18790	0.15	-1.7
4,132,198	-		AO353_18790	0.15	-0.7
4,132,252	+				+0.5
4,132,252	+		AO353_18790	0.29	-3.0
4,132,253	-		AO353_18790	0.30	-2.0
4,132,444	-		AO353_18790	0.79	-0.8
4,132,444	-		AO353_18790	0.79	+2.7
4,132,452	-		AO353_18790	0.82	+2.0
4,132,452	-		AO353_18790	0.82	-1.3
4,132,503	+				-0.5
4,132,504	-				-0.6
4,132,553	+				-0.8
4,132,554	-				+1.2
4,132,554	-				+0.1
4,132,554	-				-1.4
4,132,554	-				+0.5
4,132,554	-				-1.5
4,132,701	+		AO353_18795	0.19	+2.1
4,132,702	-		AO353_18795	0.19	-3.1
4,132,824	+		AO353_18795	0.34	-0.4
4,132,824	+		AO353_18795	0.34	-1.6
4,132,824	+		AO353_18795	0.34	-0.3
4,132,824	+		AO353_18795	0.34	-1.1
4,132,824	+		AO353_18795	0.34	+0.8
4,132,824	+		AO353_18795	0.34	-1.1
4,132,824	+		AO353_18795	0.34	-0.5
4,132,825	-		AO353_18795	0.34	+0.2
4,132,825	-		AO353_18795	0.34	-3.3
4,132,825	-		AO353_18795	0.34	-0.6
4,132,825	-		AO353_18795	0.34	-1.4
4,132,825	-		AO353_18795	0.34	+0.8
4,132,825	-		AO353_18795	0.34	-1.0
4,132,825	-		AO353_18795	0.34	-1.5
4,132,883	+		AO353_18795	0.42	-1.5