Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14855

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,287,334	+		AO353_14850	0.30	+0.2
3,287,334	+		AO353_14850	0.30	+0.9
3,287,334	+		AO353_14850	0.30	-1.2
3,287,334	+		AO353_14850	0.30	+0.5
3,287,334	+		AO353_14850	0.30	+1.6
3,287,334	+		AO353_14850	0.30	-1.5
3,287,334	+		AO353_14850	0.30	-1.0
3,287,334	+		AO353_14850	0.30	-0.8
3,287,334	+		AO353_14850	0.30	-1.5
3,287,335	-		AO353_14850	0.30	-1.2
3,287,335	-		AO353_14850	0.30	-0.1
3,287,335	-		AO353_14850	0.30	-1.3
3,287,335	-		AO353_14850	0.30	+0.5
3,287,335	-		AO353_14850	0.30	-1.4
3,287,335	-		AO353_14850	0.30	+0.6
3,287,335	-		AO353_14850	0.30	+0.9
3,287,335	-		AO353_14850	0.30	+1.2
3,287,335	-		AO353_14850	0.30	-0.5
3,287,373	+		AO353_14850	0.33	+0.5
3,287,373	+		AO353_14850	0.33	-1.2
3,287,373	+		AO353_14850	0.33	+0.7
3,287,374	-		AO353_14850	0.33	-1.8
3,287,374	-		AO353_14850	0.33	-2.1
3,287,374	-		AO353_14850	0.33	+0.5
3,287,374	-		AO353_14850	0.33	-0.8
3,287,374	-		AO353_14850	0.33	+1.4
3,287,374	-		AO353_14850	0.33	+0.4
3,287,374	-		AO353_14850	0.33	-1.2
3,287,383	+		AO353_14850	0.34	-1.1
3,287,383	+		AO353_14850	0.34	-1.9
3,287,383	+		AO353_14850	0.34	-0.9
3,287,383	+		AO353_14850	0.34	-0.6
3,287,384	-		AO353_14850	0.34	+1.9
3,287,384	-		AO353_14850	0.34	-0.2
3,287,384	-		AO353_14850	0.34	+0.5
3,287,466	+		AO353_14850	0.40	+1.4
3,287,467	-		AO353_14850	0.40	-1.2
3,287,510	-		AO353_14850	0.44	+0.6
3,287,669	+		AO353_14850	0.56	-1.9
3,287,670	-		AO353_14850	0.56	+1.7
3,287,720	+		AO353_14850	0.60	-1.5
3,287,720	+		AO353_14850	0.60	+0.2
3,287,720	+		AO353_14850	0.60	-1.5
3,287,938	+		AO353_14850	0.77	+1.3
3,287,938	+		AO353_14850	0.77	+0.5
3,287,938	+		AO353_14850	0.77	-0.3
3,287,938	+		AO353_14850	0.77	+1.7
3,287,938	+		AO353_14850	0.77	+1.6
3,287,938	+		AO353_14850	0.77	-1.4
3,287,939	-		AO353_14850	0.77	-0.3
3,287,939	-		AO353_14850	0.77	+0.8
3,287,939	-		AO353_14850	0.77	-2.0
3,287,939	-		AO353_14850	0.77	-2.4
3,287,940	+		AO353_14850	0.77	-0.9
3,287,940	+		AO353_14850	0.77	-0.0
3,287,941	-		AO353_14850	0.77	-0.7
3,287,941	-		AO353_14850	0.77	+0.8
3,288,131	-				-0.6
3,288,296	+		AO353_14855	0.10	-1.1
3,288,297	-		AO353_14855	0.10	-2.0
3,288,297	-		AO353_14855	0.10	-0.2
3,288,297	-		AO353_14855	0.10	+1.8
3,288,297	-		AO353_14855	0.10	+1.5
3,288,297	-		AO353_14855	0.10	-1.3
3,288,297	-		AO353_14855	0.10	-0.8
3,288,335	+		AO353_14855	0.16	+0.3
3,288,335	+		AO353_14855	0.16	+0.7
3,288,335	+		AO353_14855	0.16	+1.5
3,288,335	+		AO353_14855	0.16	+1.1
3,288,335	+		AO353_14855	0.16	-0.2
3,288,335	+		AO353_14855	0.16	-0.7
3,288,336	-		AO353_14855	0.16	-0.6
3,288,336	-		AO353_14855	0.16	-1.9
3,288,336	-		AO353_14855	0.16	-0.3
3,288,336	-		AO353_14855	0.16	+0.5
3,288,336	-		AO353_14855	0.16	+1.4
3,288,336	-		AO353_14855	0.16	+0.9
3,288,336	-		AO353_14855	0.16	+0.2
3,288,336	-		AO353_14855	0.16	-0.0
3,288,336	-		AO353_14855	0.16	-0.9
3,288,336	-		AO353_14855	0.16	+0.5
3,288,336	-		AO353_14855	0.16	-0.5
3,288,365	-		AO353_14855	0.21	+0.6
3,288,533	+		AO353_14855	0.47	+0.8
3,288,533	+		AO353_14855	0.47	+1.2
3,288,533	+		AO353_14855	0.47	-2.3
3,288,533	+		AO353_14855	0.47	-1.3
3,288,533	+		AO353_14855	0.47	-0.6
3,288,533	+		AO353_14855	0.47	+0.7
3,288,533	+		AO353_14855	0.47	+1.8
3,288,533	+		AO353_14855	0.47	-0.8
3,288,533	+		AO353_14855	0.47	-1.0
3,288,533	+		AO353_14855	0.47	+1.2
3,288,533	+		AO353_14855	0.47	-1.4
3,288,533	+		AO353_14855	0.47	+2.6
3,288,534	-		AO353_14855	0.47	-0.2
3,288,658	-		AO353_14855	0.67	+2.9
3,288,658	-		AO353_14855	0.67	+2.1
3,288,716	+		AO353_14855	0.76	-2.0
3,288,716	+		AO353_14855	0.76	+0.2
3,288,716	+		AO353_14855	0.76	+2.8
3,288,716	+		AO353_14855	0.76	+1.3
3,288,716	+		AO353_14855	0.76	+2.2
3,288,716	+		AO353_14855	0.76	+2.1
3,288,716	+		AO353_14855	0.76	+0.2
3,288,716	+		AO353_14855	0.76	-0.3
3,288,716	+		AO353_14855	0.76	+0.5
3,288,717	-		AO353_14855	0.76	+0.2
3,288,717	-		AO353_14855	0.76	-0.6
3,288,717	-		AO353_14855	0.76	+0.9
3,288,717	-		AO353_14855	0.76	-2.6
3,288,749	+		AO353_14855	0.81	+1.2
3,288,749	+		AO353_14855	0.81	-0.2
3,288,749	+		AO353_14855	0.81	-2.4
3,288,750	-		AO353_14855	0.81	+1.3
3,288,801	+		AO353_14855	0.89	-0.4
3,288,820	-				-0.9
3,288,907	+				+0.2
3,288,907	+				+3.8
3,288,907	+				-0.7
3,288,907	+				+2.9
3,288,908	-				+0.1
3,288,908	-				-0.6
3,288,912	+				-0.2
3,288,913	-				+1.6
3,288,913	-				-1.0
3,288,913	-				+3.3
3,288,913	-				-0.2
3,288,913	-				-1.8
3,288,913	-				+0.9
3,288,917	+				+0.2
3,288,917	+				-1.0
3,288,918	-				-0.5
3,288,918	-				+2.1
3,288,936	-				+0.4
3,288,936	-				-0.3
3,288,936	-				+1.8
3,288,937	+				+0.6
3,288,937	+				-1.5
3,288,937	+				+0.4
3,288,938	-				-1.1
3,288,938	-				-1.5
3,288,938	-				+0.8
3,288,938	-				-1.3
3,288,938	-				-2.1
3,288,938	-				-2.5
3,288,938	-				+0.4
3,288,938	-				+1.1
3,288,943	+				+0.8
3,288,943	+				-0.2
3,288,943	+				-0.3
3,288,943	+				-1.3
3,288,943	+				-0.7
3,288,943	+				+1.0
3,288,943	+				-0.2
3,288,943	+				+0.1
3,288,943	+				+2.2
3,288,943	+				-0.2
3,288,943	+				-0.4
3,288,943	+				-0.4
3,288,943	+				-1.1
3,288,943	+				+2.1
3,288,943	+				-0.5
3,288,943	+				+2.7
3,288,943	+				-0.4
3,288,943	+				+0.7
3,288,943	+				+0.9
3,288,943	+				-0.9
3,288,943	+				+0.9
3,288,943	+				+1.0
3,288,943	+				-0.5
3,288,943	+				-0.8
3,288,944	-				-0.2
3,288,944	-				-3.2
3,288,944	-				-1.3
3,288,944	-				+0.5
3,288,944	-				-0.6
3,288,944	-				-1.4
3,288,944	-				-0.9
3,288,944	-				+2.2
3,288,944	-				+0.6
3,288,944	-				-0.3
3,288,944	-				+1.9
3,288,944	-				-1.4
3,288,944	-				-1.9
3,288,944	-				-1.0
3,288,944	-				-0.7
3,288,944	-				+1.1
3,288,944	-				+0.7
3,288,944	-				-1.1
3,288,944	-				+0.4
3,288,948	+				+1.9
3,288,948	+				-1.6
3,288,948	+				+0.3
3,288,948	+				+0.7
3,288,948	+				+0.2
3,288,948	+				-0.7
3,288,948	+				+1.6
3,288,948	+				-0.0
3,288,948	+				+0.5
3,288,949	-				+0.2
3,288,949	-				-1.3
3,288,949	-				-0.2
3,288,949	-				-0.0
3,288,949	-				-1.6
3,288,949	-				+0.3
3,288,949	-				-0.2
3,288,949	-				+2.6
3,288,949	-				+1.0
3,288,990	+				+1.0
3,288,990	+				+0.5
3,288,990	+				+2.6
3,288,991	-				+0.2
3,288,991	-				+0.3
3,289,056	+				-1.7
3,289,090	+				+2.0
3,289,090	+				+1.3
3,289,158	+		AO353_14860	0.22	+0.5
3,289,249	+		AO353_14860	0.38	+1.6
3,289,249	+		AO353_14860	0.38	+1.0
3,289,249	+		AO353_14860	0.38	-1.0
3,289,250	-		AO353_14860	0.38	-0.0
3,289,250	-		AO353_14860	0.38	-0.5
3,289,250	-		AO353_14860	0.38	-0.2
3,289,516	+		AO353_14860	0.86	+0.5
3,289,516	+		AO353_14860	0.86	-1.4
3,289,516	+		AO353_14860	0.86	-2.4
3,289,540	+				+0.2
3,289,540	+				-0.6
3,289,540	+				+1.1
3,289,540	+				+2.2
3,289,540	+				+0.8
3,289,540	+				-0.5
3,289,540	+				-0.0
3,289,540	+				-2.4
3,289,540	+				-0.9
3,289,541	-				-1.4
3,289,541	-				-0.7
3,289,541	-				+0.2
3,289,550	-				-1.5
3,289,573	+				+1.1
3,289,573	+				-1.4
3,289,573	+				+0.7
3,289,573	+				-1.8
3,289,573	+				-1.5
3,289,574	-				-2.0
3,289,574	-				-0.5
3,289,591	+				+0.2
3,289,591	+				+1.6
3,289,591	+				+0.9
3,289,591	+				-1.3
3,289,591	+				-2.0
3,289,591	+				+0.2
3,289,591	+				-2.3
3,289,591	+				+0.4
3,289,591	+				+1.4
3,289,591	+				+0.1
3,289,591	+				+2.2
3,289,591	+				-0.5
3,289,591	+				-2.0
3,289,591	+				+0.4
3,289,592	-				+0.9
3,289,592	-				+0.4
3,289,592	-				+0.8
3,289,592	-				-1.6
3,289,592	-				+1.4
3,289,592	-				-1.1
3,289,592	-				-1.0
3,289,592	-				-0.6
3,289,632	+				+1.1
3,289,717	-		AO353_14865	0.25	-0.9
3,289,744	+		AO353_14865	0.31	+1.1
3,289,744	+		AO353_14865	0.31	+3.7
3,289,744	+		AO353_14865	0.31	-2.0
3,289,745	-		AO353_14865	0.31	-2.0
3,289,745	-		AO353_14865	0.31	-1.0
3,289,745	-		AO353_14865	0.31	+2.3
3,289,745	-		AO353_14865	0.31	-0.6
3,289,745	-		AO353_14865	0.31	-1.4
3,289,745	-		AO353_14865	0.31	-0.2