Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18615

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,094,244	+		AO353_18610	0.37	-2.2
4,094,244	+		AO353_18610	0.37	-1.8
4,094,244	+		AO353_18610	0.37	-0.8
4,094,245	-		AO353_18610	0.37	-0.8
4,094,245	-		AO353_18610	0.37	+0.2
4,094,245	-		AO353_18610	0.37	-1.6
4,094,312	+		AO353_18610	0.43	-0.9
4,094,550	+		AO353_18610	0.65	-0.9
4,094,550	+		AO353_18610	0.65	-1.1
4,094,550	+		AO353_18610	0.65	-1.9
4,094,550	+		AO353_18610	0.65	-1.0
4,094,550	+		AO353_18610	0.65	+0.5
4,094,550	+		AO353_18610	0.65	-0.2
4,094,551	-		AO353_18610	0.65	-0.8
4,094,551	-		AO353_18610	0.65	+1.0
4,094,630	+		AO353_18610	0.72	-0.2
4,094,819	+		AO353_18610	0.89	-1.1
4,094,820	-		AO353_18610	0.89	-2.4
4,094,943	+				-2.1
4,094,943	+				+1.2
4,095,001	+				-0.2
4,095,001	+				-0.4
4,095,001	+				+1.6
4,095,002	-				-1.7
4,095,002	-				-2.4
4,095,002	-				-1.0
4,095,002	-				-1.6
4,095,021	+				-1.7
4,095,181	+		AO353_18615	0.18	-0.8
4,095,193	+		AO353_18615	0.19	-0.7
4,095,193	+		AO353_18615	0.19	-0.6
4,095,193	+		AO353_18615	0.19	-2.3
4,095,193	+		AO353_18615	0.19	-3.2
4,095,193	+		AO353_18615	0.19	-1.3
4,095,194	-		AO353_18615	0.19	-1.9
4,095,194	-		AO353_18615	0.19	+0.0
4,095,194	-		AO353_18615	0.19	-2.7
4,095,194	-		AO353_18615	0.19	-3.0
4,095,347	+		AO353_18615	0.30	-0.2
4,095,347	+		AO353_18615	0.30	-0.5
4,095,700	+		AO353_18615	0.58	-1.5
4,095,700	+		AO353_18615	0.58	-1.4
4,095,700	+		AO353_18615	0.58	-1.2
4,095,700	+		AO353_18615	0.58	-0.9
4,095,700	+		AO353_18615	0.58	-1.1
4,095,700	+		AO353_18615	0.58	-0.6
4,095,701	-		AO353_18615	0.58	-1.0
4,095,701	-		AO353_18615	0.58	+0.0
4,095,701	-		AO353_18615	0.58	+1.7
4,095,701	-		AO353_18615	0.58	-0.2
4,095,774	+		AO353_18615	0.63	+2.1
4,095,774	+		AO353_18615	0.63	-2.2
4,095,774	+		AO353_18615	0.63	-2.1
4,095,775	-		AO353_18615	0.63	+1.9
4,095,775	-		AO353_18615	0.63	-1.6
4,095,775	-		AO353_18615	0.63	-1.9
4,095,775	-		AO353_18615	0.63	-0.6
4,095,775	-		AO353_18615	0.63	-1.9
4,095,830	-		AO353_18615	0.68	-2.2
4,095,830	-		AO353_18615	0.68	-3.2
4,095,867	+		AO353_18615	0.71	-1.1
4,095,868	-		AO353_18615	0.71	-0.3
4,095,906	+		AO353_18615	0.74	-2.6
4,095,906	+		AO353_18615	0.74	-2.3
4,095,907	-		AO353_18615	0.74	+0.0
4,096,018	+		AO353_18615	0.82	-2.0
4,096,018	+		AO353_18615	0.82	-0.9
4,096,018	+		AO353_18615	0.82	-2.5
4,096,019	-		AO353_18615	0.82	+0.9
4,096,019	-		AO353_18615	0.82	-1.3
4,096,019	-		AO353_18615	0.82	-1.7
4,096,019	-		AO353_18615	0.82	-2.5
4,096,027	+		AO353_18615	0.83	-1.2
4,096,027	+		AO353_18615	0.83	+0.8
4,096,027	+		AO353_18615	0.83	-1.9
4,096,027	+		AO353_18615	0.83	-3.1
4,096,027	+		AO353_18615	0.83	-2.2
4,096,028	-		AO353_18615	0.83	-1.9
4,096,028	-		AO353_18615	0.83	-0.3
4,096,028	-		AO353_18615	0.83	-0.7
4,096,028	-		AO353_18615	0.83	-3.0
4,096,072	-		AO353_18615	0.86	+0.0
4,096,072	-		AO353_18615	0.86	+0.8
4,096,121	+				-1.2
4,096,122	-				-1.9
4,096,144	+				-2.1
4,096,162	+				-3.1
4,096,185	-				-1.0
4,096,185	-				-2.0
4,096,185	-				-1.0
4,096,213	+				-1.7
4,096,213	+				-0.7
4,096,213	+				+0.8
4,096,214	-				-2.9
4,096,214	-				-2.3
4,096,214	-				-0.5
4,096,214	-				-1.0
4,096,214	-				-0.2
4,096,244	+				-1.1
4,096,244	+				+3.2
4,096,245	-				-2.3
4,096,246	+				+1.9
4,096,246	+				-2.6
4,096,246	+				-1.4
4,096,246	+				-2.2
4,096,246	+				-0.8
4,096,246	+				-2.1
4,096,246	+				-0.3
4,096,246	+				-0.3
4,096,247	-				-3.6
4,096,247	-				-3.0
4,096,247	-				-2.3
4,096,247	-				-0.8
4,096,247	-				-1.8
4,096,247	-				-2.0
4,096,247	-				+0.0
4,096,247	-				-2.8
4,096,247	-				-0.9
4,096,252	+				-0.6
4,096,252	+				-0.5
4,096,252	+				+1.6
4,096,252	+				-0.6
4,096,252	+				-1.3
4,096,253	-				-1.2
4,096,253	-				-1.6
4,096,253	-				-0.8
4,096,253	-				-0.2
4,096,253	-				-0.3
4,096,257	+				-0.5
4,096,257	+				+0.1
4,096,257	+				+0.8
4,096,257	+				+2.4
4,096,257	+				-0.8
4,096,257	+				-0.9
4,096,257	+				+0.6
4,096,257	+				-2.0
4,096,257	+				-1.5
4,096,257	+				+1.8
4,096,257	+				+1.1
4,096,257	+				+1.4
4,096,257	+				+0.6
4,096,257	+				-0.6
4,096,257	+				-2.0
4,096,257	+				+2.5
4,096,257	+				+2.0
4,096,257	+				-0.9
4,096,257	+				+1.8
4,096,257	+				+0.5
4,096,258	-				+1.7
4,096,258	-				+2.9
4,096,258	-				-2.0
4,096,258	-				-0.9
4,096,258	-				-0.8
4,096,258	-				-2.7
4,096,258	-				-3.4
4,096,258	-				-1.3
4,096,258	-				-1.7
4,096,258	-				-0.5
4,096,258	-				-0.8
4,096,258	-				-2.9
4,096,258	-				-1.3
4,096,258	-				-1.5
4,096,258	-				+1.7
4,096,258	-				-1.3
4,096,258	-				-1.4
4,096,258	-				-1.3
4,096,258	-				-1.1
4,096,258	-				-0.6
4,096,258	-				-2.3
4,096,259	+				+1.2
4,096,259	+				-1.6
4,096,259	+				+2.8
4,096,259	+				+0.4
4,096,260	-				+1.1
4,096,260	-				-0.8
4,096,260	-				-1.3
4,096,260	-				-3.5
4,096,260	-				-2.1
4,096,260	-				-1.6
4,096,423	+				-0.8
4,096,423	+				-2.0
4,096,423	+				-3.2
4,096,423	+				-2.8
4,096,423	+				+0.0
4,096,423	+				-1.5
4,096,424	-				+1.2
4,096,424	-				-0.5
4,096,424	-				-0.6
4,096,424	-				-1.3
4,096,424	-				-0.6
4,096,467	+				-1.5
4,096,467	+				-0.0
4,096,467	+				-1.6
4,096,467	+				+0.0
4,096,467	+				-0.5
4,096,467	+				-1.1
4,096,467	+				+0.4
4,096,468	-				-2.0
4,096,468	-				-1.7
4,096,468	-				-1.9
4,096,468	-				-3.0
4,096,468	-				-2.3
4,096,468	-				-2.1
4,096,468	-				-1.9
4,096,468	-				+0.2
4,096,468	-				-1.9
4,096,468	-				-3.4
4,096,468	-				-1.3
4,096,470	-				-2.6
4,096,470	-				-1.0
4,096,476	+		AO353_18620	0.10	-1.4
4,096,477	-		AO353_18620	0.10	-2.0
4,096,477	-		AO353_18620	0.10	-0.5
4,096,510	+		AO353_18620	0.12	-2.4
4,096,511	-		AO353_18620	0.12	+0.2
4,096,514	+		AO353_18620	0.12	-0.2
4,096,514	+		AO353_18620	0.12	-1.7
4,096,515	-		AO353_18620	0.12	-3.5
4,096,515	-		AO353_18620	0.12	-1.6
4,096,515	-		AO353_18620	0.12	-0.6
4,096,515	-		AO353_18620	0.12	-0.9
4,096,530	+		AO353_18620	0.13	-2.8
4,096,530	+		AO353_18620	0.13	-2.0
4,096,530	+		AO353_18620	0.13	+0.6
4,096,530	+		AO353_18620	0.13	-1.3
4,096,530	+		AO353_18620	0.13	-0.2
4,096,530	+		AO353_18620	0.13	-0.8
4,096,530	+		AO353_18620	0.13	-2.9
4,096,530	+		AO353_18620	0.13	+0.0
4,096,530	+		AO353_18620	0.13	-1.6
4,096,530	+		AO353_18620	0.13	-1.8
4,096,531	-		AO353_18620	0.13	-2.3
4,096,531	-		AO353_18620	0.13	-2.6
4,096,531	-		AO353_18620	0.13	-1.6
4,096,721	+		AO353_18620	0.22	-2.6
4,096,721	+		AO353_18620	0.22	+0.2
4,096,721	+		AO353_18620	0.22	-0.4
4,096,721	+		AO353_18620	0.22	+0.8
4,096,722	-		AO353_18620	0.22	-1.3
4,096,722	-		AO353_18620	0.22	+0.5
4,096,722	-		AO353_18620	0.22	-0.4
4,096,737	+		AO353_18620	0.23	+0.5
4,096,737	+		AO353_18620	0.23	+1.0
4,096,737	+		AO353_18620	0.23	-1.9
4,096,737	+		AO353_18620	0.23	-1.5
4,096,737	+		AO353_18620	0.23	-0.4
4,096,737	+		AO353_18620	0.23	-2.7
4,096,737	+		AO353_18620	0.23	-0.4
4,096,737	-		AO353_18620	0.23	-3.0
4,096,738	-		AO353_18620	0.23	-0.1
4,096,738	-		AO353_18620	0.23	-0.8
4,096,738	-		AO353_18620	0.23	-1.8
4,096,738	-		AO353_18620	0.23	-2.2
4,096,738	-		AO353_18620	0.23	+0.8
4,096,738	-		AO353_18620	0.23	+0.5
4,096,738	-		AO353_18620	0.23	-1.4
4,096,738	-		AO353_18620	0.23	-1.6
4,096,738	-		AO353_18620	0.23	-0.5
4,096,738	-		AO353_18620	0.23	-0.4
4,096,778	+		AO353_18620	0.25	-1.4
4,096,779	-		AO353_18620	0.25	-2.4
4,096,803	+		AO353_18620	0.26	-1.1
4,096,803	+		AO353_18620	0.26	-2.4
4,096,803	+		AO353_18620	0.26	+0.2
4,096,803	+		AO353_18620	0.26	-0.6
4,096,803	+		AO353_18620	0.26	-0.2
4,096,804	-		AO353_18620	0.26	-1.2
4,096,826	+		AO353_18620	0.28	-2.4
4,096,827	-		AO353_18620	0.28	+0.5
4,096,827	-		AO353_18620	0.28	-0.8
4,096,827	-		AO353_18620	0.28	-2.3
4,096,827	-		AO353_18620	0.28	-3.4
4,096,827	-		AO353_18620	0.28	-0.3
4,096,827	-		AO353_18620	0.28	-0.6
4,096,827	-		AO353_18620	0.28	-1.0
4,096,827	-		AO353_18620	0.28	-1.2
4,096,832	+		AO353_18620	0.28	-2.0
4,096,832	+		AO353_18620	0.28	-1.0
4,096,833	-		AO353_18620	0.28	+0.4
4,096,833	-		AO353_18620	0.28	+1.8
4,096,897	+		AO353_18620	0.31	-2.1
4,096,897	+		AO353_18620	0.31	-1.1
4,096,897	+		AO353_18620	0.31	-1.5
4,096,898	-		AO353_18620	0.31	-0.4
4,096,932	+		AO353_18620	0.33	-2.5
4,096,932	+		AO353_18620	0.33	-1.1
4,096,933	-		AO353_18620	0.33	-0.6
4,096,933	-		AO353_18620	0.33	-1.4
4,096,933	-		AO353_18620	0.33	+0.2
4,096,937	+		AO353_18620	0.33	-1.2
4,096,937	+		AO353_18620	0.33	-2.0
4,096,937	+		AO353_18620	0.33	-1.5
4,096,937	+		AO353_18620	0.33	-1.4
4,096,938	-		AO353_18620	0.33	-0.2
4,096,938	-		AO353_18620	0.33	-0.4
4,096,941	+		AO353_18620	0.33	-1.4
4,096,941	+		AO353_18620	0.33	-2.7
4,096,941	+		AO353_18620	0.33	-0.5
4,096,941	+		AO353_18620	0.33	-0.4
4,096,941	+		AO353_18620	0.33	-0.5
4,096,941	+		AO353_18620	0.33	-2.8
4,096,941	+		AO353_18620	0.33	-1.3
4,096,941	+		AO353_18620	0.33	+0.5
4,096,941	+		AO353_18620	0.33	-1.4
4,096,941	+		AO353_18620	0.33	-0.4
4,096,941	+		AO353_18620	0.33	-3.5
4,096,941	+		AO353_18620	0.33	-1.0
4,096,941	+		AO353_18620	0.33	-1.9
4,096,941	+		AO353_18620	0.33	-1.3
4,096,941	+		AO353_18620	0.33	-2.0
4,096,941	+		AO353_18620	0.33	-1.0
4,096,941	+		AO353_18620	0.33	-1.5
4,096,941	+		AO353_18620	0.33	-3.6
4,096,941	+		AO353_18620	0.33	-1.6
4,096,941	+		AO353_18620	0.33	-2.5
4,096,941	+		AO353_18620	0.33	-0.9
4,096,941	+		AO353_18620	0.33	-1.0
4,096,941	+		AO353_18620	0.33	+0.9
4,096,941	+		AO353_18620	0.33	-3.4
4,096,941	+		AO353_18620	0.33	+0.0
4,096,941	+		AO353_18620	0.33	-1.4
4,096,941	+		AO353_18620	0.33	-0.2
4,096,941	+		AO353_18620	0.33	+1.2
4,096,942	-		AO353_18620	0.33	+1.5
4,096,942	-		AO353_18620	0.33	+1.6
4,096,942	-		AO353_18620	0.33	-1.1
4,096,942	-		AO353_18620	0.33	-2.3
4,096,942	-		AO353_18620	0.33	-3.1
4,096,942	-		AO353_18620	0.33	-1.2
4,096,942	-		AO353_18620	0.33	-2.4
4,096,942	-		AO353_18620	0.33	-1.1
4,096,942	-		AO353_18620	0.33	-1.9
4,096,942	-		AO353_18620	0.33	-1.9
4,096,942	-		AO353_18620	0.33	-1.4
4,096,942	-		AO353_18620	0.33	-0.5
4,096,942	-		AO353_18620	0.33	-2.9
4,096,942	-		AO353_18620	0.33	+0.2
4,096,942	-		AO353_18620	0.33	-0.8
4,096,942	-		AO353_18620	0.33	-0.1
4,096,942	-		AO353_18620	0.33	-0.8
4,096,942	-		AO353_18620	0.33	+1.2
4,096,942	-		AO353_18620	0.33	-1.7
4,096,942	-		AO353_18620	0.33	-1.6
4,096,942	-		AO353_18620	0.33	+0.0
4,096,944	-		AO353_18620	0.33	-2.9
4,096,944	-		AO353_18620	0.33	+0.8
4,096,944	-		AO353_18620	0.33	-0.6
4,097,000	+		AO353_18620	0.36	-2.6
4,097,000	+		AO353_18620	0.36	-2.0
4,097,000	+		AO353_18620	0.36	+0.2
4,097,000	+		AO353_18620	0.36	-1.0
4,097,243	+		AO353_18620	0.48	-2.4
4,097,243	+		AO353_18620	0.48	+0.0