Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15220

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,364,304	+		AO353_15215	0.18	+0.7
3,364,305	-		AO353_15215	0.18	+2.9
3,364,305	-		AO353_15215	0.18	+1.8
3,364,305	-		AO353_15215	0.18	-2.1
3,364,392	+		AO353_15215	0.27	-0.4
3,364,392	+		AO353_15215	0.27	+1.8
3,364,392	+		AO353_15215	0.27	+0.5
3,364,392	+		AO353_15215	0.27	-0.7
3,364,392	+		AO353_15215	0.27	-1.6
3,364,392	+		AO353_15215	0.27	+0.5
3,364,392	+		AO353_15215	0.27	-1.0
3,364,392	+		AO353_15215	0.27	+3.9
3,364,392	+		AO353_15215	0.27	+1.1
3,364,392	+		AO353_15215	0.27	-1.0
3,364,392	+		AO353_15215	0.27	+0.2
3,364,392	+		AO353_15215	0.27	+1.3
3,364,393	-		AO353_15215	0.27	-0.8
3,364,393	-		AO353_15215	0.27	-0.4
3,364,393	-		AO353_15215	0.27	-1.3
3,364,393	-		AO353_15215	0.27	+0.2
3,364,393	-		AO353_15215	0.27	+1.4
3,364,393	-		AO353_15215	0.27	+1.1
3,364,393	-		AO353_15215	0.27	-1.1
3,364,393	-		AO353_15215	0.27	-0.9
3,364,393	-		AO353_15215	0.27	+1.7
3,364,393	-		AO353_15215	0.27	+0.7
3,364,393	-		AO353_15215	0.27	-0.4
3,364,393	-		AO353_15215	0.27	-2.6
3,364,393	-		AO353_15215	0.27	+2.2
3,364,462	+		AO353_15215	0.34	+0.3
3,364,462	+		AO353_15215	0.34	+2.6
3,364,462	+		AO353_15215	0.34	+1.1
3,364,462	+		AO353_15215	0.34	-0.8
3,364,462	+		AO353_15215	0.34	-0.5
3,364,463	-		AO353_15215	0.34	-0.5
3,364,463	-		AO353_15215	0.34	-0.6
3,364,463	-		AO353_15215	0.34	-0.7
3,364,545	+		AO353_15215	0.43	-0.7
3,364,560	+		AO353_15215	0.44	-1.0
3,364,636	+		AO353_15215	0.52	-1.3
3,364,636	+		AO353_15215	0.52	-1.6
3,364,637	-		AO353_15215	0.52	+0.3
3,364,637	-		AO353_15215	0.52	-1.0
3,364,637	-		AO353_15215	0.52	+0.1
3,364,669	+		AO353_15215	0.56	+0.9
3,364,669	+		AO353_15215	0.56	-1.9
3,364,669	+		AO353_15215	0.56	+1.0
3,364,669	+		AO353_15215	0.56	+2.6
3,364,670	-		AO353_15215	0.56	-0.3
3,364,670	-		AO353_15215	0.56	-2.0
3,364,670	-		AO353_15215	0.56	+0.9
3,364,670	-		AO353_15215	0.56	-0.4
3,364,670	-		AO353_15215	0.56	+1.5
3,364,785	-		AO353_15215	0.68	-0.7
3,364,830	-		AO353_15215	0.72	+0.4
3,364,884	+		AO353_15215	0.78	-0.8
3,364,885	-		AO353_15215	0.78	-0.6
3,364,921	+		AO353_15215	0.82	-0.2
3,364,921	+		AO353_15215	0.82	-0.7
3,364,921	+		AO353_15215	0.82	-2.2
3,364,921	+		AO353_15215	0.82	-1.2
3,364,921	+		AO353_15215	0.82	+1.6
3,364,921	+		AO353_15215	0.82	+0.3
3,364,921	+		AO353_15215	0.82	+2.2
3,364,921	+		AO353_15215	0.82	-0.9
3,364,921	+		AO353_15215	0.82	+2.0
3,364,921	+		AO353_15215	0.82	-1.4
3,364,921	+		AO353_15215	0.82	+0.5
3,364,921	+		AO353_15215	0.82	+1.3
3,364,921	+		AO353_15215	0.82	+0.4
3,364,921	+		AO353_15215	0.82	-1.6
3,364,922	-		AO353_15215	0.82	-1.1
3,364,922	-		AO353_15215	0.82	-0.1
3,364,922	-		AO353_15215	0.82	-0.0
3,364,922	-		AO353_15215	0.82	+0.4
3,364,922	-		AO353_15215	0.82	+1.0
3,364,922	-		AO353_15215	0.82	-1.6
3,364,922	-		AO353_15215	0.82	-1.9
3,364,922	-		AO353_15215	0.82	-0.5
3,364,922	-		AO353_15215	0.82	+0.2
3,364,922	-		AO353_15215	0.82	+0.8
3,364,922	-		AO353_15215	0.82	-1.6
3,364,922	-		AO353_15215	0.82	+0.2
3,364,922	-		AO353_15215	0.82	-1.3
3,364,922	-		AO353_15215	0.82	-0.2
3,365,071	+				-1.0
3,365,161	+				+0.2
3,365,263	+		AO353_15220	0.10	+0.2
3,365,263	+		AO353_15220	0.10	+0.8
3,365,263	+		AO353_15220	0.10	+0.7
3,365,263	+		AO353_15220	0.10	-0.1
3,365,263	+		AO353_15220	0.10	-2.9
3,365,264	-		AO353_15220	0.10	-1.3
3,365,264	-		AO353_15220	0.10	-0.5
3,365,264	-		AO353_15220	0.10	+0.4
3,365,264	-		AO353_15220	0.10	+1.6
3,365,264	-		AO353_15220	0.10	-2.3
3,365,338	+		AO353_15220	0.18	+0.7
3,365,338	+		AO353_15220	0.18	-1.4
3,365,338	+		AO353_15220	0.18	-0.7
3,365,338	+		AO353_15220	0.18	-0.7
3,365,338	+		AO353_15220	0.18	-0.8
3,365,530	+		AO353_15220	0.37	+2.2
3,365,530	+		AO353_15220	0.37	-0.4
3,365,531	-		AO353_15220	0.37	-0.2
3,365,531	-		AO353_15220	0.37	-0.4
3,365,548	+		AO353_15220	0.39	-0.7
3,365,548	+		AO353_15220	0.39	-2.4
3,365,549	-		AO353_15220	0.39	-0.8
3,365,549	-		AO353_15220	0.39	-1.4
3,365,549	-		AO353_15220	0.39	-1.6
3,365,549	-		AO353_15220	0.39	-2.3
3,365,608	+		AO353_15220	0.45	+0.4
3,365,608	+		AO353_15220	0.45	-0.4
3,365,609	-		AO353_15220	0.45	-0.5
3,365,609	-		AO353_15220	0.45	+0.5
3,365,609	-		AO353_15220	0.45	+1.2
3,365,609	-		AO353_15220	0.45	+1.9
3,365,609	-		AO353_15220	0.45	+1.4
3,365,609	-		AO353_15220	0.45	+2.3
3,365,614	+		AO353_15220	0.46	-1.7
3,365,614	+		AO353_15220	0.46	-2.3
3,365,614	+		AO353_15220	0.46	-0.1
3,365,614	+		AO353_15220	0.46	+1.0
3,365,615	-		AO353_15220	0.46	-0.6
3,365,615	-		AO353_15220	0.46	+1.2
3,365,615	-		AO353_15220	0.46	-1.5
3,365,650	+		AO353_15220	0.49	+0.2
3,365,651	-		AO353_15220	0.49	+1.0
3,365,651	-		AO353_15220	0.49	+3.1
3,365,651	-		AO353_15220	0.49	+0.2
3,365,737	+		AO353_15220	0.58	+0.2
3,365,737	+		AO353_15220	0.58	+0.5
3,365,737	+		AO353_15220	0.58	-0.8
3,365,738	-		AO353_15220	0.58	-0.7
3,365,738	-		AO353_15220	0.58	-0.6
3,365,738	-		AO353_15220	0.58	+0.6
3,365,738	-		AO353_15220	0.58	-0.2
3,365,738	-		AO353_15220	0.58	-0.0
3,366,086	+				-1.2
3,366,086	+				-0.6
3,366,086	+				+2.1
3,366,087	-				+1.7
3,366,087	-				+0.3
3,366,087	-				-1.5
3,366,155	+				-0.7
3,366,155	+				+0.5
3,366,155	+				+0.5
3,366,155	+				-1.8
3,366,155	+				-0.0
3,366,155	+				-2.4
3,366,155	+				+1.5
3,366,156	-				-1.5
3,366,156	-				-0.2
3,366,156	-				-0.6
3,366,156	-				-1.2
3,366,156	-				+0.1
3,366,156	-				+0.6
3,366,156	-				-1.9
3,366,156	-				+1.5
3,366,156	-				-0.7
3,366,156	-				-2.6
3,366,156	-				-0.4
3,366,156	-				-1.4
3,366,156	-				-0.7
3,366,156	-				+2.9
3,366,156	-				-1.4
3,366,156	-				-2.3
3,366,164	+				-0.7
3,366,165	-				+0.3
3,366,170	+				+0.4
3,366,170	+				-2.1
3,366,170	+				-1.0
3,366,170	+				+2.8
3,366,170	+				+0.1
3,366,171	-				-1.6
3,366,171	-				+0.4
3,366,171	-				-0.2
3,366,172	+				-0.9
3,366,172	+				-0.7
3,366,207	+				+1.6
3,366,208	-				+2.0
3,366,253	+				+1.6
3,366,253	+				-1.2
3,366,253	+				-0.2
3,366,253	+				-0.4
3,366,253	+				+0.7
3,366,253	+				+0.1
3,366,254	-				-0.4
3,366,254	-				+0.9
3,366,254	-				+1.0
3,366,254	-				-1.2
3,366,254	-				+0.2
3,366,254	-				-1.1
3,366,352	+				+0.4
3,366,352	+				+3.3
3,366,352	+				-0.6
3,366,353	-				-1.2
3,366,353	-				-0.7
3,366,413	+				+0.4
3,366,414	-		AO353_15225	0.10	-1.8
3,366,414	-		AO353_15225	0.10	+1.5
3,366,481	-		AO353_15225	0.16	-1.8
3,366,507	+		AO353_15225	0.18	-1.2
3,366,508	-		AO353_15225	0.18	-0.7
3,366,591	+		AO353_15225	0.26	-0.5
3,366,591	+		AO353_15225	0.26	-0.2
3,366,591	+		AO353_15225	0.26	-2.6
3,366,591	+		AO353_15225	0.26	-1.3
3,366,591	+		AO353_15225	0.26	-3.5
3,366,591	+		AO353_15225	0.26	+1.3
3,366,591	+		AO353_15225	0.26	+0.4
3,366,591	+		AO353_15225	0.26	-0.5
3,366,592	-		AO353_15225	0.26	-1.0
3,366,592	-		AO353_15225	0.26	-0.1
3,366,592	-		AO353_15225	0.26	-1.4
3,366,604	-		AO353_15225	0.27	-0.9
3,366,604	-		AO353_15225	0.27	-1.8
3,366,630	+		AO353_15225	0.29	-2.1
3,366,630	+		AO353_15225	0.29	-2.4
3,366,630	+		AO353_15225	0.29	-0.2
3,366,630	+		AO353_15225	0.29	+1.2
3,366,630	+		AO353_15225	0.29	+2.0
3,366,631	-		AO353_15225	0.29	-2.3
3,366,631	-		AO353_15225	0.29	-0.7
3,366,631	-		AO353_15225	0.29	+1.4
3,366,662	+		AO353_15225	0.32	-0.4
3,366,663	-		AO353_15225	0.32	+1.7
3,366,744	+		AO353_15225	0.39	-1.1
3,366,744	+		AO353_15225	0.39	-0.8
3,366,744	+		AO353_15225	0.39	+1.6
3,366,744	+		AO353_15225	0.39	-0.2
3,366,744	+		AO353_15225	0.39	+2.7
3,366,745	-		AO353_15225	0.39	-0.6
3,367,002	+		AO353_15225	0.62	+0.2
3,367,003	-		AO353_15225	0.62	-0.5
3,367,003	-		AO353_15225	0.62	+0.6
3,367,092	+		AO353_15225	0.70	+1.5
3,367,093	-		AO353_15225	0.70	-0.4
3,367,093	-		AO353_15225	0.70	+2.4